EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015004895 (Gene tree)
Gene ID: 108935473
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 19936 bases
Position: chrKV411101.1:3675064-3694999
Accession: 108935473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015007422	PIN_4	PF13638.6	3.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007532	-	4956	XM_018754087	ENSSFOP00015007422	962 (aa)	XP_018609603	A0A1W5A8G4

Gene Model

Click here to download ENSSFOG00015004895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004895	swt1	57	38.664	ENSG00000116668	SWT1	62	38.664	Homo_sapiens
ENSSFOG00015004895	swt1	57	47.119	ENSAPOG00000014897	-	60	47.119	Acanthochromis_polyacanthus
ENSSFOG00015004895	swt1	57	39.719	ENSAMEG00000013585	SWT1	62	39.719	Ailuropoda_melanoleuca
ENSSFOG00015004895	swt1	57	45.791	ENSAOCG00000013932	swt1	60	45.791	Amphiprion_ocellaris
ENSSFOG00015004895	swt1	57	45.868	ENSAPEG00000009613	-	60	45.960	Amphiprion_percula
ENSSFOG00015004895	swt1	57	50.085	ENSATEG00000018946	swt1	59	50.085	Anabas_testudineus
ENSSFOG00015004895	swt1	57	40.559	ENSAPLG00000008607	SWT1	76	40.559	Anas_platyrhynchos
ENSSFOG00015004895	swt1	55	37.500	ENSACAG00000002276	SWT1	62	37.500	Anolis_carolinensis
ENSSFOG00015004895	swt1	59	37.688	ENSANAG00000027068	SWT1	65	37.688	Aotus_nancymaae
ENSSFOG00015004895	swt1	54	48.288	ENSACLG00000009742	swt1	67	48.370	Astatotilapia_calliptera
ENSSFOG00015004895	swt1	56	55.759	ENSAMXG00000010971	swt1	57	55.759	Astyanax_mexicanus
ENSSFOG00015004895	swt1	59	37.081	ENSCJAG00000005544	SWT1	65	37.081	Callithrix_jacchus
ENSSFOG00015004895	swt1	57	39.367	ENSCAFG00000013543	SWT1	61	39.925	Canis_familiaris
ENSSFOG00015004895	swt1	57	39.367	ENSCAFG00020015648	SWT1	66	39.719	Canis_lupus_dingo
ENSSFOG00015004895	swt1	57	39.437	ENSCHIG00000023511	SWT1	96	38.581	Capra_hircus
ENSSFOG00015004895	swt1	57	39.085	ENSTSYG00000010470	SWT1	62	39.085	Carlito_syrichta
ENSSFOG00015004895	swt1	51	38.953	ENSCPOG00000014251	SWT1	63	38.953	Cavia_porcellus
ENSSFOG00015004895	swt1	59	36.975	ENSCCAG00000033926	SWT1	65	36.975	Cebus_capucinus
ENSSFOG00015004895	swt1	57	38.529	ENSCATG00000042210	SWT1	95	38.529	Cercocebus_atys
ENSSFOG00015004895	swt1	57	39.341	ENSCLAG00000013959	SWT1	62	39.789	Chinchilla_lanigera
ENSSFOG00015004895	swt1	57	38.153	ENSCSAG00000012895	SWT1	62	37.979	Chlorocebus_sabaeus
ENSSFOG00015004895	swt1	57	41.248	ENSCPBG00000015691	SWT1	62	41.248	Chrysemys_picta_bellii
ENSSFOG00015004895	swt1	57	38.313	ENSCANG00000032207	SWT1	95	38.313	Colobus_angolensis_palliatus
ENSSFOG00015004895	swt1	57	39.825	ENSCGRG00001022955	Swt1	65	40.175	Cricetulus_griseus_chok1gshd
ENSSFOG00015004895	swt1	57	39.825	ENSCGRG00000010224	Swt1	63	40.175	Cricetulus_griseus_crigri
ENSSFOG00015004895	swt1	57	46.496	ENSCSEG00000017352	swt1	76	46.496	Cynoglossus_semilaevis
ENSSFOG00015004895	swt1	56	55.091	ENSDARG00000094010	swt1	56	55.091	Danio_rerio
ENSSFOG00015004895	swt1	57	39.719	ENSDORG00000010531	Swt1	67	39.719	Dipodomys_ordii
ENSSFOG00015004895	swt1	57	38.811	ENSEASG00005005530	SWT1	66	38.811	Equus_asinus_asinus
ENSSFOG00015004895	swt1	57	39.787	ENSECAG00000012085	SWT1	65	39.787	Equus_caballus
ENSSFOG00015004895	swt1	92	40.829	ENSELUG00000020565	swt1	93	41.572	Esox_lucius
ENSSFOG00015004895	swt1	57	39.895	ENSFCAG00000011286	SWT1	62	40.422	Felis_catus
ENSSFOG00015004895	swt1	57	39.719	ENSFALG00000003206	SWT1	63	39.719	Ficedula_albicollis
ENSSFOG00015004895	swt1	56	40.320	ENSFDAG00000007569	SWT1	62	40.320	Fukomys_damarensis
ENSSFOG00015004895	swt1	57	40.799	ENSGALG00000034230	SWT1	65	41.125	Gallus_gallus
ENSSFOG00015004895	swt1	55	46.771	ENSGAFG00000007803	-	58	46.853	Gambusia_affinis
ENSSFOG00015004895	swt1	57	39.894	ENSGAGG00000025050	SWT1	97	39.787	Gopherus_agassizii
ENSSFOG00015004895	swt1	51	38.596	ENSGGOG00000041167	-	92	38.596	Gorilla_gorilla
ENSSFOG00015004895	swt1	56	48.199	ENSHBUG00000006188	swt1	68	48.193	Haplochromis_burtoni
ENSSFOG00015004895	swt1	56	40.714	ENSHGLG00000006542	SWT1	65	40.714	Heterocephalus_glaber_female
ENSSFOG00015004895	swt1	56	40.893	ENSHGLG00100014408	SWT1	63	40.893	Heterocephalus_glaber_male
ENSSFOG00015004895	swt1	57	39.719	ENSSTOG00000010356	SWT1	63	39.719	Ictidomys_tridecemlineatus
ENSSFOG00015004895	swt1	57	37.871	ENSJJAG00000015927	Swt1	65	37.852	Jaculus_jaculus
ENSSFOG00015004895	swt1	55	48.057	ENSKMAG00000012533	swt1	57	48.057	Kryptolebias_marmoratus
ENSSFOG00015004895	swt1	55	47.872	ENSLBEG00000020663	-	57	47.872	Labrus_bergylta
ENSSFOG00015004895	swt1	56	44.544	ENSLACG00000009194	SWT1	80	44.544	Latimeria_chalumnae
ENSSFOG00015004895	swt1	55	53.986	ENSLOCG00000001749	swt1	100	51.724	Lepisosteus_oculatus
ENSSFOG00015004895	swt1	57	38.004	ENSLAFG00000004346	-	96	38.004	Loxodonta_africana
ENSSFOG00015004895	swt1	57	38.179	ENSMFAG00000031793	SWT1	96	38.179	Macaca_fascicularis
ENSSFOG00015004895	swt1	59	36.667	ENSMMUG00000013882	SWT1	98	37.031	Macaca_mulatta
ENSSFOG00015004895	swt1	57	38.179	ENSMNEG00000035502	SWT1	96	38.179	Macaca_nemestrina
ENSSFOG00015004895	swt1	57	39.016	ENSMLEG00000038692	SWT1	95	38.704	Mandrillus_leucophaeus
ENSSFOG00015004895	swt1	56	48.027	ENSMZEG00005018489	swt1	68	48.021	Maylandia_zebra
ENSSFOG00015004895	swt1	57	39.696	ENSMGAG00000000973	SWT1	96	39.696	Meleagris_gallopavo
ENSSFOG00015004895	swt1	57	36.804	ENSMAUG00000007996	Swt1	59	36.804	Mesocricetus_auratus
ENSSFOG00015004895	swt1	57	39.367	ENSMICG00000014975	SWT1	62	39.367	Microcebus_murinus
ENSSFOG00015004895	swt1	57	39.085	ENSMOCG00000009776	Swt1	62	39.085	Microtus_ochrogaster
ENSSFOG00015004895	swt1	57	40.208	ENSMODG00000007472	SWT1	64	39.152	Monodelphis_domestica
ENSSFOG00015004895	swt1	91	38.298	ENSMALG00000019308	swt1	92	38.298	Monopterus_albus
ENSSFOG00015004895	swt1	57	40.526	MGP_CAROLIEiJ_G0014692	Swt1	65	50.617	Mus_caroli
ENSSFOG00015004895	swt1	57	39.543	ENSMUSG00000052748	Swt1	65	49.383	Mus_musculus
ENSSFOG00015004895	swt1	57	40.000	MGP_PahariEiJ_G0027928	Swt1	65	50.000	Mus_pahari
ENSSFOG00015004895	swt1	57	39.895	MGP_SPRETEiJ_G0015499	Swt1	65	50.000	Mus_spretus
ENSSFOG00015004895	swt1	57	40.949	ENSMPUG00000011913	SWT1	62	41.125	Mustela_putorius_furo
ENSSFOG00015004895	swt1	58	38.860	ENSMLUG00000001142	SWT1	62	38.860	Myotis_lucifugus
ENSSFOG00015004895	swt1	57	38.947	ENSNGAG00000021080	Swt1	64	38.319	Nannospalax_galili
ENSSFOG00015004895	swt1	57	38.732	ENSNLEG00000018031	SWT1	62	38.732	Nomascus_leucogenys
ENSSFOG00015004895	swt1	56	47.500	ENSONIG00000009994	swt1	97	47.037	Oreochromis_niloticus
ENSSFOG00015004895	swt1	57	38.554	ENSOANG00000001013	-	72	38.554	Ornithorhynchus_anatinus
ENSSFOG00015004895	swt1	57	38.840	ENSOCUG00000004901	SWT1	63	38.840	Oryctolagus_cuniculus
ENSSFOG00015004895	swt1	56	47.049	ENSORLG00000009682	swt1	59	47.049	Oryzias_latipes
ENSSFOG00015004895	swt1	56	47.569	ENSORLG00020011654	swt1	59	47.569	Oryzias_latipes_hni
ENSSFOG00015004895	swt1	56	46.701	ENSORLG00015007734	swt1	59	46.701	Oryzias_latipes_hsok
ENSSFOG00015004895	swt1	55	47.803	ENSOMEG00000006607	swt1	57	47.803	Oryzias_melastigma
ENSSFOG00015004895	swt1	57	38.489	ENSOGAG00000016195	SWT1	62	38.664	Otolemur_garnettii
ENSSFOG00015004895	swt1	57	39.161	ENSOARG00000004156	SWT1	61	39.161	Ovis_aries
ENSSFOG00015004895	swt1	57	38.664	ENSPPAG00000021400	SWT1	62	38.664	Pan_paniscus
ENSSFOG00015004895	swt1	57	40.070	ENSPPRG00000023754	SWT1	62	40.070	Panthera_pardus
ENSSFOG00015004895	swt1	57	40.070	ENSPTIG00000021889	SWT1	62	40.070	Panthera_tigris_altaica
ENSSFOG00015004895	swt1	57	38.840	ENSPTRG00000001777	SWT1	62	38.840	Pan_troglodytes
ENSSFOG00015004895	swt1	57	39.054	ENSPANG00000005099	SWT1	95	38.354	Papio_anubis
ENSSFOG00015004895	swt1	97	46.195	ENSPKIG00000005979	swt1	89	47.072	Paramormyrops_kingsleyae
ENSSFOG00015004895	swt1	57	41.331	ENSPSIG00000008961	SWT1	62	41.021	Pelodiscus_sinensis
ENSSFOG00015004895	swt1	57	40.070	ENSPEMG00000008208	Swt1	62	40.244	Peromyscus_maniculatus_bairdii
ENSSFOG00015004895	swt1	57	39.761	ENSPCIG00000002443	SWT1	62	39.761	Phascolarctos_cinereus
ENSSFOG00015004895	swt1	61	41.321	ENSPFOG00000010988	-	75	41.321	Poecilia_formosa
ENSSFOG00015004895	swt1	55	45.979	ENSPLAG00000022908	-	58	46.060	Poecilia_latipinna
ENSSFOG00015004895	swt1	55	45.965	ENSPMEG00000006943	-	58	46.046	Poecilia_mexicana
ENSSFOG00015004895	swt1	57	38.840	ENSPPYG00000000415	SWT1	62	38.840	Pongo_abelii
ENSSFOG00015004895	swt1	51	44.118	ENSPCAG00000008337	SWT1	55	44.118	Procavia_capensis
ENSSFOG00015004895	swt1	57	37.809	ENSPVAG00000005968	SWT1	62	37.809	Pteropus_vampyrus
ENSSFOG00015004895	swt1	56	48.199	ENSPNYG00000012934	swt1	68	48.193	Pundamilia_nyererei
ENSSFOG00015004895	swt1	57	56.766	ENSPNAG00000017795	swt1	58	56.766	Pygocentrus_nattereri
ENSSFOG00015004895	swt1	57	40.208	ENSRNOG00000032258	Swt1	64	40.381	Rattus_norvegicus
ENSSFOG00015004895	swt1	57	36.620	ENSRBIG00000040630	SWT1	95	36.620	Rhinopithecus_bieti
ENSSFOG00015004895	swt1	59	37.311	ENSSBOG00000028825	SWT1	64	37.565	Saimiri_boliviensis_boliviensis
ENSSFOG00015004895	swt1	57	39.583	ENSSHAG00000009241	SWT1	62	39.583	Sarcophilus_harrisii
ENSSFOG00015004895	swt1	55	48.587	ENSSDUG00000012345	swt1	58	48.940	Seriola_dumerili
ENSSFOG00015004895	swt1	55	48.057	ENSSLDG00000003821	swt1	58	48.410	Seriola_lalandi_dorsalis
ENSSFOG00015004895	swt1	57	41.043	ENSSPUG00000003899	SWT1	62	41.043	Sphenodon_punctatus
ENSSFOG00015004895	swt1	59	45.242	ENSSPAG00000001030	swt1	65	45.242	Stegastes_partitus
ENSSFOG00015004895	swt1	58	39.410	ENSSSCG00000015569	SWT1	64	39.757	Sus_scrofa
ENSSFOG00015004895	swt1	56	40.813	ENSTGUG00000003718	-	100	40.813	Taeniopygia_guttata
ENSSFOG00015004895	swt1	57	48.932	ENSTRUG00000006420	swt1	62	48.932	Takifugu_rubripes
ENSSFOG00015004895	swt1	57	37.500	ENSTTRG00000005914	SWT1	62	37.500	Tursiops_truncatus
ENSSFOG00015004895	swt1	57	40.070	ENSUAMG00000020937	SWT1	67	40.070	Ursus_americanus
ENSSFOG00015004895	swt1	57	40.070	ENSUMAG00000021918	SWT1	62	40.598	Ursus_maritimus
ENSSFOG00015004895	swt1	57	39.367	ENSVVUG00000009182	SWT1	64	39.367	Vulpes_vulpes
ENSSFOG00015004895	swt1	56	46.154	ENSXMAG00000023472	-	60	46.233	Xiphophorus_maculatus