EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015004941 (Gene tree)
Gene ID
108923147
Gene Symbol
rab41
Alias
wu:fi30c11|zgc:63637
Full Name
RAB41%2C member RAS oncogene family
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
8200 bases
Position
chrKV410820.1:4630830-4639029
Accession
108923147
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015007536MMR_HSR1PF01926.238.7e-0511
ENSSFOP00015007571MMR_HSR1PF01926.239e-0511
ENSSFOP00015007557MMR_HSR1PF01926.230.0001211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015007668-2702XM_018733708ENSSFOP00015007557215 (aa)XP_018589224A0A1W4YC77
ENSSFOT00015007647-2702XM_018733706ENSSFOP00015007536215 (aa)XP_018589222A0A1W4YCE4
ENSSFOT00015007682-2702XM_018733707ENSSFOP00015007571215 (aa)XP_018589223A0A1W4YLI4
Gene Model
Click here to download ENSSFOG00015004941's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004941's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015004941rab417339.506ENSSFOG00015016156rab366339.506
ENSSFOG00015004941rab417240.260ENSSFOG00015006076rab357640.260
ENSSFOG00015004941rab419136.408ENSSFOG00015020732rab42a9736.408
ENSSFOG00015004941rab417330.128ENSSFOG00015020738rabl26730.519
ENSSFOG00015004941rab417340.506ENSSFOG00015012785rab147340.506
ENSSFOG00015004941rab419137.000ENSSFOG00015021180RAB7A9637.000
ENSSFOG00015004941rab417838.596ENSSFOG00015017444rab18a7038.596
ENSSFOG00015004941rab417844.643ENSSFOG00015009988-8940.306
ENSSFOG00015004941rab417332.911ENSSFOG00015006846-8332.911
ENSSFOG00015004941rab417341.509ENSSFOG00015018421rab39b7541.509
ENSSFOG00015004941rab416933.557ENSSFOG00015003051hrasb8332.911
ENSSFOG00015004941rab417835.119ENSSFOG00015008657rab25a7637.267
ENSSFOG00015004941rab417630.723ENSSFOG00015020319mras8430.899
ENSSFOG00015004941rab417240.260ENSSFOG00015021448-7340.260
ENSSFOG00015004941rab417342.038ENSSFOG00015017296rab157442.038
ENSSFOG00015004941rab417540.373ENSSFOG00015005464zgc:1719277640.373
ENSSFOG00015004941rab417437.059ENSSFOG00015000053rab9a7737.059
ENSSFOG00015004941rab418137.714ENSSFOG00015015336rab4a8237.714
ENSSFOG00015004941rab417346.203ENSSFOG00015021754rab137946.203
ENSSFOG00015004941rab417240.881ENSSFOG00015012088rab427140.881
ENSSFOG00015004941rab417940.588ENSSFOG00015012085rab22a8840.588
ENSSFOG00015004941rab419037.688ENSSFOG00015000865-9137.688
ENSSFOG00015004941rab417332.099ENSSFOG00015008777rasd37431.250
ENSSFOG00015004941rab419688.835ENSSFOG00015002077rab6a9889.655
ENSSFOG00015004941rab417841.618ENSSFOG00015004253rab33a7741.618
ENSSFOG00015004941rab419036.408ENSSFOG00015010492rab9b9736.408
ENSSFOG00015004941rab419540.580ENSSFOG00015021115-9340.887
ENSSFOG00015004941rab419136.946ENSSFOG00015011771-9636.946
ENSSFOG00015004941rab417040.523ENSSFOG00015006175zgc:1015596640.523
ENSSFOG00015004941rab418233.520ENSSFOG00015014992rhebl19733.520
ENSSFOG00015004941rab417336.943ENSSFOG00015024042rab11a7336.943
ENSSFOG00015004941rab419035.678ENSSFOG00015006414-9535.678
ENSSFOG00015004941rab417243.949ENSSFOG00015003628-7443.949
ENSSFOG00015004941rab419588.780ENSSFOG00015019202RAB6B9889.163
ENSSFOG00015004941rab417644.643ENSSFOG00015020112rab33b7744.643
ENSSFOG00015004941rab418633.503ENSSFOG00015009042rab11bb8933.503
ENSSFOG00015004941rab419139.303ENSSFOG00015011140-9438.889
ENSSFOG00015004941rab418044.186ENSSFOG00015014517rab5a7844.643
ENSSFOG00015004941rab419136.500ENSSFOG00015020012rab7a9636.500
ENSSFOG00015004941rab417340.506ENSSFOG00015011318-7340.506
ENSSFOG00015004941rab417335.366ENSSFOG00015003259rab9a7635.366
ENSSFOG00015004941rab416942.667ENSSFOG00015024034rab33ba7241.379
ENSSFOG00015004941rab419033.171ENSSFOG00015008618rab11al9433.171
ENSSFOG00015004941rab419132.338ENSSFOG00015009566si:dkey-13a21.49732.338
ENSSFOG00015004941rab419137.949ENSSFOG00015020836rab1ba9637.949
ENSSFOG00015004941rab418439.779ENSSFOG00015015034rab2a8339.779
ENSSFOG00015004941rab417241.250ENSSFOG00015016000-7341.250
ENSSFOG00015004941rab417335.669ENSSFOG00015023790rheb9433.333
ENSSFOG00015004941rab417537.037ENSSFOG00015012604rab238437.356
ENSSFOG00015004941rab418235.484ENSSFOG00015005188rab347235.484
ENSSFOG00015004941rab419696.602ENSSFOG00015011268RAB419896.602
ENSSFOG00015004941rab417340.994ENSSFOG00015004325rab34a6240.994
ENSSFOG00015004941rab417530.539ENSSFOG00015014423rras28132.432
ENSSFOG00015004941rab419135.961ENSSFOG00015005076zgc:1009189635.961
ENSSFOG00015004941rab417332.911ENSSFOG00015023903KRAS8332.911
ENSSFOG00015004941rab417333.544ENSSFOG00015011157-8333.544
ENSSFOG00015004941rab417531.325ENSSFOG00015004613rasd47931.515
ENSSFOG00015004941rab419139.303ENSSFOG00015001293rab1ab9638.889
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015004941rab419588.780ENSG00000175582RAB6A9796.610Homo_sapiens
ENSSFOG00015004941rab4110094.419ENSAPOG00000005731rab6a9696.552Acanthochromis_polyacanthus
ENSSFOG00015004941rab419688.350ENSAMEG00000017285RAB6A8088.670Ailuropoda_melanoleuca
ENSSFOG00015004941rab419588.780ENSACIG00000014605rab6a9889.163Amphilophus_citrinellus
ENSSFOG00015004941rab419689.320ENSAOCG00000012277-9890.148Amphiprion_ocellaris
ENSSFOG00015004941rab419589.756ENSATEG00000012459-9890.148Anabas_testudineus
ENSSFOG00015004941rab4110094.419ENSATEG00000015992rab419696.552Anabas_testudineus
ENSSFOG00015004941rab4110091.628ENSACAG00000015304-9493.103Anolis_carolinensis
ENSSFOG00015004941rab419688.350ENSANAG00000036364RAB6A9888.670Aotus_nancymaae
ENSSFOG00015004941rab4110094.419ENSACLG00000019423rab419696.552Astatotilapia_calliptera
ENSSFOG00015004941rab4110085.581ENSAMXG00000033216rab419687.192Astyanax_mexicanus
ENSSFOG00015004941rab419589.216ENSAMXG00000032547rab6a9889.163Astyanax_mexicanus
ENSSFOG00015004941rab419688.350ENSBTAG00000000025RAB6A9888.670Bos_taurus
ENSSFOG00015004941rab418284.270WBGene00004269rab-6.18784.270Caenorhabditis_elegans
ENSSFOG00015004941rab419688.350ENSCJAG00000039039RAB6A9888.670Callithrix_jacchus
ENSSFOG00015004941rab419687.864ENSCAFG00000028870RAB6A9888.177Canis_familiaris
ENSSFOG00015004941rab419688.350ENSCAFG00020002206RAB6A9888.670Canis_lupus_dingo
ENSSFOG00015004941rab419688.350ENSCHIG00000023957RAB6A9888.670Capra_hircus
ENSSFOG00015004941rab419688.835ENSTSYG00000013951RAB6A9889.163Carlito_syrichta
ENSSFOG00015004941rab419688.350ENSCATG00000012428RAB6A9888.670Cercocebus_atys
ENSSFOG00015004941rab419688.835ENSCLAG00000015536RAB6A9889.163Chinchilla_lanigera
ENSSFOG00015004941rab419688.350ENSCSAG00000004062RAB6A9888.670Chlorocebus_sabaeus
ENSSFOG00015004941rab419677.670ENSCHOG00000000992RAB6A9777.833Choloepus_hoffmanni
ENSSFOG00015004941rab419589.268ENSCPBG00000000041RAB6A9889.163Chrysemys_picta_bellii
ENSSFOG00015004941rab419483.495ENSCING00000002960-9983.495Ciona_intestinalis
ENSSFOG00015004941rab419483.495ENSCSAVG00000009128-9983.495Ciona_savignyi
ENSSFOG00015004941rab419688.350ENSCANG00000029094RAB6A9888.670Colobus_angolensis_palliatus
ENSSFOG00015004941rab419688.350ENSCGRG00001018153Rab6a9888.670Cricetulus_griseus_chok1gshd
ENSSFOG00015004941rab4110093.953ENSCSEG00000004941rab419696.059Cynoglossus_semilaevis
ENSSFOG00015004941rab4110094.419ENSCVAG00000001618rab419696.552Cyprinodon_variegatus
ENSSFOG00015004941rab419689.320ENSCVAG00000022249rab6a9890.148Cyprinodon_variegatus
ENSSFOG00015004941rab4110094.419ENSDARG00000029885rab419696.552Danio_rerio
ENSSFOG00015004941rab419688.350ENSDARG00000103714rab6a9889.163Danio_rerio
ENSSFOG00015004941rab419688.350ENSDNOG00000042746RAB6A9888.670Dasypus_novemcinctus
ENSSFOG00015004941rab419688.835ENSDORG00000027784Rab6a9889.163Dipodomys_ordii
ENSSFOG00015004941rab419584.390FBgn0015797Rab69884.314Drosophila_melanogaster
ENSSFOG00015004941rab419666.990ENSETEG00000009412-9966.990Echinops_telfairi
ENSSFOG00015004941rab419688.350ENSEASG00005017944RAB6A9888.670Equus_asinus_asinus
ENSSFOG00015004941rab419688.350ENSECAG00000022694-9888.670Equus_caballus
ENSSFOG00015004941rab419690.291ENSELUG00000008876rab6a9891.133Esox_lucius
ENSSFOG00015004941rab419688.350ENSFCAG00000023834RAB6A9888.670Felis_catus
ENSSFOG00015004941rab419589.268ENSFALG00000008011RAB6A9889.163Ficedula_albicollis
ENSSFOG00015004941rab419688.835ENSFDAG00000010948-9889.163Fukomys_damarensis
ENSSFOG00015004941rab4110093.953ENSGMOG00000004095rab419696.059Gadus_morhua
ENSSFOG00015004941rab419688.835ENSGALG00000017320RAB6A9889.163Gallus_gallus
ENSSFOG00015004941rab419893.333ENSGALG00000026278-9694.581Gallus_gallus
ENSSFOG00015004941rab4110093.488ENSGAFG00000019872rab419695.567Gambusia_affinis
ENSSFOG00015004941rab419689.320ENSGAFG00000006356rab6a9890.148Gambusia_affinis
ENSSFOG00015004941rab4110094.419ENSGACG00000017153rab419696.552Gasterosteus_aculeatus
ENSSFOG00015004941rab419588.293ENSGACG00000020356rab6a9888.670Gasterosteus_aculeatus
ENSSFOG00015004941rab419589.268ENSGAGG00000021701RAB6A9889.163Gopherus_agassizii
ENSSFOG00015004941rab419588.780ENSGGOG00000010610RAB6A9888.670Gorilla_gorilla
ENSSFOG00015004941rab419589.756ENSHBUG00000000890rab6a9890.148Haplochromis_burtoni
ENSSFOG00015004941rab419688.835ENSHGLG00000008829-9889.163Heterocephalus_glaber_female
ENSSFOG00015004941rab419687.864ENSHGLG00100014550-9888.177Heterocephalus_glaber_male
ENSSFOG00015004941rab419589.268ENSHCOG00000006550-9889.655Hippocampus_comes
ENSSFOG00015004941rab4110093.953ENSHCOG00000004404rab419696.059Hippocampus_comes
ENSSFOG00015004941rab4110094.884ENSIPUG00000019382rab419697.044Ictalurus_punctatus
ENSSFOG00015004941rab419587.805ENSIPUG00000021740rab6a9888.177Ictalurus_punctatus
ENSSFOG00015004941rab419688.350ENSSTOG00000023497RAB6A9888.670Ictidomys_tridecemlineatus
ENSSFOG00015004941rab417692.683ENSKMAG00000013146-8493.789Kryptolebias_marmoratus
ENSSFOG00015004941rab419688.350ENSLBEG00000003748rab6a9889.163Labrus_bergylta
ENSSFOG00015004941rab419690.291ENSLACG00000005168RAB6A9890.640Latimeria_chalumnae
ENSSFOG00015004941rab419694.686ENSLACG00000013980rab419694.581Latimeria_chalumnae
ENSSFOG00015004941rab419697.087ENSLOCG00000015191rab419897.087Lepisosteus_oculatus
ENSSFOG00015004941rab419688.350ENSMFAG00000041027RAB6A9888.670Macaca_fascicularis
ENSSFOG00015004941rab419688.350ENSMNEG00000029216RAB6A9888.670Macaca_nemestrina
ENSSFOG00015004941rab419688.350ENSMLEG00000038771RAB6A9888.670Mandrillus_leucophaeus
ENSSFOG00015004941rab4110093.488ENSMAMG00000020859rab419695.567Mastacembelus_armatus
ENSSFOG00015004941rab419589.756ENSMAMG00000012488rab6a9890.148Mastacembelus_armatus
ENSSFOG00015004941rab419589.756ENSMZEG00005023181rab6a9890.148Maylandia_zebra
ENSSFOG00015004941rab419688.350ENSMICG00000031565RAB6A9888.670Microcebus_murinus
ENSSFOG00015004941rab419688.350ENSMOCG00000014387Rab6a9888.670Microtus_ochrogaster
ENSSFOG00015004941rab419395.477ENSMMOG00000001992rab418597.861Mola_mola
ENSSFOG00015004941rab419688.350ENSMMOG00000016209rab6a9889.163Mola_mola
ENSSFOG00015004941rab419688.835ENSMODG00000007600RAB6A9889.163Monodelphis_domestica
ENSSFOG00015004941rab4110094.419ENSMALG00000010549rab419696.552Monopterus_albus
ENSSFOG00015004941rab419587.805ENSMALG00000020364-9888.177Monopterus_albus
ENSSFOG00015004941rab419688.350MGP_CAROLIEiJ_G0030051Rab6a9888.670Mus_caroli
ENSSFOG00015004941rab419688.350ENSMUSG00000030704Rab6a9888.670Mus_musculus
ENSSFOG00015004941rab419688.350MGP_PahariEiJ_G0013273Rab6a9888.670Mus_pahari
ENSSFOG00015004941rab419688.350MGP_SPRETEiJ_G0031162Rab6a9888.670Mus_spretus
ENSSFOG00015004941rab419688.350ENSMPUG00000009724RAB6A9888.670Mustela_putorius_furo
ENSSFOG00015004941rab419687.864ENSNGAG00000014566Rab6a9888.177Nannospalax_galili
ENSSFOG00015004941rab4110094.419ENSNBRG00000022702rab419696.552Neolamprologus_brichardi
ENSSFOG00015004941rab419589.756ENSNBRG00000016716rab6a9890.148Neolamprologus_brichardi
ENSSFOG00015004941rab419688.350ENSNLEG00000017098RAB6A9888.670Nomascus_leucogenys
ENSSFOG00015004941rab419688.835ENSMEUG00000010026RAB6A9889.163Notamacropus_eugenii
ENSSFOG00015004941rab418791.444ENSOPRG00000010355RAB6A9791.848Ochotona_princeps
ENSSFOG00015004941rab419688.835ENSODEG00000005942RAB6A9889.163Octodon_degus
ENSSFOG00015004941rab419588.293ENSONIG00000004394rab6a9888.670Oreochromis_niloticus
ENSSFOG00015004941rab419688.350ENSOCUG00000009297RAB6A9888.670Oryctolagus_cuniculus
ENSSFOG00015004941rab419485.714ENSORLG00000000937-9885.714Oryzias_latipes
ENSSFOG00015004941rab419689.806ENSORLG00000026197rab6a9890.148Oryzias_latipes
ENSSFOG00015004941rab419688.350ENSORLG00020001816rab6a9888.670Oryzias_latipes_hni
ENSSFOG00015004941rab4110094.419ENSORLG00020000604rab419696.552Oryzias_latipes_hni
ENSSFOG00015004941rab419689.806ENSORLG00015006162rab6a9890.148Oryzias_latipes_hsok
ENSSFOG00015004941rab419689.806ENSOMEG00000004379-9890.148Oryzias_melastigma
ENSSFOG00015004941rab419687.864ENSOGAG00000027043RAB6A9888.177Otolemur_garnettii
ENSSFOG00015004941rab419688.350ENSOARG00000007994RAB6A9888.670Ovis_aries
ENSSFOG00015004941rab419588.780ENSPPAG00000011436RAB6A9888.670Pan_paniscus
ENSSFOG00015004941rab419688.350ENSPPRG00000009543RAB6A9888.670Panthera_pardus
ENSSFOG00015004941rab419588.780ENSPTRG00000044137RAB6A9888.670Pan_troglodytes
ENSSFOG00015004941rab419688.350ENSPANG00000014356RAB6A9888.670Papio_anubis
ENSSFOG00015004941rab419891.905ENSPKIG00000018584rab419693.103Paramormyrops_kingsleyae
ENSSFOG00015004941rab419587.805ENSPMGG00000010067-9888.177Periophthalmus_magnuspinnatus
ENSSFOG00015004941rab419689.320ENSPFOG00000019509rab6a9890.148Poecilia_formosa
ENSSFOG00015004941rab4110094.419ENSPLAG00000000376rab419696.552Poecilia_latipinna
ENSSFOG00015004941rab419687.864ENSPLAG00000019570rab6a9888.670Poecilia_latipinna
ENSSFOG00015004941rab419689.320ENSPMEG00000003369rab6a9890.148Poecilia_mexicana
ENSSFOG00015004941rab4110094.419ENSPMEG00000014170rab419696.552Poecilia_mexicana
ENSSFOG00015004941rab419689.320ENSPREG00000021505rab6a9890.148Poecilia_reticulata
ENSSFOG00015004941rab419588.780ENSPPYG00000003663RAB6A9888.670Pongo_abelii
ENSSFOG00015004941rab418691.351ENSPCAG00000006752RAB6A9791.758Procavia_capensis
ENSSFOG00015004941rab419688.350ENSPCOG00000021991RAB6A9888.670Propithecus_coquereli
ENSSFOG00015004941rab419688.350ENSPVAG00000017342RAB6A9888.670Pteropus_vampyrus
ENSSFOG00015004941rab4110094.419ENSPNYG00000013288rab419696.552Pundamilia_nyererei
ENSSFOG00015004941rab419589.756ENSPNYG00000020556rab6a9890.148Pundamilia_nyererei
ENSSFOG00015004941rab4110094.419ENSPNAG00000021737rab4110094.419Pygocentrus_nattereri
ENSSFOG00015004941rab419688.350ENSRNOG00000018176Rab6a9888.670Rattus_norvegicus
ENSSFOG00015004941rab419688.350ENSRBIG00000030390RAB6A9888.670Rhinopithecus_bieti
ENSSFOG00015004941rab419688.350ENSRROG00000042103RAB6A9888.670Rhinopithecus_roxellana
ENSSFOG00015004941rab419675.728ENSSBOG00000028389RAB6A9775.862Saimiri_boliviensis_boliviensis
ENSSFOG00015004941rab4110094.419ENSSMAG00000015774rab419696.552Scophthalmus_maximus
ENSSFOG00015004941rab419589.268ENSSMAG00000017205-9889.655Scophthalmus_maximus
ENSSFOG00015004941rab419590.244ENSSDUG00000013496-9890.640Seriola_dumerili
ENSSFOG00015004941rab419590.244ENSSLDG00000015289-9890.640Seriola_lalandi_dorsalis
ENSSFOG00015004941rab4110094.419ENSSLDG00000022282rab419696.552Seriola_lalandi_dorsalis
ENSSFOG00015004941rab419688.350ENSSPUG00000017301RAB6A9888.670Sphenodon_punctatus
ENSSFOG00015004941rab419892.381ENSSPUG00000001533-9693.596Sphenodon_punctatus
ENSSFOG00015004941rab4110094.419ENSSPAG00000006001rab419696.552Stegastes_partitus
ENSSFOG00015004941rab419688.350ENSSPAG00000001067-9889.163Stegastes_partitus
ENSSFOG00015004941rab419688.350ENSSSCG00000014828RAB6A9888.670Sus_scrofa
ENSSFOG00015004941rab419589.268ENSTGUG00000013470RAB6A9889.163Taeniopygia_guttata
ENSSFOG00015004941rab4110094.419ENSTRUG00000009223rab419696.552Takifugu_rubripes
ENSSFOG00015004941rab419588.780ENSTRUG00000023252rab6a9889.163Takifugu_rubripes
ENSSFOG00015004941rab419687.864ENSTTRG00000005374RAB6A9888.177Tursiops_truncatus
ENSSFOG00015004941rab419683.495ENSUMAG00000010248RAB6A9883.744Ursus_maritimus
ENSSFOG00015004941rab419688.350ENSVVUG00000024550RAB6A9888.670Vulpes_vulpes
ENSSFOG00015004941rab418789.840ENSXETG00000023200rab6a9790.217Xenopus_tropicalis
ENSSFOG00015004941rab419677.184ENSXETG00000031363-9877.340Xenopus_tropicalis
ENSSFOG00015004941rab419687.864ENSXCOG00000006259rab6a9888.670Xiphophorus_couchianus
ENSSFOG00015004941rab419689.320ENSXMAG00000011903rab6a9890.148Xiphophorus_maculatus

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