EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004974 (Gene tree)
Gene ID: 108925812
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 39630 bases
Position: chrKV410847.1:1665308-1704937
Accession: 108925812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015007579	RRM_1	PF00076.22	1.9e-10	1	1
ENSSFOP00015007552	RRM_1	PF00076.22	2e-10	1	1
ENSSFOP00015007560	RRM_1	PF00076.22	2e-10	1	1
ENSSFOP00015007542	RRM_1	PF00076.22	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007663	-	2115	XM_018738071	ENSSFOP00015007552	652 (aa)	XP_018593587	A0A1W4YZ73
ENSSFOT00015007653	-	2098	XM_018738065	ENSSFOP00015007542	669 (aa)	XP_018593581	A0A1W4YZ66
ENSSFOT00015007690	-	2184	-	ENSSFOP00015007579	643 (aa)	-	-
ENSSFOT00015007672	-	2211	XM_018738069	ENSSFOP00015007560	652 (aa)	XP_018593585	A0A1W4YZ73

Gene Model

Click here to download ENSSFOG00015004974's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04114	Oocyte meiosis	KEGG
sfm04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004974	cpeb3	63	78.729	ENSSFOG00015018275	-	99	78.818
ENSSFOG00015004974	cpeb3	92	61.613	ENSSFOG00015000264	CPEB4	82	61.997
ENSSFOG00015004974	cpeb3	94	61.102	ENSSFOG00015017925	cpeb4	84	61.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004974	cpeb3	100	74.245	ENSG00000107864	CPEB3	100	74.855	Homo_sapiens
ENSSFOG00015004974	cpeb3	100	77.892	ENSAPOG00000003625	cpeb3	100	79.335	Acanthochromis_polyacanthus
ENSSFOG00015004974	cpeb3	100	71.671	ENSAMEG00000014204	CPEB3	100	72.238	Ailuropoda_melanoleuca
ENSSFOG00015004974	cpeb3	100	76.879	ENSACIG00000001933	cpeb3	100	78.179	Amphilophus_citrinellus
ENSSFOG00015004974	cpeb3	100	80.455	ENSAOCG00000015423	cpeb3	100	81.364	Amphiprion_ocellaris
ENSSFOG00015004974	cpeb3	100	81.032	ENSATEG00000010649	cpeb3	100	81.437	Anabas_testudineus
ENSSFOG00015004974	cpeb3	100	79.016	ENSACAG00000006335	CPEB3	100	78.437	Anolis_carolinensis
ENSSFOG00015004974	cpeb3	100	72.587	ENSANAG00000037406	CPEB3	100	72.390	Aotus_nancymaae
ENSSFOG00015004974	cpeb3	100	80.909	ENSACLG00000018590	cpeb3	89	81.212	Astatotilapia_calliptera
ENSSFOG00015004974	cpeb3	100	74.286	ENSBTAG00000015450	CPEB3	94	93.709	Bos_taurus
ENSSFOG00015004974	cpeb3	100	71.548	ENSCJAG00000008495	CPEB3	100	72.752	Callithrix_jacchus
ENSSFOG00015004974	cpeb3	100	74.676	ENSCAFG00000007423	CPEB3	100	75.145	Canis_familiaris
ENSSFOG00015004974	cpeb3	100	71.310	ENSCAFG00020001981	CPEB3	91	94.352	Canis_lupus_dingo
ENSSFOG00015004974	cpeb3	100	72.099	ENSCHIG00000017337	CPEB3	100	72.514	Capra_hircus
ENSSFOG00015004974	cpeb3	82	84.235	ENSTSYG00000003928	CPEB3	82	84.309	Carlito_syrichta
ENSSFOG00015004974	cpeb3	100	72.765	ENSCCAG00000033267	CPEB3	100	72.490	Cebus_capucinus
ENSSFOG00015004974	cpeb3	100	73.609	ENSCATG00000038447	CPEB3	100	74.032	Cercocebus_atys
ENSSFOG00015004974	cpeb3	69	84.144	ENSCLAG00000011817	CPEB3	95	84.144	Chinchilla_lanigera
ENSSFOG00015004974	cpeb3	100	73.714	ENSCSAG00000006579	CPEB3	100	74.138	Chlorocebus_sabaeus
ENSSFOG00015004974	cpeb3	54	74.194	ENSCHOG00000000272	-	100	74.194	Choloepus_hoffmanni
ENSSFOG00015004974	cpeb3	100	81.194	ENSCPBG00000023779	CPEB3	100	81.493	Chrysemys_picta_bellii
ENSSFOG00015004974	cpeb3	100	74.069	ENSCANG00000040306	CPEB3	100	74.676	Colobus_angolensis_palliatus
ENSSFOG00015004974	cpeb3	100	71.802	ENSCGRG00001003846	Cpeb3	100	72.652	Cricetulus_griseus_chok1gshd
ENSSFOG00015004974	cpeb3	60	86.265	ENSCGRG00000002839	Cpeb3	100	86.265	Cricetulus_griseus_crigri
ENSSFOG00015004974	cpeb3	91	77.600	ENSCSEG00000008423	cpeb3	100	76.960	Cynoglossus_semilaevis
ENSSFOG00015004974	cpeb3	100	75.498	ENSCVAG00000005998	cpeb3	100	75.878	Cyprinodon_variegatus
ENSSFOG00015004974	cpeb3	100	73.435	ENSDARG00000060103	cpeb3	100	73.893	Danio_rerio
ENSSFOG00015004974	cpeb3	100	67.688	ENSDNOG00000048639	CPEB3	100	67.972	Dasypus_novemcinctus
ENSSFOG00015004974	cpeb3	90	88.889	ENSDORG00000028940	Cpeb3	87	88.889	Dipodomys_ordii
ENSSFOG00015004974	cpeb3	100	68.732	ENSETEG00000000111	CPEB3	100	68.883	Echinops_telfairi
ENSSFOG00015004974	cpeb3	91	63.480	ENSEBUG00000010745	cpeb3	78	63.323	Eptatretus_burgeri
ENSSFOG00015004974	cpeb3	100	72.184	ENSEASG00005011095	CPEB3	100	72.966	Equus_asinus_asinus
ENSSFOG00015004974	cpeb3	100	72.284	ENSECAG00000000077	CPEB3	100	73.066	Equus_caballus
ENSSFOG00015004974	cpeb3	100	81.126	ENSELUG00000019251	cpeb3	100	81.763	Esox_lucius
ENSSFOG00015004974	cpeb3	100	74.784	ENSFCAG00000032380	CPEB3	100	75.253	Felis_catus
ENSSFOG00015004974	cpeb3	100	81.222	ENSFALG00000007952	CPEB3	87	81.426	Ficedula_albicollis
ENSSFOG00015004974	cpeb3	83	85.945	ENSFDAG00000016459	CPEB3	85	86.728	Fukomys_damarensis
ENSSFOG00015004974	cpeb3	100	74.665	ENSFHEG00000021371	cpeb3	100	72.000	Fundulus_heteroclitus
ENSSFOG00015004974	cpeb3	88	76.721	ENSGMOG00000008307	cpeb3	100	75.649	Gadus_morhua
ENSSFOG00015004974	cpeb3	100	78.863	ENSGALG00000006912	CPEB3	100	78.417	Gallus_gallus
ENSSFOG00015004974	cpeb3	99	76.691	ENSGACG00000002944	cpeb3	100	77.429	Gasterosteus_aculeatus
ENSSFOG00015004974	cpeb3	100	80.660	ENSGAGG00000008528	CPEB3	100	80.960	Gopherus_agassizii
ENSSFOG00015004974	cpeb3	100	71.766	ENSGGOG00000016441	CPEB3	100	72.552	Gorilla_gorilla
ENSSFOG00015004974	cpeb3	100	78.477	ENSHBUG00000004097	cpeb3	95	78.205	Haplochromis_burtoni
ENSSFOG00015004974	cpeb3	100	73.857	ENSHGLG00000014022	CPEB3	100	74.788	Heterocephalus_glaber_female
ENSSFOG00015004974	cpeb3	100	69.144	ENSHGLG00100005200	CPEB3	100	70.407	Heterocephalus_glaber_male
ENSSFOG00015004974	cpeb3	100	72.821	ENSHCOG00000005747	cpeb3	100	74.052	Hippocampus_comes
ENSSFOG00015004974	cpeb3	100	77.434	ENSIPUG00000018571	cpeb3	100	78.409	Ictalurus_punctatus
ENSSFOG00015004974	cpeb3	100	73.072	ENSSTOG00000028061	CPEB3	100	73.803	Ictidomys_tridecemlineatus
ENSSFOG00015004974	cpeb3	60	86.506	ENSJJAG00000009135	Cpeb3	100	86.506	Jaculus_jaculus
ENSSFOG00015004974	cpeb3	100	78.203	ENSLBEG00000025961	cpeb3	100	79.130	Labrus_bergylta
ENSSFOG00015004974	cpeb3	100	79.305	ENSLACG00000011307	CPEB3	93	78.979	Latimeria_chalumnae
ENSSFOG00015004974	cpeb3	100	84.569	ENSLOCG00000007131	cpeb3	100	80.263	Lepisosteus_oculatus
ENSSFOG00015004974	cpeb3	100	74.207	ENSLAFG00000018716	CPEB3	94	89.325	Loxodonta_africana
ENSSFOG00015004974	cpeb3	100	68.759	ENSMFAG00000025613	CPEB3	91	82.452	Macaca_fascicularis
ENSSFOG00015004974	cpeb3	100	74.069	ENSMMUG00000015050	CPEB3	100	74.388	Macaca_mulatta
ENSSFOG00015004974	cpeb3	100	73.504	ENSMNEG00000045465	CPEB3	100	73.926	Macaca_nemestrina
ENSSFOG00015004974	cpeb3	87	82.719	ENSMLEG00000031794	CPEB3	98	84.419	Mandrillus_leucophaeus
ENSSFOG00015004974	cpeb3	100	77.035	ENSMAMG00000012794	cpeb3	100	78.732	Mastacembelus_armatus
ENSSFOG00015004974	cpeb3	100	78.331	ENSMZEG00005012068	cpeb3	100	78.613	Maylandia_zebra
ENSSFOG00015004974	cpeb3	100	81.343	ENSMGAG00000009148	CPEB3	100	81.602	Meleagris_gallopavo
ENSSFOG00015004974	cpeb3	100	74.143	ENSMAUG00000002789	Cpeb3	100	74.605	Mesocricetus_auratus
ENSSFOG00015004974	cpeb3	100	71.685	ENSMICG00000026866	CPEB3	100	72.399	Microcebus_murinus
ENSSFOG00015004974	cpeb3	100	71.644	ENSMOCG00000016486	Cpeb3	100	72.490	Microtus_ochrogaster
ENSSFOG00015004974	cpeb3	96	79.310	ENSMMOG00000008209	cpeb3	88	80.063	Mola_mola
ENSSFOG00015004974	cpeb3	100	73.517	ENSMODG00000006673	CPEB3	100	74.069	Monodelphis_domestica
ENSSFOG00015004974	cpeb3	100	80.062	ENSMALG00000009305	cpeb3	98	91.750	Monopterus_albus
ENSSFOG00015004974	cpeb3	100	74.286	MGP_CAROLIEiJ_G0022910	Cpeb3	100	86.506	Mus_caroli
ENSSFOG00015004974	cpeb3	100	74.569	ENSMUSG00000039652	Cpeb3	100	86.506	Mus_musculus
ENSSFOG00015004974	cpeb3	100	74.392	MGP_PahariEiJ_G0014405	Cpeb3	100	86.506	Mus_pahari
ENSSFOG00015004974	cpeb3	100	74.392	MGP_SPRETEiJ_G0023829	Cpeb3	100	86.506	Mus_spretus
ENSSFOG00015004974	cpeb3	100	74.432	ENSMPUG00000017227	CPEB3	100	75.321	Mustela_putorius_furo
ENSSFOG00015004974	cpeb3	100	72.472	ENSNGAG00000015621	Cpeb3	100	72.954	Nannospalax_galili
ENSSFOG00015004974	cpeb3	100	80.330	ENSNBRG00000018343	cpeb3	93	79.209	Neolamprologus_brichardi
ENSSFOG00015004974	cpeb3	100	74.175	ENSNLEG00000012600	CPEB3	100	74.784	Nomascus_leucogenys
ENSSFOG00015004974	cpeb3	75	82.609	ENSMEUG00000009948	-	75	82.609	Notamacropus_eugenii
ENSSFOG00015004974	cpeb3	100	70.040	ENSODEG00000004591	CPEB3	100	71.138	Octodon_degus
ENSSFOG00015004974	cpeb3	50	92.683	ENSOANG00000015723	-	99	93.598	Ornithorhynchus_anatinus
ENSSFOG00015004974	cpeb3	100	72.022	ENSOCUG00000010454	CPEB3	100	72.853	Oryctolagus_cuniculus
ENSSFOG00015004974	cpeb3	100	76.723	ENSORLG00000000726	cpeb3	100	77.134	Oryzias_latipes
ENSSFOG00015004974	cpeb3	100	76.190	ENSORLG00020004475	cpeb3	100	77.677	Oryzias_latipes_hni
ENSSFOG00015004974	cpeb3	100	76.651	ENSORLG00015011683	cpeb3	100	78.130	Oryzias_latipes_hsok
ENSSFOG00015004974	cpeb3	100	77.238	ENSOMEG00000018265	cpeb3	93	76.612	Oryzias_melastigma
ENSSFOG00015004974	cpeb3	100	74.319	ENSOGAG00000002002	CPEB3	100	74.928	Otolemur_garnettii
ENSSFOG00015004974	cpeb3	100	74.964	ENSOARG00000016671	CPEB3	100	74.964	Ovis_aries
ENSSFOG00015004974	cpeb3	69	82.452	ENSPPAG00000031528	CPEB3	100	78.782	Pan_paniscus
ENSSFOG00015004974	cpeb3	100	74.784	ENSPPRG00000015654	CPEB3	100	75.253	Panthera_pardus
ENSSFOG00015004974	cpeb3	66	83.778	ENSPTIG00000012018	CPEB3	97	94.483	Panthera_tigris_altaica
ENSSFOG00015004974	cpeb3	100	71.429	ENSPTRG00000002753	CPEB3	100	72.414	Pan_troglodytes
ENSSFOG00015004974	cpeb3	100	70.670	ENSPANG00000021561	CPEB3	100	71.489	Papio_anubis
ENSSFOG00015004974	cpeb3	100	86.970	ENSPKIG00000015878	cpeb3	100	86.970	Paramormyrops_kingsleyae
ENSSFOG00015004974	cpeb3	100	71.582	ENSPMGG00000022722	cpeb3	100	72.811	Periophthalmus_magnuspinnatus
ENSSFOG00015004974	cpeb3	100	74.499	ENSPEMG00000008448	Cpeb3	100	75.142	Peromyscus_maniculatus_bairdii
ENSSFOG00015004974	cpeb3	100	71.409	ENSPCIG00000017302	CPEB3	100	72.093	Phascolarctos_cinereus
ENSSFOG00015004974	cpeb3	100	76.900	ENSPFOG00000011231	cpeb3	100	77.542	Poecilia_formosa
ENSSFOG00015004974	cpeb3	100	72.961	ENSPLAG00000002852	cpeb3	100	74.746	Poecilia_latipinna
ENSSFOG00015004974	cpeb3	100	72.389	ENSPMEG00000021572	cpeb3	100	74.601	Poecilia_mexicana
ENSSFOG00015004974	cpeb3	100	72.675	ENSPREG00000003085	cpeb3	100	74.785	Poecilia_reticulata
ENSSFOG00015004974	cpeb3	100	70.893	ENSPPYG00000002481	CPEB3	100	71.201	Pongo_abelii
ENSSFOG00015004974	cpeb3	100	66.989	ENSPCAG00000012417	CPEB3	100	67.684	Procavia_capensis
ENSSFOG00015004974	cpeb3	100	73.639	ENSPCOG00000023690	CPEB3	100	74.101	Propithecus_coquereli
ENSSFOG00015004974	cpeb3	80	83.065	ENSPVAG00000007664	CPEB3	74	83.065	Pteropus_vampyrus
ENSSFOG00015004974	cpeb3	100	78.477	ENSPNYG00000005300	cpeb3	100	78.757	Pundamilia_nyererei
ENSSFOG00015004974	cpeb3	100	80.342	ENSPNAG00000012111	cpeb3	100	80.769	Pygocentrus_nattereri
ENSSFOG00015004974	cpeb3	100	72.576	ENSRNOG00000020689	Cpeb3	95	72.466	Rattus_norvegicus
ENSSFOG00015004974	cpeb3	100	71.429	ENSRBIG00000041079	CPEB3	100	72.138	Rhinopithecus_bieti
ENSSFOG00015004974	cpeb3	100	74.138	ENSRROG00000031558	CPEB3	100	74.459	Rhinopithecus_roxellana
ENSSFOG00015004974	cpeb3	66	89.044	ENSSBOG00000035843	CPEB3	100	89.044	Saimiri_boliviensis_boliviensis
ENSSFOG00015004974	cpeb3	100	79.154	ENSSMAG00000013924	cpeb3	100	80.328	Scophthalmus_maximus
ENSSFOG00015004974	cpeb3	100	79.910	ENSSDUG00000019766	cpeb3	100	81.709	Seriola_dumerili
ENSSFOG00015004974	cpeb3	100	80.909	ENSSLDG00000021438	cpeb3	100	81.818	Seriola_lalandi_dorsalis
ENSSFOG00015004974	cpeb3	54	83.602	ENSSARG00000001994	CPEB3	100	83.602	Sorex_araneus
ENSSFOG00015004974	cpeb3	100	78.229	ENSSPAG00000004725	cpeb3	100	79.656	Stegastes_partitus
ENSSFOG00015004974	cpeb3	100	73.932	ENSSSCG00000010468	CPEB3	100	74.249	Sus_scrofa
ENSSFOG00015004974	cpeb3	100	78.386	ENSTGUG00000008988	CPEB3	100	78.530	Taeniopygia_guttata
ENSSFOG00015004974	cpeb3	62	77.647	ENSTBEG00000013125	-	60	77.647	Tupaia_belangeri
ENSSFOG00015004974	cpeb3	100	68.802	ENSTTRG00000012334	CPEB3	100	69.091	Tursiops_truncatus
ENSSFOG00015004974	cpeb3	100	70.735	ENSUAMG00000010827	CPEB3	90	88.843	Ursus_americanus
ENSSFOG00015004974	cpeb3	100	74.676	ENSVVUG00000021375	CPEB3	100	75.321	Vulpes_vulpes
ENSSFOG00015004974	cpeb3	100	76.435	ENSXETG00000012190	cpeb3	99	77.232	Xenopus_tropicalis
ENSSFOG00015004974	cpeb3	100	73.669	ENSXCOG00000006122	cpeb3	100	76.126	Xiphophorus_couchianus
ENSSFOG00015004974	cpeb3	100	76.444	ENSXMAG00000007652	cpeb3	94	96.575	Xiphophorus_maculatus