EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015004995 (Gene tree)
Gene ID: 108929946
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 13360 bases
Position: chrKV410906.1:522644-536003
Accession: 108929946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015007612	RRM_1	PF00076.22	2e-21	1	2
ENSSFOP00015007612	RRM_1	PF00076.22	2e-21	2	2
ENSSFOP00015007592	RRM_1	PF00076.22	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007723	-	1814	XM_018744881	ENSSFOP00015007612	538 (aa)	XP_018600397	A0A1W4Z9H5
ENSSFOT00015007703	-	1670	XM_018744882	ENSSFOP00015007592	507 (aa)	XP_018600398	-

Gene Model

Click here to download ENSSFOG00015004995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015004995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015004995	srek1	52	45.196	ENSSFOG00015014887	srsf11	89	38.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015004995	srek1	52	46.953	ENSG00000116754	SRSF11	67	70.930	Homo_sapiens
ENSSFOG00015004995	srek1	57	72.046	ENSG00000153914	SREK1	97	74.667	Homo_sapiens
ENSSFOG00015004995	srek1	67	74.694	ENSAPOG00000023618	srek1	94	56.452	Acanthochromis_polyacanthus
ENSSFOG00015004995	srek1	53	84.321	ENSAMEG00000011327	SREK1	65	73.236	Ailuropoda_melanoleuca
ENSSFOG00015004995	srek1	52	41.637	ENSAOCG00000010541	-	95	35.963	Amphiprion_ocellaris
ENSSFOG00015004995	srek1	67	75.102	ENSAOCG00000024379	srek1	98	52.232	Amphiprion_ocellaris
ENSSFOG00015004995	srek1	59	40.190	ENSAPEG00000003142	SRSF11	84	67.901	Amphiprion_percula
ENSSFOG00015004995	srek1	52	42.857	ENSATEG00000007534	-	92	61.261	Anabas_testudineus
ENSSFOG00015004995	srek1	87	54.955	ENSATEG00000009450	srek1	97	54.157	Anabas_testudineus
ENSSFOG00015004995	srek1	52	40.357	ENSATEG00000011691	srsf11	75	67.901	Anabas_testudineus
ENSSFOG00015004995	srek1	73	73.418	ENSAPLG00000003948	-	70	83.916	Anas_platyrhynchos
ENSSFOG00015004995	srek1	53	44.912	ENSACAG00000013654	SRSF11	98	40.074	Anolis_carolinensis
ENSSFOG00015004995	srek1	52	46.953	ENSANAG00000018690	-	84	41.782	Aotus_nancymaae
ENSSFOG00015004995	srek1	52	85.357	ENSANAG00000031358	SREK1	91	84.916	Aotus_nancymaae
ENSSFOG00015004995	srek1	54	85.517	ENSACLG00000026754	srek1	98	85.517	Astatotilapia_calliptera
ENSSFOG00015004995	srek1	97	68.411	ENSAMXG00000043877	srek1	100	68.411	Astyanax_mexicanus
ENSSFOG00015004995	srek1	95	38.838	ENSAMXG00000008655	-	97	36.984	Astyanax_mexicanus
ENSSFOG00015004995	srek1	53	84.669	ENSBTAG00000007321	SREK1	85	87.059	Bos_taurus
ENSSFOG00015004995	srek1	52	46.595	ENSBTAG00000015474	SRSF11	84	41.386	Bos_taurus
ENSSFOG00015004995	srek1	52	47.500	ENSCJAG00000017704	SRSF11	71	41.782	Callithrix_jacchus
ENSSFOG00015004995	srek1	53	84.507	ENSCJAG00000015950	SREK1	91	84.916	Callithrix_jacchus
ENSSFOG00015004995	srek1	64	65.633	ENSCAFG00000007560	SREK1	65	73.236	Canis_familiaris
ENSSFOG00015004995	srek1	52	46.786	ENSCHIG00000025295	SRSF11	75	68.539	Capra_hircus
ENSSFOG00015004995	srek1	52	44.444	ENSTSYG00000033270	-	98	37.594	Carlito_syrichta
ENSSFOG00015004995	srek1	53	84.321	ENSTSYG00000036957	SREK1	91	83.516	Carlito_syrichta
ENSSFOG00015004995	srek1	53	84.028	ENSCPOG00000008925	SREK1	97	62.063	Cavia_porcellus
ENSSFOG00015004995	srek1	50	45.896	ENSCPOG00000009554	SRSF11	84	39.600	Cavia_porcellus
ENSSFOG00015004995	srek1	53	84.561	ENSCCAG00000020591	SREK1	85	85.882	Cebus_capucinus
ENSSFOG00015004995	srek1	52	46.953	ENSCCAG00000036133	-	85	41.732	Cebus_capucinus
ENSSFOG00015004995	srek1	52	85.357	ENSCATG00000031482	SREK1	91	84.916	Cercocebus_atys
ENSSFOG00015004995	srek1	52	46.953	ENSCATG00000043613	SRSF11	84	41.782	Cercocebus_atys
ENSSFOG00015004995	srek1	97	52.341	ENSCLAG00000005024	SREK1	64	72.980	Chinchilla_lanigera
ENSSFOG00015004995	srek1	52	46.953	ENSCSAG00000001375	SRSF11	84	41.782	Chlorocebus_sabaeus
ENSSFOG00015004995	srek1	59	71.473	ENSCHOG00000004956	SREK1	50	74.048	Choloepus_hoffmanni
ENSSFOG00015004995	srek1	53	83.860	ENSCPBG00000026866	SREK1	85	83.860	Chrysemys_picta_bellii
ENSSFOG00015004995	srek1	52	48.276	ENSCING00000022892	-	69	48.276	Ciona_intestinalis
ENSSFOG00015004995	srek1	52	46.953	ENSCANG00000039796	SRSF11	84	41.782	Colobus_angolensis_palliatus
ENSSFOG00015004995	srek1	52	85.357	ENSCANG00000030421	SREK1	91	84.916	Colobus_angolensis_palliatus
ENSSFOG00015004995	srek1	52	44.086	ENSCGRG00001012043	Srsf11	81	41.292	Cricetulus_griseus_chok1gshd
ENSSFOG00015004995	srek1	52	43.929	ENSCSEG00000010721	-	89	37.739	Cynoglossus_semilaevis
ENSSFOG00015004995	srek1	52	43.369	ENSCVAG00000006934	-	94	36.484	Cyprinodon_variegatus
ENSSFOG00015004995	srek1	95	68.350	ENSDARG00000009764	srek1	97	63.495	Danio_rerio
ENSSFOG00015004995	srek1	52	46.595	ENSDNOG00000008603	SRSF11	85	39.499	Dasypus_novemcinctus
ENSSFOG00015004995	srek1	53	84.321	ENSDNOG00000010327	SREK1	62	73.537	Dasypus_novemcinctus
ENSSFOG00015004995	srek1	52	46.595	ENSDORG00000000669	Srsf11	85	41.535	Dipodomys_ordii
ENSSFOG00015004995	srek1	51	39.576	FBgn0024285	Srp54	53	38.832	Drosophila_melanogaster
ENSSFOG00015004995	srek1	53	71.228	ENSETEG00000012977	SREK1	64	63.868	Echinops_telfairi
ENSSFOG00015004995	srek1	52	46.786	ENSEASG00005007847	SRSF11	78	68.539	Equus_asinus_asinus
ENSSFOG00015004995	srek1	91	39.181	ENSELUG00000021268	-	88	37.333	Esox_lucius
ENSSFOG00015004995	srek1	52	43.772	ENSELUG00000023887	srsf11	84	37.549	Esox_lucius
ENSSFOG00015004995	srek1	96	71.190	ENSELUG00000008230	srek1	98	68.901	Esox_lucius
ENSSFOG00015004995	srek1	67	65.239	ENSFDAG00000017844	SREK1	63	73.232	Fukomys_damarensis
ENSSFOG00015004995	srek1	52	44.286	ENSFHEG00000003732	SRSF11	87	36.255	Fundulus_heteroclitus
ENSSFOG00015004995	srek1	78	53.616	ENSFHEG00000020971	srek1	97	52.311	Fundulus_heteroclitus
ENSSFOG00015004995	srek1	58	41.534	ENSGMOG00000002255	-	90	37.500	Gadus_morhua
ENSSFOG00015004995	srek1	52	41.429	ENSGAFG00000021415	SRSF11	75	38.627	Gambusia_affinis
ENSSFOG00015004995	srek1	91	35.294	ENSGACG00000017855	-	83	36.714	Gasterosteus_aculeatus
ENSSFOG00015004995	srek1	52	41.637	ENSGACG00000009346	srsf11	97	55.357	Gasterosteus_aculeatus
ENSSFOG00015004995	srek1	66	77.031	ENSGAGG00000006087	SREK1	67	84.211	Gopherus_agassizii
ENSSFOG00015004995	srek1	52	46.953	ENSGGOG00000005774	SRSF11	84	41.782	Gorilla_gorilla
ENSSFOG00015004995	srek1	52	85.357	ENSGGOG00000004737	SREK1	91	84.916	Gorilla_gorilla
ENSSFOG00015004995	srek1	52	46.595	ENSHGLG00000008682	SRSF11	85	41.386	Heterocephalus_glaber_female
ENSSFOG00015004995	srek1	52	46.099	ENSHGLG00100018382	SRSF11	89	41.235	Heterocephalus_glaber_male
ENSSFOG00015004995	srek1	97	65.038	ENSIPUG00000016851	srek1	100	64.098	Ictalurus_punctatus
ENSSFOG00015004995	srek1	52	46.595	ENSSTOG00000008675	SRSF11	84	41.584	Ictidomys_tridecemlineatus
ENSSFOG00015004995	srek1	53	83.448	ENSSTOG00000008850	SREK1	85	87.059	Ictidomys_tridecemlineatus
ENSSFOG00015004995	srek1	52	46.595	ENSJJAG00000017238	Srsf11	88	41.980	Jaculus_jaculus
ENSSFOG00015004995	srek1	52	41.281	ENSKMAG00000009775	srsf11	98	36.266	Kryptolebias_marmoratus
ENSSFOG00015004995	srek1	56	41.776	ENSLBEG00000024167	srsf11	84	67.073	Labrus_bergylta
ENSSFOG00015004995	srek1	52	43.728	ENSLACG00000006575	SRSF11	97	40.850	Latimeria_chalumnae
ENSSFOG00015004995	srek1	79	90.071	ENSLOCG00000010547	srek1	84	84.682	Lepisosteus_oculatus
ENSSFOG00015004995	srek1	52	44.643	ENSLOCG00000009617	srsf11	84	38.247	Lepisosteus_oculatus
ENSSFOG00015004995	srek1	52	46.643	ENSLAFG00000015882	SRSF11	93	39.630	Loxodonta_africana
ENSSFOG00015004995	srek1	53	62.369	ENSLAFG00000013853	SREK1	98	57.956	Loxodonta_africana
ENSSFOG00015004995	srek1	52	85.357	ENSMFAG00000039823	SREK1	91	84.916	Macaca_fascicularis
ENSSFOG00015004995	srek1	52	46.953	ENSMFAG00000043405	SRSF11	84	41.782	Macaca_fascicularis
ENSSFOG00015004995	srek1	52	46.953	ENSMMUG00000013852	SRSF11	87	41.879	Macaca_mulatta
ENSSFOG00015004995	srek1	57	78.964	ENSMMUG00000014586	SREK1	79	86.047	Macaca_mulatta
ENSSFOG00015004995	srek1	52	46.953	ENSMNEG00000029428	SRSF11	84	41.782	Macaca_nemestrina
ENSSFOG00015004995	srek1	52	85.357	ENSMNEG00000030723	SREK1	91	84.916	Macaca_nemestrina
ENSSFOG00015004995	srek1	52	46.953	ENSMLEG00000041592	SRSF11	84	41.782	Mandrillus_leucophaeus
ENSSFOG00015004995	srek1	52	85.357	ENSMLEG00000039078	SREK1	91	84.916	Mandrillus_leucophaeus
ENSSFOG00015004995	srek1	56	40.461	ENSMAMG00000000369	srsf11	86	54.819	Mastacembelus_armatus
ENSSFOG00015004995	srek1	91	39.328	ENSMAMG00000015002	-	92	63.366	Mastacembelus_armatus
ENSSFOG00015004995	srek1	52	44.086	ENSMAUG00000008832	Srsf11	84	40.541	Mesocricetus_auratus
ENSSFOG00015004995	srek1	57	71.347	ENSMAUG00000010066	-	92	69.153	Mesocricetus_auratus
ENSSFOG00015004995	srek1	53	84.321	ENSMICG00000034959	SREK1	91	84.916	Microcebus_murinus
ENSSFOG00015004995	srek1	52	44.086	ENSMOCG00000011388	Srsf11	81	41.292	Microtus_ochrogaster
ENSSFOG00015004995	srek1	53	41.754	ENSMMOG00000016751	-	92	61.261	Mola_mola
ENSSFOG00015004995	srek1	96	52.475	ENSMODG00000019665	SREK1	97	56.073	Monodelphis_domestica
ENSSFOG00015004995	srek1	96	58.317	ENSMALG00000017086	srek1	98	96.552	Monopterus_albus
ENSSFOG00015004995	srek1	88	32.692	ENSMALG00000020833	-	89	36.452	Monopterus_albus
ENSSFOG00015004995	srek1	52	44.086	MGP_CAROLIEiJ_G0025767	Srsf11	86	70.930	Mus_caroli
ENSSFOG00015004995	srek1	52	44.086	ENSMUSG00000055436	Srsf11	85	70.930	Mus_musculus
ENSSFOG00015004995	srek1	52	44.086	MGP_PahariEiJ_G0027217	Srsf11	86	70.930	Mus_pahari
ENSSFOG00015004995	srek1	52	44.086	MGP_SPRETEiJ_G0026719	Srsf11	86	70.930	Mus_spretus
ENSSFOG00015004995	srek1	59	71.795	ENSMPUG00000014736	SREK1	62	73.537	Mustela_putorius_furo
ENSSFOG00015004995	srek1	52	46.595	ENSMPUG00000000892	SRSF11	84	40.594	Mustela_putorius_furo
ENSSFOG00015004995	srek1	52	45.745	ENSMLUG00000006203	-	85	40.792	Myotis_lucifugus
ENSSFOG00015004995	srek1	52	46.237	ENSMLUG00000026338	-	85	39.881	Myotis_lucifugus
ENSSFOG00015004995	srek1	52	46.237	ENSNGAG00000010637	Srsf11	81	39.499	Nannospalax_galili
ENSSFOG00015004995	srek1	52	46.953	ENSNLEG00000009400	SRSF11	85	41.732	Nomascus_leucogenys
ENSSFOG00015004995	srek1	52	85.357	ENSNLEG00000003827	SREK1	85	85.882	Nomascus_leucogenys
ENSSFOG00015004995	srek1	54	84.828	ENSOPRG00000012111	SREK1	71	74.046	Ochotona_princeps
ENSSFOG00015004995	srek1	52	46.595	ENSODEG00000006289	SRSF11	95	40.511	Octodon_degus
ENSSFOG00015004995	srek1	72	87.189	ENSONIG00000011080	srek1	96	62.393	Oreochromis_niloticus
ENSSFOG00015004995	srek1	52	44.086	ENSOANG00000015528	SRSF11	87	41.815	Ornithorhynchus_anatinus
ENSSFOG00015004995	srek1	52	46.429	ENSOCUG00000024114	-	85	40.530	Oryctolagus_cuniculus
ENSSFOG00015004995	srek1	52	46.786	ENSOCUG00000025440	-	69	42.462	Oryctolagus_cuniculus
ENSSFOG00015004995	srek1	52	46.479	ENSOCUG00000002001	-	64	42.356	Oryctolagus_cuniculus
ENSSFOG00015004995	srek1	88	33.689	ENSORLG00000007753	srsf11	95	35.543	Oryzias_latipes
ENSSFOG00015004995	srek1	88	33.546	ENSORLG00020016204	srsf11	95	35.963	Oryzias_latipes_hni
ENSSFOG00015004995	srek1	52	42.553	ENSORLG00020009393	-	74	68.675	Oryzias_latipes_hni
ENSSFOG00015004995	srek1	52	42.553	ENSORLG00015009374	-	74	68.675	Oryzias_latipes_hsok
ENSSFOG00015004995	srek1	88	33.546	ENSORLG00015011944	srsf11	95	35.963	Oryzias_latipes_hsok
ENSSFOG00015004995	srek1	74	74.296	ENSOMEG00000015817	srek1	98	52.281	Oryzias_melastigma
ENSSFOG00015004995	srek1	53	43.007	ENSOMEG00000006172	-	89	36.667	Oryzias_melastigma
ENSSFOG00015004995	srek1	52	46.429	ENSOGAG00000003392	SRSF11	85	41.782	Otolemur_garnettii
ENSSFOG00015004995	srek1	53	84.669	ENSOARG00000006005	SREK1	65	73.723	Ovis_aries
ENSSFOG00015004995	srek1	52	46.595	ENSOARG00000011887	SRSF11	85	41.386	Ovis_aries
ENSSFOG00015004995	srek1	52	46.953	ENSPPAG00000036149	SRSF11	85	41.732	Pan_paniscus
ENSSFOG00015004995	srek1	52	85.357	ENSPPAG00000031605	SREK1	91	84.916	Pan_paniscus
ENSSFOG00015004995	srek1	52	46.595	ENSPPRG00000002720	SRSF11	84	40.990	Panthera_pardus
ENSSFOG00015004995	srek1	53	84.321	ENSPPRG00000024617	SREK1	85	87.059	Panthera_pardus
ENSSFOG00015004995	srek1	53	84.321	ENSPTIG00000006608	SREK1	85	87.059	Panthera_tigris_altaica
ENSSFOG00015004995	srek1	52	85.357	ENSPTRG00000016936	SREK1	91	84.916	Pan_troglodytes
ENSSFOG00015004995	srek1	52	47.143	ENSPTRG00000000852	SRSF11	85	41.732	Pan_troglodytes
ENSSFOG00015004995	srek1	52	46.953	ENSPANG00000018677	SRSF11	84	41.782	Papio_anubis
ENSSFOG00015004995	srek1	52	85.357	ENSPANG00000008953	SREK1	91	84.916	Papio_anubis
ENSSFOG00015004995	srek1	97	82.409	ENSPKIG00000025563	srek1	99	82.600	Paramormyrops_kingsleyae
ENSSFOG00015004995	srek1	52	44.444	ENSPSIG00000005152	SRSF11	87	41.602	Pelodiscus_sinensis
ENSSFOG00015004995	srek1	52	44.086	ENSPEMG00000014288	Srsf11	84	40.734	Peromyscus_maniculatus_bairdii
ENSSFOG00015004995	srek1	53	81.017	ENSPEMG00000024051	-	96	69.103	Peromyscus_maniculatus_bairdii
ENSSFOG00015004995	srek1	52	42.143	ENSPFOG00000014895	-	89	38.627	Poecilia_formosa
ENSSFOG00015004995	srek1	52	42.143	ENSPMEG00000023453	-	68	62.745	Poecilia_mexicana
ENSSFOG00015004995	srek1	52	41.429	ENSPREG00000009065	SRSF11	89	38.402	Poecilia_reticulata
ENSSFOG00015004995	srek1	67	62.408	ENSPPYG00000015515	SREK1	65	73.464	Pongo_abelii
ENSSFOG00015004995	srek1	52	46.953	ENSPPYG00000001245	SRSF11	84	41.782	Pongo_abelii
ENSSFOG00015004995	srek1	51	46.209	ENSPCOG00000025365	SRSF11	83	39.010	Propithecus_coquereli
ENSSFOG00015004995	srek1	53	84.321	ENSPCOG00000026230	SREK1	91	84.916	Propithecus_coquereli
ENSSFOG00015004995	srek1	53	84.912	ENSPVAG00000009763	SREK1	65	73.236	Pteropus_vampyrus
ENSSFOG00015004995	srek1	55	85.207	ENSPNYG00000007160	srek1	98	53.699	Pundamilia_nyererei
ENSSFOG00015004995	srek1	95	73.152	ENSPNAG00000004328	srek1	97	72.179	Pygocentrus_nattereri
ENSSFOG00015004995	srek1	52	44.086	ENSRNOG00000029592	Srsf11	81	41.292	Rattus_norvegicus
ENSSFOG00015004995	srek1	53	83.972	ENSRBIG00000033818	SREK1	92	82.609	Rhinopithecus_bieti
ENSSFOG00015004995	srek1	52	46.953	ENSRBIG00000042971	SRSF11	75	64.948	Rhinopithecus_bieti
ENSSFOG00015004995	srek1	52	85.357	ENSRROG00000017210	SREK1	91	84.916	Rhinopithecus_roxellana
ENSSFOG00015004995	srek1	52	46.953	ENSRROG00000039667	SRSF11	84	41.782	Rhinopithecus_roxellana
ENSSFOG00015004995	srek1	52	85.305	ENSSBOG00000031230	SREK1	91	84.916	Saimiri_boliviensis_boliviensis
ENSSFOG00015004995	srek1	52	46.953	ENSSBOG00000033461	SRSF11	75	64.948	Saimiri_boliviensis_boliviensis
ENSSFOG00015004995	srek1	52	44.086	ENSSHAG00000012111	SRSF11	88	41.667	Sarcophilus_harrisii
ENSSFOG00015004995	srek1	53	42.857	ENSSMAG00000019897	-	89	35.728	Scophthalmus_maximus
ENSSFOG00015004995	srek1	95	60.077	ENSSMAG00000011808	srek1	96	60.385	Scophthalmus_maximus
ENSSFOG00015004995	srek1	56	40.461	ENSSDUG00000004582	SRSF11	95	35.897	Seriola_dumerili
ENSSFOG00015004995	srek1	52	43.214	ENSSDUG00000018738	-	89	37.160	Seriola_dumerili
ENSSFOG00015004995	srek1	52	43.262	ENSSLDG00000012105	-	92	61.261	Seriola_lalandi_dorsalis
ENSSFOG00015004995	srek1	53	46.667	ENSSPUG00000016145	SRSF11	90	42.323	Sphenodon_punctatus
ENSSFOG00015004995	srek1	52	84.286	ENSSPUG00000016553	SREK1	90	84.286	Sphenodon_punctatus
ENSSFOG00015004995	srek1	52	41.637	ENSSPAG00000005684	srsf11	86	63.636	Stegastes_partitus
ENSSFOG00015004995	srek1	78	68.496	ENSTNIG00000013463	srek1	69	85.106	Tetraodon_nigroviridis
ENSSFOG00015004995	srek1	53	84.321	ENSUMAG00000008191	SREK1	65	73.839	Ursus_maritimus
ENSSFOG00015004995	srek1	52	46.595	ENSUMAG00000006618	SRSF11	90	39.839	Ursus_maritimus
ENSSFOG00015004995	srek1	52	45.161	ENSXETG00000012371	SRSF11	66	41.500	Xenopus_tropicalis
ENSSFOG00015004995	srek1	53	74.675	ENSXETG00000021460	srek1	84	65.714	Xenopus_tropicalis
ENSSFOG00015004995	srek1	52	41.429	ENSXMAG00000019180	SRSF11	66	62.136	Xiphophorus_maculatus