EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005064 (Gene tree)
Gene ID: 108930920
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 15688 bases
Position: chrKV410939.1:303417-319104
Accession: 108930920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015007701	Nucleoplasmin	PF03066.15	3.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015007814	-	3298	XM_018746412	ENSSFOP00015007701	291 (aa)	XP_018601928	A0A1W4ZMA3

Gene Model

Click here to download ENSSFOG00015005064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005064	npm1b	99	41.196	ENSSFOG00015007074	npm1a	98	39.796

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005064	npm1b	100	58.923	ENSAPOG00000004268	npm1b	99	58.249	Acanthochromis_polyacanthus
ENSSFOG00015005064	npm1b	100	58.446	ENSAOCG00000012549	npm1b	99	57.770	Amphiprion_ocellaris
ENSSFOG00015005064	npm1b	100	57.679	ENSAPEG00000000868	npm1b	99	57.338	Amphiprion_percula
ENSSFOG00015005064	npm1b	100	59.197	ENSATEG00000006254	npm1b	99	57.377	Anabas_testudineus
ENSSFOG00015005064	npm1b	97	40.956	ENSACAG00000015626	-	97	43.686	Anolis_carolinensis
ENSSFOG00015005064	npm1b	97	59.794	ENSAMXG00000042148	npm1b	96	60.000	Astyanax_mexicanus
ENSSFOG00015005064	npm1b	84	35.547	ENSCAFG00000023359	-	95	35.156	Canis_familiaris
ENSSFOG00015005064	npm1b	97	40.767	ENSCPBG00000021221	-	58	40.767	Chrysemys_picta_bellii
ENSSFOG00015005064	npm1b	100	56.040	ENSCSEG00000004530	npm1b	99	55.369	Cynoglossus_semilaevis
ENSSFOG00015005064	npm1b	100	55.667	ENSCVAG00000013016	npm1b	99	56.856	Cyprinodon_variegatus
ENSSFOG00015005064	npm1b	97	62.630	ENSDARG00000037675	npm1b	97	62.284	Danio_rerio
ENSSFOG00015005064	npm1b	98	58.667	ENSELUG00000022123	npm1b	97	58.667	Esox_lucius
ENSSFOG00015005064	npm1b	95	43.060	ENSFALG00000003320	-	94	43.060	Ficedula_albicollis
ENSSFOG00015005064	npm1b	100	57.143	ENSFHEG00000020794	npm1b	99	56.811	Fundulus_heteroclitus
ENSSFOG00015005064	npm1b	98	53.333	ENSGMOG00000002689	npm1b	99	53.333	Gadus_morhua
ENSSFOG00015005064	npm1b	97	43.357	ENSGALG00000002197	-	69	43.357	Gallus_gallus
ENSSFOG00015005064	npm1b	100	56.711	ENSGAFG00000017709	npm1b	99	56.040	Gambusia_affinis
ENSSFOG00015005064	npm1b	97	59.011	ENSGACG00000016706	npm1b	99	57.639	Gasterosteus_aculeatus
ENSSFOG00015005064	npm1b	97	40.625	ENSGAGG00000020250	-	96	42.014	Gopherus_agassizii
ENSSFOG00015005064	npm1b	100	58.333	ENSHBUG00000019903	npm1b	94	58.000	Haplochromis_burtoni
ENSSFOG00015005064	npm1b	100	53.716	ENSHCOG00000003895	npm1b	99	55.593	Hippocampus_comes
ENSSFOG00015005064	npm1b	99	55.844	ENSIPUG00000020165	npm1b	99	57.792	Ictalurus_punctatus
ENSSFOG00015005064	npm1b	99	57.143	ENSKMAG00000008260	npm1b	98	59.524	Kryptolebias_marmoratus
ENSSFOG00015005064	npm1b	98	35.439	ENSLACG00000013460	-	86	36.965	Latimeria_chalumnae
ENSSFOG00015005064	npm1b	92	44.178	ENSLACG00000001779	-	99	44.326	Latimeria_chalumnae
ENSSFOG00015005064	npm1b	95	52.013	ENSLOCG00000001942	npm1b	100	52.862	Lepisosteus_oculatus
ENSSFOG00015005064	npm1b	73	56.000	ENSMAMG00000015335	npm1b	100	56.000	Mastacembelus_armatus
ENSSFOG00015005064	npm1b	94	42.857	ENSMGAG00000001591	-	100	42.857	Meleagris_gallopavo
ENSSFOG00015005064	npm1b	82	55.823	ENSMALG00000015383	npm1b	99	59.036	Monopterus_albus
ENSSFOG00015005064	npm1b	99	55.517	ENSONIG00000001397	npm1b	97	55.172	Oreochromis_niloticus
ENSSFOG00015005064	npm1b	97	49.826	ENSOMEG00000003414	npm1b	96	50.175	Oryzias_melastigma
ENSSFOG00015005064	npm1b	99	69.967	ENSPKIG00000020050	npm1b	98	68.977	Paramormyrops_kingsleyae
ENSSFOG00015005064	npm1b	95	42.254	ENSPSIG00000011204	-	90	42.199	Pelodiscus_sinensis
ENSSFOG00015005064	npm1b	89	35.766	ENSPMAG00000004930	npm1b	99	37.324	Petromyzon_marinus
ENSSFOG00015005064	npm1b	100	57.525	ENSPFOG00000018357	npm1b	99	57.191	Poecilia_formosa
ENSSFOG00015005064	npm1b	97	59.170	ENSPNAG00000005498	npm1b	96	58.824	Pygocentrus_nattereri
ENSSFOG00015005064	npm1b	100	57.770	ENSSMAG00000008088	npm1b	99	56.856	Scophthalmus_maximus
ENSSFOG00015005064	npm1b	100	58.054	ENSSDUG00000007726	npm1b	99	57.718	Seriola_dumerili
ENSSFOG00015005064	npm1b	100	57.718	ENSSLDG00000021396	npm1b	99	57.383	Seriola_lalandi_dorsalis
ENSSFOG00015005064	npm1b	100	57.047	ENSSPAG00000011152	npm1b	99	56.711	Stegastes_partitus
ENSSFOG00015005064	npm1b	94	46.479	ENSTGUG00000014970	-	100	46.479	Taeniopygia_guttata
ENSSFOG00015005064	npm1b	98	60.417	ENSTRUG00000008105	npm1b	92	60.900	Takifugu_rubripes
ENSSFOG00015005064	npm1b	98	58.824	ENSTNIG00000013057	npm1b	97	58.824	Tetraodon_nigroviridis
ENSSFOG00015005064	npm1b	98	42.466	ENSXETG00000008403	npm1	96	42.466	Xenopus_tropicalis
ENSSFOG00015005064	npm1b	100	58.863	ENSXMAG00000001986	npm1b	99	59.197	Xiphophorus_maculatus