EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005188 (Gene tree)
Gene ID: 108921172
Gene Symbol: rab34
Alias: si:dkey-220h13.7
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3583 bases
Position: chrKV410806.1:1849019-1852601
Accession: 108921172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008054	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSSFOP00015008067	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSSFOP00015008080	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008169	-	780	XM_018730513	ENSSFOP00015008054	259 (aa)	XP_018586029	A0A1W4YCJ9
ENSSFOT00015008194	-	645	-	ENSSFOP00015008080	214 (aa)	-	-
ENSSFOT00015008182	-	777	-	ENSSFOP00015008067	258 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015005188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005188	rab34	55	40.678	ENSSFOG00015009042	rab11bb	54	40.678
ENSSFOG00015005188	rab34	55	39.831	ENSSFOG00015008618	rab11al	54	39.831
ENSSFOG00015005188	rab34	75	36.932	ENSSFOG00015005464	zgc:171927	82	36.932
ENSSFOG00015005188	rab34	67	31.429	ENSSFOG00015021180	RAB7A	84	31.429
ENSSFOG00015005188	rab34	79	35.096	ENSSFOG00015011140	-	94	35.096
ENSSFOG00015005188	rab34	57	36.000	ENSSFOG00015014517	rab5a	57	36.000
ENSSFOG00015005188	rab34	59	33.846	ENSSFOG00015000053	rab9a	60	33.846
ENSSFOG00015005188	rab34	60	40.764	ENSSFOG00015018421	rab39b	73	40.764
ENSSFOG00015005188	rab34	62	30.189	ENSSFOG00015023790	rheb	85	30.189
ENSSFOG00015005188	rab34	64	37.725	ENSSFOG00015012088	rab42	75	37.725
ENSSFOG00015005188	rab34	62	31.250	ENSSFOG00015012085	rab22a	81	31.250
ENSSFOG00015005188	rab34	65	35.928	ENSSFOG00015012785	rab14	76	35.928
ENSSFOG00015005188	rab34	59	33.077	ENSSFOG00015003259	rab9a	61	33.077
ENSSFOG00015005188	rab34	64	42.553	ENSSFOG00015006175	zgc:101559	61	42.553
ENSSFOG00015005188	rab34	60	31.677	ENSSFOG00015017512	dnajc27	58	31.677
ENSSFOG00015005188	rab34	62	35.000	ENSSFOG00015015336	rab4a	74	35.000
ENSSFOG00015005188	rab34	50	33.019	ENSSFOG00015020319	mras	60	35.897
ENSSFOG00015005188	rab34	79	33.981	ENSSFOG00015021448	-	95	33.981
ENSSFOG00015005188	rab34	60	34.615	ENSSFOG00015016000	-	72	34.615
ENSSFOG00015005188	rab34	64	33.728	ENSSFOG00015009566	si:dkey-13a21.4	81	33.728
ENSSFOG00015005188	rab34	100	74.903	ENSSFOG00015004325	rab34a	100	74.903
ENSSFOG00015005188	rab34	72	36.559	ENSSFOG00015002077	rab6a	85	36.559
ENSSFOG00015005188	rab34	62	30.818	ENSSFOG00015014992	rhebl1	85	30.818
ENSSFOG00015005188	rab34	58	35.714	ENSSFOG00015021115	-	58	35.714
ENSSFOG00015005188	rab34	60	38.854	ENSSFOG00015003628	-	73	38.854
ENSSFOG00015005188	rab34	81	30.332	ENSSFOG00015008657	rab25a	65	30.332
ENSSFOG00015005188	rab34	80	33.645	ENSSFOG00015024042	rab11a	93	33.645
ENSSFOG00015005188	rab34	57	36.000	ENSSFOG00015009988	-	56	36.000
ENSSFOG00015005188	rab34	72	34.409	ENSSFOG00015011268	RAB41	84	34.409
ENSSFOG00015005188	rab34	60	34.848	ENSSFOG00015005076	zgc:100918	64	34.848
ENSSFOG00015005188	rab34	91	51.269	ENSSFOG00015016156	rab36	85	55.505
ENSSFOG00015005188	rab34	63	31.579	ENSSFOG00015020074	DNAJC27	62	31.579
ENSSFOG00015005188	rab34	60	34.848	ENSSFOG00015011771	-	64	34.848
ENSSFOG00015005188	rab34	64	35.758	ENSSFOG00015000865	-	76	35.758
ENSSFOG00015005188	rab34	63	30.370	ENSSFOG00015020738	rabl2	60	30.370
ENSSFOG00015005188	rab34	65	35.928	ENSSFOG00015011318	-	76	35.928
ENSSFOG00015005188	rab34	60	43.846	ENSSFOG00015021754	rab13	79	40.625
ENSSFOG00015005188	rab34	56	44.167	ENSSFOG00015024034	rab33ba	61	43.548
ENSSFOG00015005188	rab34	79	36.715	ENSSFOG00015006076	rab35	96	36.715
ENSSFOG00015005188	rab34	78	36.318	ENSSFOG00015006414	-	91	36.318
ENSSFOG00015005188	rab34	56	37.398	ENSSFOG00015020012	rab7a	59	37.398
ENSSFOG00015005188	rab34	55	44.068	ENSSFOG00015004253	rab33a	54	44.167
ENSSFOG00015005188	rab34	72	35.484	ENSSFOG00015004941	rab41	82	35.484
ENSSFOG00015005188	rab34	58	35.570	ENSSFOG00015012604	rab23	76	37.888
ENSSFOG00015005188	rab34	61	44.615	ENSSFOG00015020836	rab1ba	64	44.615
ENSSFOG00015005188	rab34	73	36.649	ENSSFOG00015020112	rab33b	89	36.269
ENSSFOG00015005188	rab34	64	35.758	ENSSFOG00015015034	rab2a	76	35.758
ENSSFOG00015005188	rab34	79	33.171	ENSSFOG00015019202	RAB6B	93	33.171
ENSSFOG00015005188	rab34	71	34.839	ENSSFOG00015020732	rab42a	81	33.908
ENSSFOG00015005188	rab34	79	31.905	ENSSFOG00015010492	rab9b	96	31.905
ENSSFOG00015005188	rab34	79	35.096	ENSSFOG00015001293	rab1ab	96	35.096
ENSSFOG00015005188	rab34	71	33.333	ENSSFOG00015017296	rab15	92	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005188	rab34	83	75.234	ENSAPOG00000019147	rab34b	97	69.307	Acanthochromis_polyacanthus
ENSSFOG00015005188	rab34	99	64.729	ENSACIG00000004859	rab34b	100	64.729	Amphilophus_citrinellus
ENSSFOG00015005188	rab34	99	71.984	ENSAOCG00000007106	rab34b	94	71.984	Amphiprion_ocellaris
ENSSFOG00015005188	rab34	90	71.795	ENSAPEG00000018607	rab34b	90	68.651	Amphiprion_percula
ENSSFOG00015005188	rab34	93	69.835	ENSATEG00000006851	rab34b	94	69.835	Anabas_testudineus
ENSSFOG00015005188	rab34	99	72.374	ENSACLG00000005733	rab34b	97	72.374	Astatotilapia_calliptera
ENSSFOG00015005188	rab34	100	71.815	ENSAMXG00000006018	rab34b	100	71.815	Astyanax_mexicanus
ENSSFOG00015005188	rab34	91	68.644	ENSCSEG00000018133	rab34b	94	68.644	Cynoglossus_semilaevis
ENSSFOG00015005188	rab34	100	69.112	ENSDARG00000010977	rab34b	99	69.112	Danio_rerio
ENSSFOG00015005188	rab34	99	72.374	ENSELUG00000005597	rab34b	99	72.374	Esox_lucius
ENSSFOG00015005188	rab34	99	71.484	ENSFHEG00000004532	rab34b	100	71.484	Fundulus_heteroclitus
ENSSFOG00015005188	rab34	81	68.900	ENSGMOG00000007140	rab34b	100	68.900	Gadus_morhua
ENSSFOG00015005188	rab34	99	69.650	ENSGACG00000020514	rab34b	99	69.650	Gasterosteus_aculeatus
ENSSFOG00015005188	rab34	99	70.543	ENSIPUG00000024531	rab34	99	70.543	Ictalurus_punctatus
ENSSFOG00015005188	rab34	99	71.484	ENSKMAG00000019341	rab34b	100	71.484	Kryptolebias_marmoratus
ENSSFOG00015005188	rab34	99	70.703	ENSLBEG00000027819	rab34b	100	70.703	Labrus_bergylta
ENSSFOG00015005188	rab34	99	69.922	ENSMAMG00000020214	rab34b	100	69.922	Mastacembelus_armatus
ENSSFOG00015005188	rab34	91	72.034	ENSMMOG00000010936	rab34b	83	72.034	Mola_mola
ENSSFOG00015005188	rab34	91	72.574	ENSMALG00000018499	rab34b	89	72.574	Monopterus_albus
ENSSFOG00015005188	rab34	99	73.047	ENSONIG00000005519	rab34b	100	73.047	Oreochromis_niloticus
ENSSFOG00015005188	rab34	99	71.595	ENSORLG00000003119	rab34b	92	71.595	Oryzias_latipes
ENSSFOG00015005188	rab34	99	71.595	ENSORLG00020016139	rab34b	92	71.595	Oryzias_latipes_hni
ENSSFOG00015005188	rab34	99	71.206	ENSORLG00015000584	rab34b	92	71.206	Oryzias_latipes_hsok
ENSSFOG00015005188	rab34	99	72.656	ENSOMEG00000010334	rab34b	98	71.837	Oryzias_melastigma
ENSSFOG00015005188	rab34	100	81.853	ENSPKIG00000013326	rab34b	100	81.853	Paramormyrops_kingsleyae
ENSSFOG00015005188	rab34	99	68.605	ENSPMGG00000021697	rab34b	100	68.605	Periophthalmus_magnuspinnatus
ENSSFOG00015005188	rab34	99	71.206	ENSPFOG00000011444	rab34b	100	71.206	Poecilia_formosa
ENSSFOG00015005188	rab34	99	71.094	ENSPLAG00000005074	rab34b	100	71.094	Poecilia_latipinna
ENSSFOG00015005188	rab34	99	71.094	ENSPMEG00000013297	rab34b	100	71.094	Poecilia_mexicana
ENSSFOG00015005188	rab34	99	71.094	ENSPREG00000009813	rab34b	100	71.094	Poecilia_reticulata
ENSSFOG00015005188	rab34	99	63.953	ENSPNYG00000017153	rab34b	99	77.966	Pundamilia_nyererei
ENSSFOG00015005188	rab34	93	69.874	ENSPNAG00000015040	rab34b	100	69.874	Pygocentrus_nattereri
ENSSFOG00015005188	rab34	91	72.458	ENSSMAG00000019926	rab34b	100	67.647	Scophthalmus_maximus
ENSSFOG00015005188	rab34	99	71.984	ENSSDUG00000016760	rab34b	80	71.984	Seriola_dumerili
ENSSFOG00015005188	rab34	93	64.824	ENSSLDG00000014812	rab34b	90	76.630	Seriola_lalandi_dorsalis
ENSSFOG00015005188	rab34	99	72.266	ENSSPAG00000002801	rab34b	100	72.266	Stegastes_partitus
ENSSFOG00015005188	rab34	91	69.915	ENSTRUG00000014481	rab34b	96	69.915	Takifugu_rubripes
ENSSFOG00015005188	rab34	99	67.442	ENSTNIG00000016158	rab34b	99	67.442	Tetraodon_nigroviridis