EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015005189 (Gene tree)
Gene ID
108919295
Gene Symbol
atxn1
Alias
atxn1b|si:ch211-125a6.1
Full Name
ataxin 1
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
58678 bases
Position
chrKV411269.1:3439619-3498296
Accession
108919295
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015007901AXHPF08517.121.4e-4111
ENSSFOP00015007907AXHPF08517.121.4e-4111
ENSSFOP00015007912AXHPF08517.121.4e-4111
ENSSFOP00015007917AXHPF08517.121.4e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015008022-2978XM_018727179ENSSFOP00015007907741 (aa)XP_018582695A0A1W4XTJ9
ENSSFOT00015008016-3134-ENSSFOP00015007901741 (aa)-A0A1W4XTJ9
ENSSFOT00015008032-2840XM_018727188ENSSFOP00015007917741 (aa)XP_018582704A0A1W4XTJ9
ENSSFOT00015008027-2749XM_018727178ENSSFOP00015007912741 (aa)XP_018582694A0A1W4XTJ9
Gene Model
Click here to download ENSSFOG00015005189's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005189's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015005189atxn110052.415ENSSFOG00015000179atxn1b10051.387
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015005189atxn110045.401ENSG00000124788ATXN110045.070Homo_sapiens
ENSSFOG00015005189atxn110050.822ENSAPOG00000018662atxn1a10050.528Acanthochromis_polyacanthus
ENSSFOG00015005189atxn19942.541ENSAPOG00000005003atxn1b9942.588Acanthochromis_polyacanthus
ENSSFOG00015005189atxn110046.875ENSAMEG00000004299ATXN110045.509Ailuropoda_melanoleuca
ENSSFOG00015005189atxn110048.005ENSACIG00000016088atxn1a10047.037Amphilophus_citrinellus
ENSSFOG00015005189atxn19944.600ENSACIG00000014661atxn1b9843.766Amphilophus_citrinellus
ENSSFOG00015005189atxn19942.272ENSAOCG00000019715atxn1b9942.706Amphiprion_ocellaris
ENSSFOG00015005189atxn110051.001ENSAOCG00000015796atxn1a10050.000Amphiprion_ocellaris
ENSSFOG00015005189atxn19942.155ENSAPEG00000022436atxn1b9942.588Amphiprion_percula
ENSSFOG00015005189atxn110051.001ENSAPEG00000011313atxn1a10050.236Amphiprion_percula
ENSSFOG00015005189atxn19942.708ENSATEG00000002982atxn1b9942.407Anabas_testudineus
ENSSFOG00015005189atxn110049.880ENSATEG00000013601atxn1a10050.484Anabas_testudineus
ENSSFOG00015005189atxn110047.031ENSACAG00000003919ATXN110046.755Anolis_carolinensis
ENSSFOG00015005189atxn19945.978ENSANAG00000025206-9545.878Aotus_nancymaae
ENSSFOG00015005189atxn17941.141ENSANAG00000025424-9641.159Aotus_nancymaae
ENSSFOG00015005189atxn19942.117ENSACLG00000005697atxn1b9941.820Astatotilapia_calliptera
ENSSFOG00015005189atxn110049.587ENSACLG00000015429atxn1a10049.052Astatotilapia_calliptera
ENSSFOG00015005189atxn19939.607ENSAMXG00000017432atxn1b9838.702Astyanax_mexicanus
ENSSFOG00015005189atxn110055.377ENSAMXG00000042368atxn1a10056.646Astyanax_mexicanus
ENSSFOG00015005189atxn110045.745ENSBTAG00000019675ATXN110044.734Bos_taurus
ENSSFOG00015005189atxn19946.339ENSCJAG00000006563ATXN19446.098Callithrix_jacchus
ENSSFOG00015005189atxn110045.755ENSCAFG00000009934ATXN110045.054Canis_familiaris
ENSSFOG00015005189atxn19945.519ENSCAFG00020012647ATXN19544.718Canis_lupus_dingo
ENSSFOG00015005189atxn110045.738ENSCHIG00000018697ATXN110045.006Capra_hircus
ENSSFOG00015005189atxn15864.379ENSTSYG00000000858ATXN19362.745Carlito_syrichta
ENSSFOG00015005189atxn110047.066ENSCAPG00000013095ATXN110046.191Cavia_aperea
ENSSFOG00015005189atxn110047.279ENSCPOG00000022869ATXN110046.398Cavia_porcellus
ENSSFOG00015005189atxn110046.747ENSCCAG00000018590ATXN110046.246Cebus_capucinus
ENSSFOG00015005189atxn110045.907ENSCATG00000042777ATXN110045.336Cercocebus_atys
ENSSFOG00015005189atxn110047.279ENSCLAG00000002212ATXN110046.764Chinchilla_lanigera
ENSSFOG00015005189atxn110046.017ENSCSAG00000007589ATXN110045.444Chlorocebus_sabaeus
ENSSFOG00015005189atxn110048.259ENSCPBG00000022373ATXN110047.608Chrysemys_picta_bellii
ENSSFOG00015005189atxn110046.237ENSCANG00000033673ATXN110045.660Colobus_angolensis_palliatus
ENSSFOG00015005189atxn110047.653ENSCGRG00001022108Atxn110046.691Cricetulus_griseus_chok1gshd
ENSSFOG00015005189atxn110048.117ENSCGRG00000014084Atxn110047.145Cricetulus_griseus_crigri
ENSSFOG00015005189atxn19943.902ENSCSEG00000004666atxn1b9943.719Cynoglossus_semilaevis
ENSSFOG00015005189atxn110047.258ENSCSEG00000017647atxn1a10047.251Cynoglossus_semilaevis
ENSSFOG00015005189atxn110049.157ENSCVAG00000023240atxn1a10048.375Cyprinodon_variegatus
ENSSFOG00015005189atxn19941.705ENSCVAG00000010945atxn1b9941.272Cyprinodon_variegatus
ENSSFOG00015005189atxn110055.487ENSDARG00000061687atxn1a10054.847Danio_rerio
ENSSFOG00015005189atxn19941.618ENSDARG00000060862atxn1b9940.534Danio_rerio
ENSSFOG00015005189atxn16061.481ENSDNOG00000048471ATXN18761.481Dasypus_novemcinctus
ENSSFOG00015005189atxn110046.071ENSDORG00000005940Atxn110045.084Dipodomys_ordii
ENSSFOG00015005189atxn18557.059ENSETEG00000003815ATXN18758.989Echinops_telfairi
ENSSFOG00015005189atxn110046.391ENSEASG00005011799ATXN110045.444Equus_asinus_asinus
ENSSFOG00015005189atxn110045.614ENSECAG00000009251ATXN110045.142Equus_caballus
ENSSFOG00015005189atxn110046.738ENSEEUG00000007120ATXN110046.145Erinaceus_europaeus
ENSSFOG00015005189atxn19948.853ENSELUG00000003691atxn1a9648.454Esox_lucius
ENSSFOG00015005189atxn19446.914ENSELUG00000001311atxn1b7546.914Esox_lucius
ENSSFOG00015005189atxn110047.101ENSFCAG00000011298ATXN110046.618Felis_catus
ENSSFOG00015005189atxn110047.292ENSFALG00000013400ATXN110046.924Ficedula_albicollis
ENSSFOG00015005189atxn18760.345ENSFDAG00000020905ATXN19859.113Fukomys_damarensis
ENSSFOG00015005189atxn110048.873ENSFHEG00000019419atxn1a10047.562Fundulus_heteroclitus
ENSSFOG00015005189atxn19942.824ENSFHEG00000017226atxn1b9942.111Fundulus_heteroclitus
ENSSFOG00015005189atxn19943.681ENSGMOG00000013508atxn1b9943.719Gadus_morhua
ENSSFOG00015005189atxn110048.251ENSGALG00000012709ATXN110046.845Gallus_gallus
ENSSFOG00015005189atxn110049.043ENSGAFG00000010544atxn1a10048.019Gambusia_affinis
ENSSFOG00015005189atxn19942.293ENSGAFG00000007295atxn1b9941.383Gambusia_affinis
ENSSFOG00015005189atxn19944.045ENSGACG00000008747atxn1b9942.629Gasterosteus_aculeatus
ENSSFOG00015005189atxn110047.051ENSGACG00000003472atxn1a10046.030Gasterosteus_aculeatus
ENSSFOG00015005189atxn110048.019ENSGAGG00000006868ATXN110047.602Gopherus_agassizii
ENSSFOG00015005189atxn110045.595ENSGGOG00000004169ATXN110045.142Gorilla_gorilla
ENSSFOG00015005189atxn19941.820ENSHBUG00000016081atxn1b9941.705Haplochromis_burtoni
ENSSFOG00015005189atxn110049.823ENSHBUG00000002508atxn1a10049.289Haplochromis_burtoni
ENSSFOG00015005189atxn110047.642ENSHGLG00000009360ATXN110047.066Heterocephalus_glaber_female
ENSSFOG00015005189atxn110047.642ENSHGLG00100003038ATXN110047.066Heterocephalus_glaber_male
ENSSFOG00015005189atxn110045.547ENSHCOG00000019032atxn1a10045.031Hippocampus_comes
ENSSFOG00015005189atxn110043.017ENSHCOG00000014835atxn1b9943.671Hippocampus_comes
ENSSFOG00015005189atxn19942.267ENSIPUG00000002088atxn1b9941.509Ictalurus_punctatus
ENSSFOG00015005189atxn110055.860ENSIPUG00000001402atxn110053.750Ictalurus_punctatus
ENSSFOG00015005189atxn110047.381ENSSTOG00000025423ATXN110046.650Ictidomys_tridecemlineatus
ENSSFOG00015005189atxn110047.431ENSJJAG00000000377Atxn110046.803Jaculus_jaculus
ENSSFOG00015005189atxn19941.319ENSKMAG00000013507atxn1b9940.771Kryptolebias_marmoratus
ENSSFOG00015005189atxn110047.619ENSKMAG00000007216atxn1a10046.809Kryptolebias_marmoratus
ENSSFOG00015005189atxn110043.035ENSLBEG00000024264atxn1b9942.346Labrus_bergylta
ENSSFOG00015005189atxn110049.941ENSLBEG00000024388atxn1a10050.117Labrus_bergylta
ENSSFOG00015005189atxn110049.697ENSLACG00000005371ATXN110048.965Latimeria_chalumnae
ENSSFOG00015005189atxn110059.157ENSLOCG00000002910atxn1a10058.534Lepisosteus_oculatus
ENSSFOG00015005189atxn110046.852ENSLAFG00000015231ATXN110046.545Loxodonta_africana
ENSSFOG00015005189atxn110045.799ENSMFAG00000032779ATXN110045.230Macaca_fascicularis
ENSSFOG00015005189atxn110045.917ENSMMUG00000002940ATXN110045.347Macaca_mulatta
ENSSFOG00015005189atxn110045.907ENSMNEG00000036667ATXN110045.336Macaca_nemestrina
ENSSFOG00015005189atxn110047.619ENSMLEG00000040480ATXN19564.583Mandrillus_leucophaeus
ENSSFOG00015005189atxn110049.057ENSMAMG00000014004atxn1a10048.996Mastacembelus_armatus
ENSSFOG00015005189atxn19941.801ENSMAMG00000011503atxn1b9941.801Mastacembelus_armatus
ENSSFOG00015005189atxn19942.117ENSMZEG00005015064atxn1b9941.820Maylandia_zebra
ENSSFOG00015005189atxn110049.587ENSMZEG00005003602atxn1a10049.052Maylandia_zebra
ENSSFOG00015005189atxn110047.002ENSMGAG00000003028ATXN110046.416Meleagris_gallopavo
ENSSFOG00015005189atxn110048.333ENSMAUG00000011491Atxn110046.924Mesocricetus_auratus
ENSSFOG00015005189atxn110047.470ENSMICG00000011875ATXN110046.627Microcebus_murinus
ENSSFOG00015005189atxn110047.400ENSMOCG00000001527Atxn110046.190Microtus_ochrogaster
ENSSFOG00015005189atxn110050.605ENSMMOG00000018593atxn1a10050.121Mola_mola
ENSSFOG00015005189atxn19942.551ENSMMOG00000002884atxn1b9942.623Mola_mola
ENSSFOG00015005189atxn110047.596ENSMODG00000010827ATXN110047.017Monodelphis_domestica
ENSSFOG00015005189atxn110049.823ENSMALG00000005209atxn1a10049.822Monopterus_albus
ENSSFOG00015005189atxn19944.670ENSMALG00000012137atxn1b9944.148Monopterus_albus
ENSSFOG00015005189atxn110048.987MGP_CAROLIEiJ_G0018479Atxn110047.419Mus_caroli
ENSSFOG00015005189atxn110048.798ENSMUSG00000046876Atxn110047.215Mus_musculus
ENSSFOG00015005189atxn110048.395MGP_PahariEiJ_G0019546Atxn110047.059Mus_pahari
ENSSFOG00015005189atxn110048.438MGP_SPRETEiJ_G0019357Atxn110046.909Mus_spretus
ENSSFOG00015005189atxn110046.145ENSMPUG00000005398ATXN110045.272Mustela_putorius_furo
ENSSFOG00015005189atxn110046.265ENSMLUG00000000896ATXN110045.235Myotis_lucifugus
ENSSFOG00015005189atxn110047.705ENSNGAG00000020481Atxn110046.618Nannospalax_galili
ENSSFOG00015005189atxn19944.289ENSNBRG00000014776atxn1b9844.036Neolamprologus_brichardi
ENSSFOG00015005189atxn110049.588ENSNBRG00000013216atxn1a10049.054Neolamprologus_brichardi
ENSSFOG00015005189atxn110046.098ENSNLEG00000001064ATXN110045.520Nomascus_leucogenys
ENSSFOG00015005189atxn19945.864ENSMEUG00000014680ATXN19645.377Notamacropus_eugenii
ENSSFOG00015005189atxn110046.433ENSOPRG00000004813ATXN110046.796Ochotona_princeps
ENSSFOG00015005189atxn110046.403ENSODEG00000006297ATXN110046.005Octodon_degus
ENSSFOG00015005189atxn19943.664ENSONIG00000003094atxn1b9943.571Oreochromis_niloticus
ENSSFOG00015005189atxn18840.026ENSOANG00000011866ATXN19640.132Ornithorhynchus_anatinus
ENSSFOG00015005189atxn110047.094ENSOCUG00000015360ATXN110046.610Oryctolagus_cuniculus
ENSSFOG00015005189atxn110048.255ENSORLG00000013003atxn1a9947.497Oryzias_latipes
ENSSFOG00015005189atxn19942.459ENSORLG00020013514atxn1b9152.143Oryzias_latipes_hni
ENSSFOG00015005189atxn110048.492ENSORLG00020006722atxn1a9947.858Oryzias_latipes_hni
ENSSFOG00015005189atxn110048.854ENSORLG00015014668atxn1a9947.858Oryzias_latipes_hsok
ENSSFOG00015005189atxn19943.158ENSORLG00015019876atxn1b9151.601Oryzias_latipes_hsok
ENSSFOG00015005189atxn19943.208ENSOMEG00000003259atxn1b9941.913Oryzias_melastigma
ENSSFOG00015005189atxn110049.268ENSOMEG00000012883atxn1a9848.175Oryzias_melastigma
ENSSFOG00015005189atxn19946.545ENSOGAG00000028623ATXN110045.808Otolemur_garnettii
ENSSFOG00015005189atxn17648.595ENSOARG00000012141ATXN17848.764Ovis_aries
ENSSFOG00015005189atxn110045.562ENSPPAG00000028993ATXN110045.230Pan_paniscus
ENSSFOG00015005189atxn110051.338ENSPPRG00000004547ATXN19950.079Panthera_pardus
ENSSFOG00015005189atxn110045.724ENSPTRG00000039250ATXN110045.390Pan_troglodytes
ENSSFOG00015005189atxn19945.843ENSPANG00000024249ATXN19945.207Papio_anubis
ENSSFOG00015005189atxn110052.842ENSPKIG00000018323atxn1b10053.341Paramormyrops_kingsleyae
ENSSFOG00015005189atxn110063.077ENSPKIG00000003054atxn1a10062.580Paramormyrops_kingsleyae
ENSSFOG00015005189atxn17642.857ENSPSIG00000007158ATXN19242.331Pelodiscus_sinensis
ENSSFOG00015005189atxn19943.346ENSPMGG00000013610atxn1b9943.671Periophthalmus_magnuspinnatus
ENSSFOG00015005189atxn18848.750ENSPMGG00000022926atxn1a9150.000Periophthalmus_magnuspinnatus
ENSSFOG00015005189atxn110048.372ENSPEMG00000014930Atxn110047.145Peromyscus_maniculatus_bairdii
ENSSFOG00015005189atxn110047.784ENSPCIG00000019413ATXN110047.087Phascolarctos_cinereus
ENSSFOG00015005189atxn110049.460ENSPFOG00000014422atxn1a10049.100Poecilia_formosa
ENSSFOG00015005189atxn19943.694ENSPLAG00000018703atxn1b9843.112Poecilia_latipinna
ENSSFOG00015005189atxn110049.294ENSPLAG00000018978atxn1a10050.448Poecilia_latipinna
ENSSFOG00015005189atxn19941.444ENSPMEG00000023723atxn1b9941.375Poecilia_mexicana
ENSSFOG00015005189atxn110049.701ENSPMEG00000002647atxn1a10049.161Poecilia_mexicana
ENSSFOG00015005189atxn110050.060ENSPREG00000008333atxn1a10049.222Poecilia_reticulata
ENSSFOG00015005189atxn19943.093ENSPREG00000020308atxn1b9843.020Poecilia_reticulata
ENSSFOG00015005189atxn110045.498ENSPPYG00000016254ATXN110044.988Pongo_abelii
ENSSFOG00015005189atxn17064.103ENSPCAG00000008196ATXN16363.136Procavia_capensis
ENSSFOG00015005189atxn110047.470ENSPCOG00000013612ATXN110046.627Propithecus_coquereli
ENSSFOG00015005189atxn19151.712ENSPVAG00000016937ATXN18650.000Pteropus_vampyrus
ENSSFOG00015005189atxn110049.351ENSPNYG00000011920atxn1a10048.815Pundamilia_nyererei
ENSSFOG00015005189atxn19944.289ENSPNYG00000017095atxn1b9844.162Pundamilia_nyererei
ENSSFOG00015005189atxn110057.442ENSPNAG00000010587atxn1a10056.458Pygocentrus_nattereri
ENSSFOG00015005189atxn19939.744ENSPNAG00000001226atxn1b9939.461Pygocentrus_nattereri
ENSSFOG00015005189atxn110048.801ENSRNOG00000016998Atxn110047.648Rattus_norvegicus
ENSSFOG00015005189atxn110045.759ENSRBIG00000028213ATXN110045.541Rhinopithecus_bieti
ENSSFOG00015005189atxn110046.034ENSRROG00000032751ATXN110045.813Rhinopithecus_roxellana
ENSSFOG00015005189atxn17837.792ENSSBOG00000030307-9137.152Saimiri_boliviensis_boliviensis
ENSSFOG00015005189atxn110046.347ENSSBOG00000017381-10046.126Saimiri_boliviensis_boliviensis
ENSSFOG00015005189atxn19941.427ENSSMAG00000019621atxn1b9942.037Scophthalmus_maximus
ENSSFOG00015005189atxn19950.240ENSSMAG00000007731atxn1a9450.060Scophthalmus_maximus
ENSSFOG00015005189atxn110051.116ENSSDUG00000011376atxn1a10050.825Seriola_dumerili
ENSSFOG00015005189atxn19941.581ENSSDUG00000006990atxn1b9942.276Seriola_dumerili
ENSSFOG00015005189atxn19941.695ENSSLDG00000016306atxn1b9942.393Seriola_lalandi_dorsalis
ENSSFOG00015005189atxn110050.881ENSSLDG00000013505atxn1a10050.590Seriola_lalandi_dorsalis
ENSSFOG00015005189atxn110047.464ENSSPUG00000016650ATXN110047.030Sphenodon_punctatus
ENSSFOG00015005189atxn110050.881ENSSPAG00000019849atxn1a10050.469Stegastes_partitus
ENSSFOG00015005189atxn19943.829ENSSPAG00000003388atxn1b9944.931Stegastes_partitus
ENSSFOG00015005189atxn110045.476ENSSSCG00000001065ATXN110044.872Sus_scrofa
ENSSFOG00015005189atxn110046.163ENSTGUG00000005986ATXN110045.421Taeniopygia_guttata
ENSSFOG00015005189atxn17254.281ENSTRUG00000014645atxn1a10048.970Takifugu_rubripes
ENSSFOG00015005189atxn19942.099ENSTRUG00000024789atxn1b9941.667Takifugu_rubripes
ENSSFOG00015005189atxn110049.317ENSTNIG00000005089atxn1a10049.064Tetraodon_nigroviridis
ENSSFOG00015005189atxn110043.313ENSTNIG00000018398atxn1b10042.432Tetraodon_nigroviridis
ENSSFOG00015005189atxn110045.422ENSTTRG00000014678ATXN19645.212Tursiops_truncatus
ENSSFOG00015005189atxn110046.403ENSUAMG00000004064ATXN110045.465Ursus_americanus
ENSSFOG00015005189atxn15852.700ENSUMAG00000017635-9450.964Ursus_maritimus
ENSSFOG00015005189atxn110045.647ENSVVUG00000003386ATXN110044.848Vulpes_vulpes
ENSSFOG00015005189atxn110044.511ENSXETG00000014184atxn110044.189Xenopus_tropicalis
ENSSFOG00015005189atxn19941.975ENSXCOG00000019714atxn1b9841.366Xiphophorus_couchianus
ENSSFOG00015005189atxn110050.809ENSXCOG00000020061atxn1a10050.560Xiphophorus_couchianus
ENSSFOG00015005189atxn19941.327ENSXMAG00000014270atxn1b9940.978Xiphophorus_maculatus
ENSSFOG00015005189atxn110049.940ENSXMAG00000003615atxn1a10049.400Xiphophorus_maculatus

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