EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005346 (Gene tree)
Gene ID: 108919942
Gene Symbol: cirbpb
Alias: -
Full Name: cold-inducible RNA-binding protein B-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5955 bases
Position: chrKV411278.1:3575699-3581653
Accession: 108919942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008154	RRM_1	PF00076.22	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008271	-	4609	XM_018728369	ENSSFOP00015008154	187 (aa)	XP_018583885	A0A1W4Y602

Gene Model

Click here to download ENSSFOG00015005346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005346	cirbpb	84	38.158	ENSSFOG00015021687	-	51	38.158
ENSSFOG00015005346	cirbpb	58	34.259	ENSSFOG00015020292	srsf4	63	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005346	cirbpb	100	61.170	ENSACIG00000016116	cirbpa	100	55.851	Amphilophus_citrinellus
ENSSFOG00015005346	cirbpb	100	58.289	ENSAOCG00000016212	cirbpa	100	52.020	Amphiprion_ocellaris
ENSSFOG00015005346	cirbpb	100	63.492	ENSATEG00000014985	cirbpa	100	61.497	Anabas_testudineus
ENSSFOG00015005346	cirbpb	100	61.702	ENSACLG00000002094	-	99	60.870	Astatotilapia_calliptera
ENSSFOG00015005346	cirbpb	100	67.805	ENSAMXG00000015612	cirbpb	84	65.534	Astyanax_mexicanus
ENSSFOG00015005346	cirbpb	100	68.421	ENSCVAG00000004853	cirbpa	100	60.106	Cyprinodon_variegatus
ENSSFOG00015005346	cirbpb	100	67.788	ENSDARG00000013351	cirbpb	92	68.599	Danio_rerio
ENSSFOG00015005346	cirbpb	99	64.362	ENSFHEG00000002580	cirbpa	100	55.376	Fundulus_heteroclitus
ENSSFOG00015005346	cirbpb	98	60.622	ENSGMOG00000007179	cirbpb	93	58.247	Gadus_morhua
ENSSFOG00015005346	cirbpb	100	68.421	ENSGAFG00000008654	cirbpa	100	61.170	Gambusia_affinis
ENSSFOG00015005346	cirbpb	100	60.638	ENSHBUG00000022060	cirbpa	100	61.702	Haplochromis_burtoni
ENSSFOG00015005346	cirbpb	100	64.706	ENSKMAG00000005905	cirbpa	100	57.812	Kryptolebias_marmoratus
ENSSFOG00015005346	cirbpb	100	57.592	ENSLBEG00000000292	cirbpa	100	56.383	Labrus_bergylta
ENSSFOG00015005346	cirbpb	100	63.021	ENSMAMG00000010168	cirbpa	100	61.497	Mastacembelus_armatus
ENSSFOG00015005346	cirbpb	100	60.638	ENSMZEG00005025577	-	100	61.702	Maylandia_zebra
ENSSFOG00015005346	cirbpb	100	62.766	ENSMALG00000020092	cirbpa	100	57.219	Monopterus_albus
ENSSFOG00015005346	cirbpb	100	60.638	ENSNBRG00000019658	cirbpa	100	61.702	Neolamprologus_brichardi
ENSSFOG00015005346	cirbpb	100	60.106	ENSONIG00000010169	cirbpa	100	55.851	Oreochromis_niloticus
ENSSFOG00015005346	cirbpb	100	63.102	ENSORLG00000015433	cirbpa	100	58.824	Oryzias_latipes
ENSSFOG00015005346	cirbpb	100	63.102	ENSORLG00020016909	cirbpa	100	58.824	Oryzias_latipes_hni
ENSSFOG00015005346	cirbpb	100	63.102	ENSORLG00015016636	cirbpa	100	58.824	Oryzias_latipes_hsok
ENSSFOG00015005346	cirbpb	100	64.171	ENSOMEG00000021469	cirbpa	73	58.824	Oryzias_melastigma
ENSSFOG00015005346	cirbpb	55	89.320	ENSPKIG00000010561	cirbpa	100	78.125	Paramormyrops_kingsleyae
ENSSFOG00015005346	cirbpb	99	60.963	ENSPMGG00000017342	cirbpa	95	55.556	Periophthalmus_magnuspinnatus
ENSSFOG00015005346	cirbpb	100	66.667	ENSPFOG00000015653	cirbpa	100	60.526	Poecilia_formosa
ENSSFOG00015005346	cirbpb	99	66.842	ENSPLAG00000011125	cirbpa	100	60.638	Poecilia_latipinna
ENSSFOG00015005346	cirbpb	100	67.016	ENSPMEG00000013878	cirbpa	100	60.847	Poecilia_mexicana
ENSSFOG00015005346	cirbpb	99	66.667	ENSPREG00000018042	cirbpa	98	58.289	Poecilia_reticulata
ENSSFOG00015005346	cirbpb	100	60.638	ENSPNYG00000007198	-	100	61.702	Pundamilia_nyererei
ENSSFOG00015005346	cirbpb	100	70.297	ENSPNAG00000019997	cirbpb	100	66.995	Pygocentrus_nattereri
ENSSFOG00015005346	cirbpb	100	57.789	ENSSMAG00000002412	cirbpa	100	57.000	Scophthalmus_maximus
ENSSFOG00015005346	cirbpb	100	65.241	ENSTRUG00000010187	cirbpa	100	57.754	Takifugu_rubripes
ENSSFOG00015005346	cirbpb	100	59.067	ENSTNIG00000000450	cirbpa	100	59.474	Tetraodon_nigroviridis
ENSSFOG00015005346	cirbpb	99	66.667	ENSXCOG00000008262	cirbpa	92	72.603	Xiphophorus_couchianus
ENSSFOG00015005346	cirbpb	100	67.895	ENSXMAG00000019336	cirbpa	100	59.043	Xiphophorus_maculatus