EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSFOG00015005362 (Gene tree)
Gene ID
108932039
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
27801 bases
Position
chrKV410985.1:554754-582554
Accession
108932039
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015008168tRNA_anti-codonPF01336.256.6e-1311
ENSSFOP00015008197tRNA_anti-codonPF01336.256.9e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015008285-5120-ENSSFOP00015008168621 (aa)--
ENSSFOT00015008314-2849XM_018748187ENSSFOP00015008197649 (aa)XP_018603703A0A1W4ZJ13
Gene Model
Click here to download ENSSFOG00015005362's gene model file
Pathways
Pathway IDPathway NameSource
sfm03030DNA replicationKEGG
sfm03420Nucleotide excision repairKEGG
sfm03430Mismatch repairKEGG
sfm03440Homologous recombinationKEGG
sfm03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005362's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015005362rpa19278.405ENSAPOG00000011658rpa110077.583Acanthochromis_polyacanthus
ENSSFOG00015005362rpa18869.824ENSAPOG00000019409RPA19069.824Acanthochromis_polyacanthus
ENSSFOG00015005362rpa19065.167ENSAMEG00000007706RPA19765.167Ailuropoda_melanoleuca
ENSSFOG00015005362rpa18865.593ENSACIG00000012881RPA19965.593Amphilophus_citrinellus
ENSSFOG00015005362rpa18871.379ENSACIG00000007277rpa19971.379Amphilophus_citrinellus
ENSSFOG00015005362rpa19260.769ENSAOCG00000009003RPA110061.598Amphiprion_ocellaris
ENSSFOG00015005362rpa19279.070ENSAOCG00000023376rpa110078.735Amphiprion_ocellaris
ENSSFOG00015005362rpa19279.236ENSAPEG00000008634rpa19979.236Amphiprion_percula
ENSSFOG00015005362rpa19259.098ENSAPEG00000019132RPA110060.150Amphiprion_percula
ENSSFOG00015005362rpa19262.423ENSATEG00000006443RPA110062.423Anabas_testudineus
ENSSFOG00015005362rpa18878.609ENSATEG00000022024rpa110078.609Anabas_testudineus
ENSSFOG00015005362rpa19054.613ENSAPLG00000012442RPA19954.613Anas_platyrhynchos
ENSSFOG00015005362rpa19256.444ENSACAG00000014490RPA19957.903Anolis_carolinensis
ENSSFOG00015005362rpa18866.044ENSANAG00000023456RPA19866.044Aotus_nancymaae
ENSSFOG00015005362rpa19263.594ENSACLG00000005223RPA19963.594Astatotilapia_calliptera
ENSSFOG00015005362rpa18681.206ENSACLG00000006640rpa19981.206Astatotilapia_calliptera
ENSSFOG00015005362rpa19280.132ENSAMXG00000008418rpa110081.291Astyanax_mexicanus
ENSSFOG00015005362rpa19263.902ENSBTAG00000009711RPA19963.902Bos_taurus
ENSSFOG00015005362rpa19263.889ENSCJAG00000001848RPA19964.052Callithrix_jacchus
ENSSFOG00015005362rpa19264.379ENSCAFG00000019249RPA19964.379Canis_familiaris
ENSSFOG00015005362rpa19264.379ENSCAFG00020009847RPA19964.379Canis_lupus_dingo
ENSSFOG00015005362rpa19264.065ENSCHIG00000026308RPA19964.390Capra_hircus
ENSSFOG00015005362rpa19264.437ENSTSYG00000003482-9964.437Carlito_syrichta
ENSSFOG00015005362rpa19263.072ENSCPOG00000000035RPA19963.072Cavia_porcellus
ENSSFOG00015005362rpa19253.496ENSCCAG00000010981RPA19953.659Cebus_capucinus
ENSSFOG00015005362rpa19263.681ENSCLAG00000005185-9963.681Chinchilla_lanigera
ENSSFOG00015005362rpa19260.261ENSCLAG00000015045-9960.261Chinchilla_lanigera
ENSSFOG00015005362rpa19254.634ENSCSAG00000013833RPA19954.797Chlorocebus_sabaeus
ENSSFOG00015005362rpa16772.350ENSCHOG00000009454-9972.350Choloepus_hoffmanni
ENSSFOG00015005362rpa18864.726ENSCHOG00000013540-9964.726Choloepus_hoffmanni
ENSSFOG00015005362rpa19264.169ENSCPBG00000020377RPA19965.439Chrysemys_picta_bellii
ENSSFOG00015005362rpa19144.518ENSCING00000023482-9944.518Ciona_intestinalis
ENSSFOG00015005362rpa19065.753ENSCANG00000030911RPA19965.753Colobus_angolensis_palliatus
ENSSFOG00015005362rpa19264.019ENSCGRG00001008197Rpa19964.182Cricetulus_griseus_chok1gshd
ENSSFOG00015005362rpa17566.008ENSCGRG00000000582Rpa19966.206Cricetulus_griseus_crigri
ENSSFOG00015005362rpa19257.937ENSCSEG00000012726RPA19959.316Cynoglossus_semilaevis
ENSSFOG00015005362rpa19274.794ENSCSEG00000013066rpa19974.794Cynoglossus_semilaevis
ENSSFOG00015005362rpa19277.815ENSCVAG00000019431rpa110078.723Cyprinodon_variegatus
ENSSFOG00015005362rpa19167.728ENSCVAG00000013446-9567.015Cyprinodon_variegatus
ENSSFOG00015005362rpa19277.741ENSDARG00000003938rpa110077.741Danio_rerio
ENSSFOG00015005362rpa19166.174ENSDNOG00000017218RPA19966.174Dasypus_novemcinctus
ENSSFOG00015005362rpa19264.869ENSDORG00000006199Rpa19964.869Dipodomys_ordii
ENSSFOG00015005362rpa19243.230FBgn0010173RpA-709843.719Drosophila_melanogaster
ENSSFOG00015005362rpa17674.737ENSETEG00000017608RPA18274.737Echinops_telfairi
ENSSFOG00015005362rpa19065.604ENSEASG00005009372RPA19964.613Equus_asinus_asinus
ENSSFOG00015005362rpa19264.542ENSECAG00000023886RPA19964.542Equus_caballus
ENSSFOG00015005362rpa16472.076ENSEEUG00000002186-6872.076Erinaceus_europaeus
ENSSFOG00015005362rpa18165.974ENSELUG00000006136RPA19965.974Esox_lucius
ENSSFOG00015005362rpa19280.693ENSELUG00000021071rpa19980.858Esox_lucius
ENSSFOG00015005362rpa19264.437ENSFCAG00000006306RPA19964.437Felis_catus
ENSSFOG00015005362rpa19263.502ENSFALG00000006575RPA19963.502Ficedula_albicollis
ENSSFOG00015005362rpa19264.869ENSFDAG00000007720RPA19964.869Fukomys_damarensis
ENSSFOG00015005362rpa19277.355ENSFHEG00000003580rpa19977.355Fundulus_heteroclitus
ENSSFOG00015005362rpa19274.833ENSGMOG00000010382rpa19974.833Gadus_morhua
ENSSFOG00015005362rpa19262.726ENSGALG00000003072RPA19962.726Gallus_gallus
ENSSFOG00015005362rpa19260.366ENSGAFG00000020953RPA19960.518Gambusia_affinis
ENSSFOG00015005362rpa19277.243ENSGAFG00000012916rpa19977.243Gambusia_affinis
ENSSFOG00015005362rpa19276.949ENSGACG00000010856rpa19976.949Gasterosteus_aculeatus
ENSSFOG00015005362rpa19263.844ENSGAGG00000013611RPA19963.844Gopherus_agassizii
ENSSFOG00015005362rpa19265.563ENSGGOG00000014186RPA19965.563Gorilla_gorilla
ENSSFOG00015005362rpa18859.826ENSHBUG00000009348RPA19859.826Haplochromis_burtoni
ENSSFOG00015005362rpa19281.095ENSHBUG00000017773rpa19981.095Haplochromis_burtoni
ENSSFOG00015005362rpa19264.052ENSHGLG00000008846RPA19964.379Heterocephalus_glaber_female
ENSSFOG00015005362rpa19253.971ENSHGLG00100002005-9953.971Heterocephalus_glaber_male
ENSSFOG00015005362rpa19260.784ENSHGLG00100000799-9960.784Heterocephalus_glaber_male
ENSSFOG00015005362rpa19264.052ENSHGLG00100017755-9964.379Heterocephalus_glaber_male
ENSSFOG00015005362rpa19246.346ENSHCOG00000000351RPA19846.346Hippocampus_comes
ENSSFOG00015005362rpa19270.164ENSHCOG00000001401rpa19971.522Hippocampus_comes
ENSSFOG00015005362rpa19279.276ENSIPUG00000004400rpa19979.441Ictalurus_punctatus
ENSSFOG00015005362rpa18464.386ENSSTOG00000022475RPA19564.386Ictidomys_tridecemlineatus
ENSSFOG00015005362rpa18865.417ENSJJAG00000000876Rpa19865.417Jaculus_jaculus
ENSSFOG00015005362rpa19275.738ENSKMAG00000005605rpa19975.941Kryptolebias_marmoratus
ENSSFOG00015005362rpa19262.336ENSKMAG00000000234RPA19962.336Kryptolebias_marmoratus
ENSSFOG00015005362rpa18971.394ENSLBEG00000002281RPA18271.041Labrus_bergylta
ENSSFOG00015005362rpa19277.318ENSLBEG00000021604rpa19977.318Labrus_bergylta
ENSSFOG00015005362rpa17463.030ENSLACG00000007210RPA19963.030Latimeria_chalumnae
ENSSFOG00015005362rpa19273.884ENSLOCG00000006397rpa110073.884Lepisosteus_oculatus
ENSSFOG00015005362rpa19163.430ENSLAFG00000015354RPA19963.430Loxodonta_africana
ENSSFOG00015005362rpa17962.103ENSMFAG00000036138-9962.302Macaca_fascicularis
ENSSFOG00015005362rpa19164.735ENSMMUG00000011604-9964.942Macaca_mulatta
ENSSFOG00015005362rpa19260.461ENSMMUG00000002442-9960.461Macaca_mulatta
ENSSFOG00015005362rpa18265.443ENSMNEG00000029837-9865.443Macaca_nemestrina
ENSSFOG00015005362rpa19263.339ENSMNEG00000031632-9963.502Macaca_nemestrina
ENSSFOG00015005362rpa19060.963ENSMLEG00000038768-9961.296Mandrillus_leucophaeus
ENSSFOG00015005362rpa19171.926ENSMAMG00000020097RPA19370.044Mastacembelus_armatus
ENSSFOG00015005362rpa19280.399ENSMAMG00000017993rpa19980.399Mastacembelus_armatus
ENSSFOG00015005362rpa19280.929ENSMZEG00005007551rpa19980.929Maylandia_zebra
ENSSFOG00015005362rpa19263.594ENSMZEG00005024731RPA19963.594Maylandia_zebra
ENSSFOG00015005362rpa19161.960ENSMGAG00000005315RPA19861.960Meleagris_gallopavo
ENSSFOG00015005362rpa19064.942ENSMAUG00000010474Rpa19965.109Mesocricetus_auratus
ENSSFOG00015005362rpa19264.658ENSMICG00000012867RPA19965.309Microcebus_murinus
ENSSFOG00015005362rpa19264.216ENSMOCG00000013019Rpa19964.216Microtus_ochrogaster
ENSSFOG00015005362rpa19276.412ENSMMOG00000014292rpa110078.216Mola_mola
ENSSFOG00015005362rpa19165.372ENSMMOG00000010868RPA19865.372Mola_mola
ENSSFOG00015005362rpa19263.740ENSMODG00000010549RPA19963.740Monodelphis_domestica
ENSSFOG00015005362rpa19270.655ENSMALG00000001208RPA18570.655Monopterus_albus
ENSSFOG00015005362rpa19281.198ENSMALG00000011453rpa19981.364Monopterus_albus
ENSSFOG00015005362rpa19263.961MGP_CAROLIEiJ_G0016734Rpa19964.123Mus_caroli
ENSSFOG00015005362rpa19263.124ENSMUSG00000000751Rpa19963.124Mus_musculus
ENSSFOG00015005362rpa19264.078MGP_PahariEiJ_G0017871Rpa19964.239Mus_pahari
ENSSFOG00015005362rpa19263.183MGP_SPRETEiJ_G0017577Rpa19963.183Mus_spretus
ENSSFOG00015005362rpa19264.706ENSMPUG00000013119RPA19964.706Mustela_putorius_furo
ENSSFOG00015005362rpa19262.742ENSMLUG00000006113RPA19962.742Myotis_lucifugus
ENSSFOG00015005362rpa18964.755ENSNGAG00000004522Rpa19564.755Nannospalax_galili
ENSSFOG00015005362rpa18780.702ENSNBRG00000020595rpa19980.702Neolamprologus_brichardi
ENSSFOG00015005362rpa19162.689ENSNBRG00000009672RPA19762.689Neolamprologus_brichardi
ENSSFOG00015005362rpa19265.523ENSNLEG00000017149RPA19965.905Nomascus_leucogenys
ENSSFOG00015005362rpa19055.333ENSMEUG00000006714RPA19955.333Notamacropus_eugenii
ENSSFOG00015005362rpa18863.912ENSODEG00000009038RPA19663.912Octodon_degus
ENSSFOG00015005362rpa19280.619ENSONIG00000013135rpa19980.619Oreochromis_niloticus
ENSSFOG00015005362rpa19065.563ENSOANG00000010880RPA19965.563Ornithorhynchus_anatinus
ENSSFOG00015005362rpa19262.326ENSOCUG00000001504RPA19962.326Oryctolagus_cuniculus
ENSSFOG00015005362rpa19279.833ENSORLG00000004856rpa19979.833Oryzias_latipes
ENSSFOG00015005362rpa19258.321ENSORLG00000003368RPA19958.321Oryzias_latipes
ENSSFOG00015005362rpa19265.895ENSORLG00020015284RPA19865.895Oryzias_latipes_hni
ENSSFOG00015005362rpa19279.833ENSORLG00020008980rpa19979.833Oryzias_latipes_hni
ENSSFOG00015005362rpa19279.833ENSORLG00015013982rpa19979.833Oryzias_latipes_hsok
ENSSFOG00015005362rpa16966.821ENSORLG00015005867-9866.821Oryzias_latipes_hsok
ENSSFOG00015005362rpa19259.409ENSORLG00015020383RPA19959.409Oryzias_latipes_hsok
ENSSFOG00015005362rpa19276.500ENSOMEG00000004704rpa19976.500Oryzias_melastigma
ENSSFOG00015005362rpa19158.278ENSOMEG00000011040RPA110060.069Oryzias_melastigma
ENSSFOG00015005362rpa17077.297ENSOGAG00000029379-9977.297Otolemur_garnettii
ENSSFOG00015005362rpa19264.706ENSOGAG00000005581-9964.706Otolemur_garnettii
ENSSFOG00015005362rpa19264.065ENSOARG00000014479RPA19964.390Ovis_aries
ENSSFOG00015005362rpa19265.686ENSPPAG00000039680RPA19966.069Pan_paniscus
ENSSFOG00015005362rpa19264.437ENSPPRG00000011807RPA19964.437Panthera_pardus
ENSSFOG00015005362rpa19264.437ENSPTIG00000007898RPA19964.437Panthera_tigris_altaica
ENSSFOG00015005362rpa19266.013ENSPTRG00000008539RPA19966.395Pan_troglodytes
ENSSFOG00015005362rpa19264.706ENSPANG00000024592RPA19964.869Papio_anubis
ENSSFOG00015005362rpa19183.362ENSPKIG00000008053rpa19980.757Paramormyrops_kingsleyae
ENSSFOG00015005362rpa18964.696ENSPSIG00000015617RPA19864.696Pelodiscus_sinensis
ENSSFOG00015005362rpa19276.127ENSPMGG00000011589rpa19976.294Periophthalmus_magnuspinnatus
ENSSFOG00015005362rpa19261.275ENSPMGG00000000543RPA19964.591Periophthalmus_magnuspinnatus
ENSSFOG00015005362rpa19265.196ENSPEMG00000021061Rpa19965.196Peromyscus_maniculatus_bairdii
ENSSFOG00015005362rpa19263.089ENSPCIG00000019049RPA19963.415Phascolarctos_cinereus
ENSSFOG00015005362rpa19278.073ENSPFOG00000003987rpa19978.073Poecilia_formosa
ENSSFOG00015005362rpa19278.203ENSPLAG00000004984rpa19978.203Poecilia_latipinna
ENSSFOG00015005362rpa19160.514ENSPLAG00000008844-9760.514Poecilia_latipinna
ENSSFOG00015005362rpa19278.239ENSPMEG00000020602rpa110077.345Poecilia_mexicana
ENSSFOG00015005362rpa19160.645ENSPMEG00000003627-9760.514Poecilia_mexicana
ENSSFOG00015005362rpa18671.719ENSPREG00000010119RPA18971.951Poecilia_reticulata
ENSSFOG00015005362rpa19070.337ENSPREG00000010174rpa19570.213Poecilia_reticulata
ENSSFOG00015005362rpa19265.147ENSPCOG00000001799RPA19965.147Propithecus_coquereli
ENSSFOG00015005362rpa19263.889ENSPVAG00000002149RPA19963.889Pteropus_vampyrus
ENSSFOG00015005362rpa19263.438ENSPNYG00000024165RPA19963.438Pundamilia_nyererei
ENSSFOG00015005362rpa19281.095ENSPNYG00000016316rpa19981.239Pundamilia_nyererei
ENSSFOG00015005362rpa19173.199ENSPNAG00000008599rpa110071.151Pygocentrus_nattereri
ENSSFOG00015005362rpa19072.330ENSRNOG00000003123Rpa19965.359Rattus_norvegicus
ENSSFOG00015005362rpa19264.542ENSRBIG00000036587RPA19964.542Rhinopithecus_bieti
ENSSFOG00015005362rpa19259.967ENSRROG00000043278RPA19959.967Rhinopithecus_roxellana
ENSSFOG00015005362rpa18732.447YAR007CRFA19332.419Saccharomyces_cerevisiae
ENSSFOG00015005362rpa18366.068ENSSBOG00000030233RPA19666.248Saimiri_boliviensis_boliviensis
ENSSFOG00015005362rpa19164.098ENSSHAG00000007969RPA19864.098Sarcophilus_harrisii
ENSSFOG00015005362rpa19272.460ENSSMAG00000019746RPA110059.063Scophthalmus_maximus
ENSSFOG00015005362rpa19280.629ENSSDUG00000011949rpa19980.629Seriola_dumerili
ENSSFOG00015005362rpa19273.441ENSSDUG00000016358RPA19171.711Seriola_dumerili
ENSSFOG00015005362rpa19280.629ENSSLDG00000011806rpa19980.629Seriola_lalandi_dorsalis
ENSSFOG00015005362rpa18673.210ENSSLDG00000020784RPA18771.491Seriola_lalandi_dorsalis
ENSSFOG00015005362rpa18075.758ENSSARG00000007506RPA18975.758Sorex_araneus
ENSSFOG00015005362rpa18962.649ENSSPUG00000007223RPA19862.649Sphenodon_punctatus
ENSSFOG00015005362rpa19166.949ENSSPAG00000011165RPA110065.066Stegastes_partitus
ENSSFOG00015005362rpa19278.642ENSSPAG00000009903rpa19978.642Stegastes_partitus
ENSSFOG00015005362rpa19264.132ENSSSCG00000017822RPA19965.116Sus_scrofa
ENSSFOG00015005362rpa19263.054ENSTGUG00000005775RPA19963.054Taeniopygia_guttata
ENSSFOG00015005362rpa19264.271ENSTRUG00000000405RPA18965.490Takifugu_rubripes
ENSSFOG00015005362rpa19275.748ENSTRUG00000003616rpa19975.748Takifugu_rubripes
ENSSFOG00015005362rpa19277.340ENSTNIG00000016199rpa19977.414Tetraodon_nigroviridis
ENSSFOG00015005362rpa17472.500ENSTBEG00000002709RPA18172.500Tupaia_belangeri
ENSSFOG00015005362rpa19263.740ENSTTRG00000001169RPA19964.065Tursiops_truncatus
ENSSFOG00015005362rpa18478.846ENSUAMG00000015676RPA19778.846Ursus_americanus
ENSSFOG00015005362rpa19265.033ENSUMAG00000009328RPA19965.033Ursus_maritimus
ENSSFOG00015005362rpa19162.932ENSVPAG00000009443RPA19962.932Vicugna_pacos
ENSSFOG00015005362rpa19264.706ENSVVUG00000021715RPA19964.706Vulpes_vulpes
ENSSFOG00015005362rpa19266.833ENSXETG00000013538rpa19967.384Xenopus_tropicalis
ENSSFOG00015005362rpa18863.700ENSXCOG00000009899-9963.700Xiphophorus_couchianus
ENSSFOG00015005362rpa19076.064ENSXCOG00000010068rpa19576.064Xiphophorus_couchianus
ENSSFOG00015005362rpa18771.493ENSXMAG00000010333RPA18671.493Xiphophorus_maculatus
ENSSFOG00015005362rpa19276.578ENSXMAG00000004102rpa110077.620Xiphophorus_maculatus

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