EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005437 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7278 bases
Position: chrKV410836.1:1441501-1448778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008317	APOBEC_N	PF08210.11	5.8e-34	1	2
ENSSFOP00015008317	APOBEC_N	PF08210.11	5.8e-34	2	2
ENSSFOP00015008317	APOBEC_C	PF05240.14	6.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008432	-	594	-	ENSSFOP00015008317	197 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015005437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005437	-	73	66.092	ENSSFOG00015022920	apobec2	63	66.092

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005437	-	71	50.000	ENSG00000124701	APOBEC2	78	50.000	Homo_sapiens
ENSSFOG00015005437	-	71	56.213	ENSAPOG00000019390	apobec2b	62	56.213	Acanthochromis_polyacanthus
ENSSFOG00015005437	-	74	46.667	ENSAMEG00000004467	APOBEC2	71	46.667	Ailuropoda_melanoleuca
ENSSFOG00015005437	-	70	56.886	ENSACIG00000002472	APOBEC2	69	56.886	Amphilophus_citrinellus
ENSSFOG00015005437	-	71	60.234	ENSACIG00000016370	apobec2a	66	60.234	Amphilophus_citrinellus
ENSSFOG00015005437	-	71	58.480	ENSAOCG00000003291	apobec2a	69	58.480	Amphiprion_ocellaris
ENSSFOG00015005437	-	73	56.069	ENSAOCG00000023355	apobec2b	64	56.069	Amphiprion_ocellaris
ENSSFOG00015005437	-	73	56.069	ENSAPEG00000004591	apobec2b	64	56.069	Amphiprion_percula
ENSSFOG00015005437	-	71	57.895	ENSAPEG00000003630	apobec2a	69	57.895	Amphiprion_percula
ENSSFOG00015005437	-	71	55.030	ENSATEG00000023043	APOBEC2	62	55.030	Anabas_testudineus
ENSSFOG00015005437	-	72	58.140	ENSATEG00000000956	apobec2a	96	58.140	Anabas_testudineus
ENSSFOG00015005437	-	71	43.429	ENSAPLG00000002895	APOBEC2	76	48.000	Anas_platyrhynchos
ENSSFOG00015005437	-	76	48.108	ENSACAG00000016506	APOBEC2	96	48.352	Anolis_carolinensis
ENSSFOG00015005437	-	71	50.000	ENSANAG00000026993	APOBEC2	78	50.000	Aotus_nancymaae
ENSSFOG00015005437	-	70	55.090	ENSACLG00000007634	APOBEC2	62	55.090	Astatotilapia_calliptera
ENSSFOG00015005437	-	71	63.291	ENSACLG00000026736	-	94	63.291	Astatotilapia_calliptera
ENSSFOG00015005437	-	73	55.172	ENSAMXG00000015966	apobec2b	62	55.172	Astyanax_mexicanus
ENSSFOG00015005437	-	71	55.429	ENSAMXG00000042992	apobec2a	68	57.143	Astyanax_mexicanus
ENSSFOG00015005437	-	71	47.701	ENSBTAG00000005974	APOBEC2	56	47.701	Bos_taurus
ENSSFOG00015005437	-	71	50.000	ENSCJAG00000004063	APOBEC2	78	50.000	Callithrix_jacchus
ENSSFOG00015005437	-	71	48.276	ENSCAFG00000001575	APOBEC2	78	48.276	Canis_familiaris
ENSSFOG00015005437	-	71	48.276	ENSCAFG00020008306	APOBEC2	78	48.276	Canis_lupus_dingo
ENSSFOG00015005437	-	71	47.701	ENSCHIG00000026348	APOBEC2	78	47.701	Capra_hircus
ENSSFOG00015005437	-	71	49.425	ENSTSYG00000008206	APOBEC2	77	49.425	Carlito_syrichta
ENSSFOG00015005437	-	71	48.851	ENSCAPG00000015084	APOBEC2	76	48.851	Cavia_aperea
ENSSFOG00015005437	-	71	48.851	ENSCPOG00000036103	APOBEC2	76	48.851	Cavia_porcellus
ENSSFOG00015005437	-	71	50.000	ENSCCAG00000033987	APOBEC2	78	50.000	Cebus_capucinus
ENSSFOG00015005437	-	71	50.000	ENSCATG00000010691	APOBEC2	78	50.000	Cercocebus_atys
ENSSFOG00015005437	-	71	49.425	ENSCLAG00000013817	APOBEC2	76	49.425	Chinchilla_lanigera
ENSSFOG00015005437	-	71	50.000	ENSCSAG00000011177	APOBEC2	78	50.000	Chlorocebus_sabaeus
ENSSFOG00015005437	-	71	50.575	ENSCHOG00000008930	APOBEC2	97	50.575	Choloepus_hoffmanni
ENSSFOG00015005437	-	68	46.429	ENSCPBG00000017469	APOBEC2	81	47.222	Chrysemys_picta_bellii
ENSSFOG00015005437	-	71	50.000	ENSCANG00000035072	APOBEC2	78	50.000	Colobus_angolensis_palliatus
ENSSFOG00015005437	-	71	50.000	ENSCGRG00001014983	Apobec2	78	50.000	Cricetulus_griseus_chok1gshd
ENSSFOG00015005437	-	71	50.000	ENSCGRG00000007835	Apobec2	78	50.000	Cricetulus_griseus_crigri
ENSSFOG00015005437	-	71	60.234	ENSCSEG00000020201	apobec2a	67	60.234	Cynoglossus_semilaevis
ENSSFOG00015005437	-	71	52.663	ENSCSEG00000000690	-	63	52.663	Cynoglossus_semilaevis
ENSSFOG00015005437	-	71	55.621	ENSCVAG00000012342	apobec2b	63	55.621	Cyprinodon_variegatus
ENSSFOG00015005437	-	71	58.480	ENSDARG00000018881	apobec2a	63	58.480	Danio_rerio
ENSSFOG00015005437	-	73	55.747	ENSDARG00000113992	apobec2b	64	55.747	Danio_rerio
ENSSFOG00015005437	-	71	50.000	ENSDORG00000006447	Apobec2	76	50.000	Dipodomys_ordii
ENSSFOG00015005437	-	71	47.126	ENSETEG00000000624	APOBEC2	76	47.126	Echinops_telfairi
ENSSFOG00015005437	-	59	47.973	ENSEASG00005002937	APOBEC2	77	47.973	Equus_asinus_asinus
ENSSFOG00015005437	-	71	49.425	ENSECAG00000006576	APOBEC2	78	49.425	Equus_caballus
ENSSFOG00015005437	-	73	48.876	ENSEEUG00000006046	APOBEC2	79	48.876	Erinaceus_europaeus
ENSSFOG00015005437	-	71	60.234	ENSELUG00000003736	apobec2a	60	60.234	Esox_lucius
ENSSFOG00015005437	-	71	47.701	ENSFCAG00000004108	APOBEC2	78	47.701	Felis_catus
ENSSFOG00015005437	-	74	52.980	ENSFALG00000003910	APOBEC2	78	52.980	Ficedula_albicollis
ENSSFOG00015005437	-	71	48.851	ENSFDAG00000006015	APOBEC2	77	48.851	Fukomys_damarensis
ENSSFOG00015005437	-	71	55.621	ENSFHEG00000005492	apobec2b	71	55.621	Fundulus_heteroclitus
ENSSFOG00015005437	-	71	54.971	ENSGMOG00000007028	apobec2a	97	54.971	Gadus_morhua
ENSSFOG00015005437	-	71	53.529	ENSGMOG00000006819	apobec2b	69	53.529	Gadus_morhua
ENSSFOG00015005437	-	71	48.571	ENSGALG00000003226	APOBEC2	78	48.571	Gallus_gallus
ENSSFOG00015005437	-	71	55.621	ENSGAFG00000007634	apobec2b	55	55.621	Gambusia_affinis
ENSSFOG00015005437	-	71	59.064	ENSGACG00000011671	apobec2a	90	59.064	Gasterosteus_aculeatus
ENSSFOG00015005437	-	71	54.438	ENSGACG00000009663	apobec2b	75	54.438	Gasterosteus_aculeatus
ENSSFOG00015005437	-	68	45.833	ENSGAGG00000010347	APOBEC2	81	46.667	Gopherus_agassizii
ENSSFOG00015005437	-	71	50.000	ENSGGOG00000001099	APOBEC2	76	50.000	Gorilla_gorilla
ENSSFOG00015005437	-	71	55.030	ENSHBUG00000005993	apobec2b	62	55.030	Haplochromis_burtoni
ENSSFOG00015005437	-	71	59.064	ENSHBUG00000015890	apobec2a	68	59.064	Haplochromis_burtoni
ENSSFOG00015005437	-	71	47.701	ENSHGLG00000017169	APOBEC2	76	49.153	Heterocephalus_glaber_female
ENSSFOG00015005437	-	71	47.701	ENSHGLG00100019442	APOBEC2	76	49.153	Heterocephalus_glaber_male
ENSSFOG00015005437	-	71	58.480	ENSHCOG00000020319	apobec2a	69	58.480	Hippocampus_comes
ENSSFOG00015005437	-	71	54.971	ENSHCOG00000002712	APOBEC2	64	54.971	Hippocampus_comes
ENSSFOG00015005437	-	75	58.427	ENSIPUG00000013784	Apobec2	66	58.427	Ictalurus_punctatus
ENSSFOG00015005437	-	71	50.000	ENSSTOG00000023643	APOBEC2	78	50.000	Ictidomys_tridecemlineatus
ENSSFOG00015005437	-	71	48.851	ENSJJAG00000009733	Apobec2	78	48.851	Jaculus_jaculus
ENSSFOG00015005437	-	71	55.621	ENSKMAG00000020631	apobec2b	63	55.621	Kryptolebias_marmoratus
ENSSFOG00015005437	-	71	57.310	ENSLBEG00000025214	apobec2a	70	57.310	Labrus_bergylta
ENSSFOG00015005437	-	73	53.757	ENSLBEG00000009422	-	60	55.030	Labrus_bergylta
ENSSFOG00015005437	-	71	52.047	ENSLACG00000015985	APOBEC2	73	52.047	Latimeria_chalumnae
ENSSFOG00015005437	-	74	57.062	ENSLOCG00000012415	apobec2b	63	57.062	Lepisosteus_oculatus
ENSSFOG00015005437	-	71	50.000	ENSLAFG00000016563	APOBEC2	78	50.000	Loxodonta_africana
ENSSFOG00015005437	-	71	50.000	ENSMFAG00000044645	APOBEC2	78	50.000	Macaca_fascicularis
ENSSFOG00015005437	-	71	50.000	ENSMMUG00000021171	APOBEC2	78	50.000	Macaca_mulatta
ENSSFOG00015005437	-	71	50.000	ENSMNEG00000045497	APOBEC2	78	50.000	Macaca_nemestrina
ENSSFOG00015005437	-	71	50.000	ENSMLEG00000028328	APOBEC2	78	50.000	Mandrillus_leucophaeus
ENSSFOG00015005437	-	73	56.897	ENSMAMG00000023685	apobec2a	68	56.897	Mastacembelus_armatus
ENSSFOG00015005437	-	71	55.621	ENSMAMG00000007926	APOBEC2	61	55.621	Mastacembelus_armatus
ENSSFOG00015005437	-	72	58.721	ENSMZEG00005005240	-	88	58.721	Maylandia_zebra
ENSSFOG00015005437	-	71	54.438	ENSMZEG00005027159	APOBEC2	62	54.438	Maylandia_zebra
ENSSFOG00015005437	-	71	48.571	ENSMGAG00000010173	APOBEC2	91	48.571	Meleagris_gallopavo
ENSSFOG00015005437	-	71	50.000	ENSMAUG00000011016	Apobec2	78	50.000	Mesocricetus_auratus
ENSSFOG00015005437	-	71	50.000	ENSMICG00000043339	APOBEC2	78	50.000	Microcebus_murinus
ENSSFOG00015005437	-	71	50.000	ENSMOCG00000001904	Apobec2	78	50.000	Microtus_ochrogaster
ENSSFOG00015005437	-	70	53.293	ENSMMOG00000008681	apobec2b	63	53.293	Mola_mola
ENSSFOG00015005437	-	74	46.667	ENSMODG00000013090	APOBEC2	81	46.667	Monodelphis_domestica
ENSSFOG00015005437	-	71	53.846	ENSMALG00000013779	APOBEC2	65	53.846	Monopterus_albus
ENSSFOG00015005437	-	71	58.480	ENSMALG00000020523	apobec2a	69	58.480	Monopterus_albus
ENSSFOG00015005437	-	71	49.711	MGP_CAROLIEiJ_G0021727	Apobec2	77	49.711	Mus_caroli
ENSSFOG00015005437	-	71	49.711	ENSMUSG00000040694	Apobec2	77	49.711	Mus_musculus
ENSSFOG00015005437	-	71	49.711	MGP_PahariEiJ_G0020716	Apobec2	77	49.711	Mus_pahari
ENSSFOG00015005437	-	71	46.552	ENSMPUG00000013691	APOBEC2	75	46.552	Mustela_putorius_furo
ENSSFOG00015005437	-	71	47.701	ENSMLUG00000011327	APOBEC2	76	47.701	Myotis_lucifugus
ENSSFOG00015005437	-	71	49.425	ENSNGAG00000013717	Apobec2	78	49.425	Nannospalax_galili
ENSSFOG00015005437	-	71	58.824	ENSNBRG00000021776	apobec2a	68	58.824	Neolamprologus_brichardi
ENSSFOG00015005437	-	71	54.438	ENSNBRG00000018806	apobec2b	56	54.438	Neolamprologus_brichardi
ENSSFOG00015005437	-	71	50.000	ENSNLEG00000005057	APOBEC2	78	50.000	Nomascus_leucogenys
ENSSFOG00015005437	-	74	46.667	ENSMEUG00000011623	APOBEC2	81	46.667	Notamacropus_eugenii
ENSSFOG00015005437	-	71	49.425	ENSOPRG00000014808	APOBEC2	76	49.425	Ochotona_princeps
ENSSFOG00015005437	-	71	48.851	ENSODEG00000016183	APOBEC2	76	48.851	Octodon_degus
ENSSFOG00015005437	-	71	55.030	ENSONIG00000012289	apobec2b	62	55.030	Oreochromis_niloticus
ENSSFOG00015005437	-	71	60.234	ENSONIG00000004644	-	68	60.234	Oreochromis_niloticus
ENSSFOG00015005437	-	70	50.877	ENSOANG00000000824	APOBEC2	94	50.877	Ornithorhynchus_anatinus
ENSSFOG00015005437	-	71	49.425	ENSOCUG00000028008	APOBEC2	77	49.425	Oryctolagus_cuniculus
ENSSFOG00015005437	-	74	57.062	ENSORLG00000010752	apobec2a	74	57.062	Oryzias_latipes
ENSSFOG00015005437	-	71	55.621	ENSORLG00000022372	APOBEC2	63	55.621	Oryzias_latipes
ENSSFOG00015005437	-	71	56.213	ENSORLG00020006164	APOBEC2	63	56.213	Oryzias_latipes_hni
ENSSFOG00015005437	-	74	57.062	ENSORLG00020004153	apobec2a	74	57.062	Oryzias_latipes_hni
ENSSFOG00015005437	-	71	56.213	ENSORLG00015022089	-	63	56.213	Oryzias_latipes_hsok
ENSSFOG00015005437	-	74	57.062	ENSORLG00015021781	apobec2a	74	57.062	Oryzias_latipes_hsok
ENSSFOG00015005437	-	71	57.988	ENSOMEG00000015449	APOBEC2	69	57.988	Oryzias_melastigma
ENSSFOG00015005437	-	74	54.802	ENSOMEG00000001311	apobec2a	73	54.802	Oryzias_melastigma
ENSSFOG00015005437	-	71	50.000	ENSOGAG00000002632	APOBEC2	78	50.000	Otolemur_garnettii
ENSSFOG00015005437	-	71	47.701	ENSOARG00000000820	APOBEC2	78	47.701	Ovis_aries
ENSSFOG00015005437	-	71	50.000	ENSPPAG00000035598	APOBEC2	76	50.000	Pan_paniscus
ENSSFOG00015005437	-	71	47.701	ENSPPRG00000008530	APOBEC2	78	47.701	Panthera_pardus
ENSSFOG00015005437	-	71	47.701	ENSPTIG00000011084	APOBEC2	78	47.701	Panthera_tigris_altaica
ENSSFOG00015005437	-	71	50.000	ENSPTRG00000029679	APOBEC2	76	50.000	Pan_troglodytes
ENSSFOG00015005437	-	71	50.000	ENSPANG00000007121	APOBEC2	78	50.000	Papio_anubis
ENSSFOG00015005437	-	71	64.912	ENSPKIG00000005395	apobec2a	69	64.912	Paramormyrops_kingsleyae
ENSSFOG00015005437	-	73	62.644	ENSPKIG00000004741	apobec2b	62	62.644	Paramormyrops_kingsleyae
ENSSFOG00015005437	-	68	47.619	ENSPSIG00000013480	APOBEC2	78	48.333	Pelodiscus_sinensis
ENSSFOG00015005437	-	71	58.480	ENSPMGG00000004044	apobec2a	68	58.480	Periophthalmus_magnuspinnatus
ENSSFOG00015005437	-	71	53.254	ENSPMGG00000002686	APOBEC2	50	53.254	Periophthalmus_magnuspinnatus
ENSSFOG00015005437	-	71	50.000	ENSPEMG00000005724	Apobec2	78	50.000	Peromyscus_maniculatus_bairdii
ENSSFOG00015005437	-	71	56.213	ENSPFOG00000001216	apobec2b	63	56.213	Poecilia_formosa
ENSSFOG00015005437	-	71	55.621	ENSPLAG00000002074	apobec2b	69	55.621	Poecilia_latipinna
ENSSFOG00015005437	-	71	56.213	ENSPMEG00000017537	apobec2b	63	56.213	Poecilia_mexicana
ENSSFOG00015005437	-	71	56.805	ENSPREG00000020060	apobec2b	55	56.805	Poecilia_reticulata
ENSSFOG00015005437	-	71	49.425	ENSPPYG00000016586	APOBEC2	78	49.425	Pongo_abelii
ENSSFOG00015005437	-	71	48.851	ENSPCAG00000011433	APOBEC2	91	48.851	Procavia_capensis
ENSSFOG00015005437	-	71	50.575	ENSPCOG00000026935	APOBEC2	78	50.575	Propithecus_coquereli
ENSSFOG00015005437	-	71	47.126	ENSPVAG00000008316	APOBEC2	78	47.126	Pteropus_vampyrus
ENSSFOG00015005437	-	71	54.438	ENSPNYG00000016747	apobec2b	62	54.438	Pundamilia_nyererei
ENSSFOG00015005437	-	75	56.180	ENSPNAG00000013666	apobec2b	63	57.471	Pygocentrus_nattereri
ENSSFOG00015005437	-	73	59.195	ENSPNAG00000010382	apobec2a	65	59.195	Pygocentrus_nattereri
ENSSFOG00015005437	-	71	49.711	ENSRNOG00000012303	Apobec2	77	49.711	Rattus_norvegicus
ENSSFOG00015005437	-	71	50.000	ENSRBIG00000044756	APOBEC2	78	50.000	Rhinopithecus_bieti
ENSSFOG00015005437	-	71	50.000	ENSRROG00000030082	APOBEC2	78	50.000	Rhinopithecus_roxellana
ENSSFOG00015005437	-	71	50.000	ENSSBOG00000028496	APOBEC2	78	50.000	Saimiri_boliviensis_boliviensis
ENSSFOG00015005437	-	74	46.111	ENSSHAG00000017771	APOBEC2	81	46.111	Sarcophilus_harrisii
ENSSFOG00015005437	-	71	59.064	ENSSMAG00000001011	apobec2a	50	59.064	Scophthalmus_maximus
ENSSFOG00015005437	-	71	55.621	ENSSMAG00000005110	APOBEC2	61	55.621	Scophthalmus_maximus
ENSSFOG00015005437	-	71	57.396	ENSSDUG00000014543	apobec2b	62	57.396	Seriola_dumerili
ENSSFOG00015005437	-	71	58.480	ENSSDUG00000007013	apobec2a	67	58.480	Seriola_dumerili
ENSSFOG00015005437	-	71	57.396	ENSSLDG00000003321	apobec2b	62	57.396	Seriola_lalandi_dorsalis
ENSSFOG00015005437	-	71	59.064	ENSSLDG00000020199	apobec2a	67	59.064	Seriola_lalandi_dorsalis
ENSSFOG00015005437	-	79	44.845	ENSSPUG00000010839	APOBEC2	92	45.361	Sphenodon_punctatus
ENSSFOG00015005437	-	71	59.064	ENSSPAG00000016299	-	69	59.064	Stegastes_partitus
ENSSFOG00015005437	-	71	55.621	ENSSPAG00000005253	apobec2b	62	55.621	Stegastes_partitus
ENSSFOG00015005437	-	77	47.849	ENSSSCG00000036018	APOBEC2	86	47.849	Sus_scrofa
ENSSFOG00015005437	-	71	45.143	ENSTGUG00000018533	APOBEC2	78	48.571	Taeniopygia_guttata
ENSSFOG00015005437	-	71	57.310	ENSTRUG00000009123	apobec2a	68	57.310	Takifugu_rubripes
ENSSFOG00015005437	-	71	50.000	ENSTRUG00000012839	apobec2b	63	50.000	Takifugu_rubripes
ENSSFOG00015005437	-	71	50.595	ENSTNIG00000015038	apobec2b	63	50.595	Tetraodon_nigroviridis
ENSSFOG00015005437	-	71	48.851	ENSTBEG00000003553	APOBEC2	78	48.851	Tupaia_belangeri
ENSSFOG00015005437	-	71	46.552	ENSTTRG00000013392	APOBEC2	77	46.552	Tursiops_truncatus
ENSSFOG00015005437	-	71	47.701	ENSUAMG00000027667	APOBEC2	76	47.701	Ursus_americanus
ENSSFOG00015005437	-	71	48.276	ENSVVUG00000026617	APOBEC2	78	48.276	Vulpes_vulpes
ENSSFOG00015005437	-	71	41.848	ENSXETG00000008007	apobec2	77	41.848	Xenopus_tropicalis
ENSSFOG00015005437	-	71	54.438	ENSXCOG00000007398	apobec2b	66	54.438	Xiphophorus_couchianus
ENSSFOG00015005437	-	71	54.438	ENSXMAG00000008134	apobec2b	62	54.438	Xiphophorus_maculatus