EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005448 (Gene tree)
Gene ID: 108930878
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108930878
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 4037 bases
Position: chrKV410939.1:1234560-1238596
Accession: 108930878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008318	Endonuclease_NS	PF01223.23	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008435	-	2621	XM_018746359	ENSSFOP00015008318	595 (aa)	XP_018601875	A0A1W4ZM81

Gene Model

Click here to download ENSSFOG00015005448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005448	-	50	42.949	ENSSFOG00015005427	-	86	41.987

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005448	-	54	31.627	ENSAPEG00000013928	-	99	31.627	Amphiprion_percula
ENSSFOG00015005448	-	50	30.195	ENSACLG00000018957	si:dkey-85k7.11	97	30.195	Astatotilapia_calliptera
ENSSFOG00015005448	-	51	31.111	ENSAMXG00000037172	-	96	30.030	Astyanax_mexicanus
ENSSFOG00015005448	-	50	39.610	ENSCPBG00000007740	-	65	38.636	Chrysemys_picta_bellii
ENSSFOG00015005448	-	91	34.103	ENSCPBG00000009952	-	98	33.925	Chrysemys_picta_bellii
ENSSFOG00015005448	-	99	37.363	ENSCPBG00000005639	-	98	37.363	Chrysemys_picta_bellii
ENSSFOG00015005448	-	99	39.617	ENSDARG00000077239	si:ch211-165i18.2	99	39.870	Danio_rerio
ENSSFOG00015005448	-	99	38.462	ENSGAGG00000016563	-	99	38.462	Gopherus_agassizii
ENSSFOG00015005448	-	51	32.063	ENSKMAG00000019478	-	95	31.429	Kryptolebias_marmoratus
ENSSFOG00015005448	-	70	36.406	ENSLOCG00000001272	-	96	36.406	Lepisosteus_oculatus
ENSSFOG00015005448	-	50	30.195	ENSMZEG00005005087	si:dkey-85k7.11	87	30.195	Maylandia_zebra
ENSSFOG00015005448	-	90	33.514	ENSMZEG00005024062	si:ch211-165i18.2	99	33.514	Maylandia_zebra
ENSSFOG00015005448	-	50	30.820	ENSMODG00000000165	ENDOD1	56	30.820	Monodelphis_domestica
ENSSFOG00015005448	-	51	30.159	ENSORLG00000003618	si:dkey-85k7.11	71	33.613	Oryzias_latipes
ENSSFOG00015005448	-	91	38.530	ENSORLG00000003245	si:ch211-165i18.2	99	38.530	Oryzias_latipes
ENSSFOG00015005448	-	91	37.993	ENSORLG00020006296	-	99	37.993	Oryzias_latipes_hni
ENSSFOG00015005448	-	91	38.420	ENSORLG00020006331	-	99	38.420	Oryzias_latipes_hni
ENSSFOG00015005448	-	91	38.600	ENSORLG00015009196	si:ch211-165i18.2	99	38.600	Oryzias_latipes_hsok
ENSSFOG00015005448	-	91	36.299	ENSOMEG00000012820	-	99	36.299	Oryzias_melastigma
ENSSFOG00015005448	-	50	30.519	ENSOMEG00000003778	si:dkey-85k7.10	72	34.034	Oryzias_melastigma
ENSSFOG00015005448	-	99	34.506	ENSOMEG00000007309	-	99	34.506	Oryzias_melastigma
ENSSFOG00015005448	-	72	35.550	ENSOMEG00000007367	-	96	35.550	Oryzias_melastigma
ENSSFOG00015005448	-	99	40.698	ENSPKIG00000007324	-	99	40.698	Paramormyrops_kingsleyae
ENSSFOG00015005448	-	53	32.827	ENSPKIG00000020380	-	73	36.134	Paramormyrops_kingsleyae
ENSSFOG00015005448	-	99	40.033	ENSPKIG00000019032	-	99	40.033	Paramormyrops_kingsleyae
ENSSFOG00015005448	-	99	39.833	ENSPKIG00000003602	-	99	39.833	Paramormyrops_kingsleyae
ENSSFOG00015005448	-	91	36.796	ENSPNYG00000003385	si:ch211-165i18.2	99	36.796	Pundamilia_nyererei
ENSSFOG00015005448	-	51	30.794	ENSPNAG00000014220	-	95	30.149	Pygocentrus_nattereri
ENSSFOG00015005448	-	90	39.330	ENSPNAG00000010161	si:ch211-165i18.2	99	39.168	Pygocentrus_nattereri
ENSSFOG00015005448	-	55	32.059	ENSSDUG00000005584	-	96	32.353	Seriola_dumerili
ENSSFOG00015005448	-	55	32.047	ENSSLDG00000021474	-	96	32.344	Seriola_lalandi_dorsalis
ENSSFOG00015005448	-	50	31.090	ENSSPAG00000000592	-	100	30.769	Stegastes_partitus