EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015005455 (Gene tree)
Gene ID: 108932038
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 11383 bases
Position: chrKV410985.1:856248-867630
Accession: 108932038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008327	AARP2CN	PF08142.12	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008444	-	4980	XM_018748186	ENSSFOP00015008327	813 (aa)	XP_018603702	A0A1W4ZJ06

Gene Model

Click here to download ENSSFOG00015005455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005455's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005455	tsr1	98	56.382	ENSG00000167721	TSR1	98	56.506	Homo_sapiens
ENSSFOG00015005455	tsr1	100	74.970	ENSAPOG00000020891	tsr1	100	75.569	Acanthochromis_polyacanthus
ENSSFOG00015005455	tsr1	99	55.298	ENSAMEG00000007599	TSR1	99	55.447	Ailuropoda_melanoleuca
ENSSFOG00015005455	tsr1	100	74.636	ENSACIG00000007090	tsr1	100	74.029	Amphilophus_citrinellus
ENSSFOG00015005455	tsr1	100	75.451	ENSAOCG00000023284	tsr1	100	75.692	Amphiprion_ocellaris
ENSSFOG00015005455	tsr1	93	74.515	ENSAPEG00000008452	tsr1	99	74.774	Amphiprion_percula
ENSSFOG00015005455	tsr1	100	75.149	ENSATEG00000021961	tsr1	100	74.791	Anabas_testudineus
ENSSFOG00015005455	tsr1	90	58.356	ENSAPLG00000013422	TSR1	99	58.523	Anas_platyrhynchos
ENSSFOG00015005455	tsr1	70	48.464	ENSACAG00000000859	TSR1	92	48.826	Anolis_carolinensis
ENSSFOG00015005455	tsr1	98	57.054	ENSANAG00000031071	TSR1	98	56.382	Aotus_nancymaae
ENSSFOG00015005455	tsr1	100	75.303	ENSACLG00000007595	tsr1	99	76.029	Astatotilapia_calliptera
ENSSFOG00015005455	tsr1	52	70.670	ENSAMXG00000008470	tsr1	94	71.041	Astyanax_mexicanus
ENSSFOG00015005455	tsr1	99	56.495	ENSBTAG00000004225	TSR1	99	57.038	Bos_taurus
ENSSFOG00015005455	tsr1	96	40.327	WBGene00006497	tag-151	96	40.402	Caenorhabditis_elegans
ENSSFOG00015005455	tsr1	97	55.955	ENSCJAG00000012456	TSR1	98	55.528	Callithrix_jacchus
ENSSFOG00015005455	tsr1	89	54.043	ENSCAFG00000019273	-	100	58.209	Canis_familiaris
ENSSFOG00015005455	tsr1	99	56.341	ENSCAFG00000002106	-	99	55.922	Canis_familiaris
ENSSFOG00015005455	tsr1	99	56.341	ENSCAFG00020009728	TSR1	99	55.922	Canis_lupus_dingo
ENSSFOG00015005455	tsr1	99	56.916	ENSCHIG00000023935	TSR1	99	57.457	Capra_hircus
ENSSFOG00015005455	tsr1	99	56.357	ENSTSYG00000005468	TSR1	99	56.479	Carlito_syrichta
ENSSFOG00015005455	tsr1	92	55.541	ENSCPOG00000014833	TSR1	99	55.863	Cavia_porcellus
ENSSFOG00015005455	tsr1	92	54.796	ENSCCAG00000028962	TSR1	98	54.342	Cebus_capucinus
ENSSFOG00015005455	tsr1	98	56.543	ENSCATG00000044262	TSR1	99	56.613	Cercocebus_atys
ENSSFOG00015005455	tsr1	99	57.528	ENSCLAG00000005567	TSR1	99	57.038	Chinchilla_lanigera
ENSSFOG00015005455	tsr1	98	56.667	ENSCSAG00000013788	TSR1	99	56.737	Chlorocebus_sabaeus
ENSSFOG00015005455	tsr1	98	57.337	ENSCPBG00000020363	TSR1	98	57.108	Chrysemys_picta_bellii
ENSSFOG00015005455	tsr1	96	46.211	ENSCING00000020658	-	99	46.486	Ciona_intestinalis
ENSSFOG00015005455	tsr1	96	46.366	ENSCSAVG00000001875	-	100	45.828	Ciona_savignyi
ENSSFOG00015005455	tsr1	98	53.818	ENSCANG00000033056	TSR1	99	50.743	Colobus_angolensis_palliatus
ENSSFOG00015005455	tsr1	99	55.569	ENSCGRG00001023942	Tsr1	99	55.692	Cricetulus_griseus_chok1gshd
ENSSFOG00015005455	tsr1	99	51.673	ENSCGRG00000013015	Tsr1	99	52.948	Cricetulus_griseus_crigri
ENSSFOG00015005455	tsr1	100	71.084	ENSCSEG00000013009	tsr1	100	71.084	Cynoglossus_semilaevis
ENSSFOG00015005455	tsr1	99	73.091	ENSCVAG00000000506	tsr1	99	73.091	Cyprinodon_variegatus
ENSSFOG00015005455	tsr1	100	74.636	ENSDARG00000007744	tsr1	100	74.758	Danio_rerio
ENSSFOG00015005455	tsr1	99	57.528	ENSDNOG00000004715	TSR1	99	59.078	Dasypus_novemcinctus
ENSSFOG00015005455	tsr1	96	50.506	ENSDORG00000023234	-	99	49.618	Dipodomys_ordii
ENSSFOG00015005455	tsr1	99	56.744	ENSDORG00000016371	-	99	56.463	Dipodomys_ordii
ENSSFOG00015005455	tsr1	96	42.963	FBgn0037073	Tsr1	96	43.571	Drosophila_melanogaster
ENSSFOG00015005455	tsr1	87	69.508	ENSETEG00000017534	TSR1	92	69.508	Echinops_telfairi
ENSSFOG00015005455	tsr1	94	52.124	ENSEBUG00000013731	TSR1	98	51.207	Eptatretus_burgeri
ENSSFOG00015005455	tsr1	99	56.121	ENSEASG00005009302	TSR1	98	56.558	Equus_asinus_asinus
ENSSFOG00015005455	tsr1	99	56.319	ENSECAG00000009114	TSR1	99	56.760	Equus_caballus
ENSSFOG00015005455	tsr1	100	72.837	ENSELUG00000020984	tsr1	96	72.837	Esox_lucius
ENSSFOG00015005455	tsr1	99	56.288	ENSFCAG00000006313	TSR1	99	56.235	Felis_catus
ENSSFOG00015005455	tsr1	100	57.990	ENSFALG00000006532	TSR1	99	58.575	Ficedula_albicollis
ENSSFOG00015005455	tsr1	99	56.740	ENSFDAG00000006038	TSR1	99	56.618	Fukomys_damarensis
ENSSFOG00015005455	tsr1	100	71.789	ENSFHEG00000003626	tsr1	99	71.377	Fundulus_heteroclitus
ENSSFOG00015005455	tsr1	100	70.652	ENSGMOG00000010336	tsr1	100	70.652	Gadus_morhua
ENSSFOG00015005455	tsr1	100	72.115	ENSGAFG00000012993	tsr1	99	72.629	Gambusia_affinis
ENSSFOG00015005455	tsr1	100	72.727	ENSGACG00000010843	tsr1	100	72.804	Gasterosteus_aculeatus
ENSSFOG00015005455	tsr1	98	56.967	ENSGAGG00000025619	-	99	57.457	Gopherus_agassizii
ENSSFOG00015005455	tsr1	98	56.629	ENSGGOG00000001704	TSR1	98	56.629	Gorilla_gorilla
ENSSFOG00015005455	tsr1	100	75.271	ENSHBUG00000017904	tsr1	99	75.875	Haplochromis_burtoni
ENSSFOG00015005455	tsr1	99	57.160	ENSHGLG00000012806	-	99	57.528	Heterocephalus_glaber_female
ENSSFOG00015005455	tsr1	96	50.818	ENSHGLG00000015688	-	98	50.314	Heterocephalus_glaber_female
ENSSFOG00015005455	tsr1	99	57.160	ENSHGLG00100015392	TSR1	99	57.528	Heterocephalus_glaber_male
ENSSFOG00015005455	tsr1	100	73.569	ENSHCOG00000001432	tsr1	100	73.058	Hippocampus_comes
ENSSFOG00015005455	tsr1	100	72.249	ENSIPUG00000004618	tsr1	100	72.249	Ictalurus_punctatus
ENSSFOG00015005455	tsr1	99	56.601	ENSSTOG00000011819	TSR1	99	56.846	Ictidomys_tridecemlineatus
ENSSFOG00015005455	tsr1	90	55.733	ENSJJAG00000019505	Tsr1	95	55.214	Jaculus_jaculus
ENSSFOG00015005455	tsr1	100	73.133	ENSKMAG00000005763	tsr1	99	73.678	Kryptolebias_marmoratus
ENSSFOG00015005455	tsr1	100	74.012	ENSLBEG00000021823	tsr1	99	73.892	Labrus_bergylta
ENSSFOG00015005455	tsr1	100	58.675	ENSLACG00000002197	TSR1	100	58.463	Latimeria_chalumnae
ENSSFOG00015005455	tsr1	100	59.058	ENSLOCG00000006491	TSR1	99	59.030	Lepisosteus_oculatus
ENSSFOG00015005455	tsr1	98	56.790	ENSMFAG00000021330	TSR1	99	56.860	Macaca_fascicularis
ENSSFOG00015005455	tsr1	98	55.966	ENSMMUG00000017519	TSR1	99	56.737	Macaca_mulatta
ENSSFOG00015005455	tsr1	98	56.737	ENSMNEG00000031382	TSR1	99	56.807	Macaca_nemestrina
ENSSFOG00015005455	tsr1	98	56.420	ENSMLEG00000036733	TSR1	99	56.489	Mandrillus_leucophaeus
ENSSFOG00015005455	tsr1	100	73.872	ENSMAMG00000017918	tsr1	99	74.970	Mastacembelus_armatus
ENSSFOG00015005455	tsr1	100	74.760	ENSMZEG00005007477	tsr1	100	75.181	Maylandia_zebra
ENSSFOG00015005455	tsr1	100	56.901	ENSMGAG00000005576	TSR1	100	57.729	Meleagris_gallopavo
ENSSFOG00015005455	tsr1	99	57.301	ENSMICG00000012943	TSR1	99	57.301	Microcebus_murinus
ENSSFOG00015005455	tsr1	99	55.623	ENSMOCG00000022764	Tsr1	99	55.501	Microtus_ochrogaster
ENSSFOG00015005455	tsr1	100	74.760	ENSMMOG00000014280	tsr1	100	74.365	Mola_mola
ENSSFOG00015005455	tsr1	99	57.335	ENSMODG00000010658	TSR1	99	57.213	Monodelphis_domestica
ENSSFOG00015005455	tsr1	100	74.101	ENSMALG00000011681	tsr1	100	73.741	Monopterus_albus
ENSSFOG00015005455	tsr1	99	55.800	MGP_CAROLIEiJ_G0016727	Tsr1	99	55.447	Mus_caroli
ENSSFOG00015005455	tsr1	99	56.098	ENSMUSG00000038335	Tsr1	99	55.746	Mus_musculus
ENSSFOG00015005455	tsr1	99	56.098	MGP_PahariEiJ_G0017864	Tsr1	99	55.746	Mus_pahari
ENSSFOG00015005455	tsr1	99	56.098	MGP_SPRETEiJ_G0017570	Tsr1	99	55.746	Mus_spretus
ENSSFOG00015005455	tsr1	81	59.254	ENSMPUG00000013000	TSR1	100	59.342	Mustela_putorius_furo
ENSSFOG00015005455	tsr1	98	56.576	ENSMLUG00000003505	TSR1	99	57.001	Myotis_lucifugus
ENSSFOG00015005455	tsr1	100	75.300	ENSNBRG00000020728	tsr1	99	75.721	Neolamprologus_brichardi
ENSSFOG00015005455	tsr1	98	51.819	ENSNLEG00000017184	TSR1	98	53.234	Nomascus_leucogenys
ENSSFOG00015005455	tsr1	99	52.747	ENSMEUG00000015828	TSR1	99	53.171	Notamacropus_eugenii
ENSSFOG00015005455	tsr1	100	74.970	ENSONIG00000013131	tsr1	100	75.633	Oreochromis_niloticus
ENSSFOG00015005455	tsr1	95	54.614	ENSOANG00000008637	TSR1	100	54.488	Ornithorhynchus_anatinus
ENSSFOG00015005455	tsr1	98	56.984	ENSOCUG00000014256	TSR1	98	57.407	Oryctolagus_cuniculus
ENSSFOG00015005455	tsr1	100	73.526	ENSORLG00000004926	tsr1	99	73.767	Oryzias_latipes
ENSSFOG00015005455	tsr1	100	73.646	ENSORLG00020008792	tsr1	99	73.887	Oryzias_latipes_hni
ENSSFOG00015005455	tsr1	100	73.646	ENSORLG00015013838	tsr1	99	73.887	Oryzias_latipes_hsok
ENSSFOG00015005455	tsr1	100	73.735	ENSOMEG00000004830	tsr1	99	73.735	Oryzias_melastigma
ENSSFOG00015005455	tsr1	99	57.005	ENSOGAG00000004492	TSR1	99	56.884	Otolemur_garnettii
ENSSFOG00015005455	tsr1	99	57.038	ENSOARG00000015437	TSR1	97	57.579	Ovis_aries
ENSSFOG00015005455	tsr1	98	56.382	ENSPPAG00000036355	TSR1	98	56.506	Pan_paniscus
ENSSFOG00015005455	tsr1	99	55.922	ENSPPRG00000015519	-	99	55.664	Panthera_pardus
ENSSFOG00015005455	tsr1	99	56.044	ENSPTIG00000010608	TSR1	99	55.786	Panthera_tigris_altaica
ENSSFOG00015005455	tsr1	98	56.382	ENSPTRG00000008547	TSR1	98	56.506	Pan_troglodytes
ENSSFOG00015005455	tsr1	98	53.827	ENSPANG00000024463	TSR1	99	54.388	Papio_anubis
ENSSFOG00015005455	tsr1	100	76.679	ENSPKIG00000013972	tsr1	100	76.886	Paramormyrops_kingsleyae
ENSSFOG00015005455	tsr1	86	55.961	ENSPSIG00000018258	TSR1	99	56.206	Pelodiscus_sinensis
ENSSFOG00015005455	tsr1	99	75.123	ENSPMGG00000011577	tsr1	99	74.632	Periophthalmus_magnuspinnatus
ENSSFOG00015005455	tsr1	99	55.379	ENSPEMG00000018033	Tsr1	99	55.623	Peromyscus_maniculatus_bairdii
ENSSFOG00015005455	tsr1	99	56.777	ENSPCIG00000009357	TSR1	97	56.654	Phascolarctos_cinereus
ENSSFOG00015005455	tsr1	100	72.518	ENSPFOG00000004483	TSR1	100	72.518	Poecilia_formosa
ENSSFOG00015005455	tsr1	100	71.770	ENSPLAG00000022320	tsr1	100	71.065	Poecilia_latipinna
ENSSFOG00015005455	tsr1	100	72.010	ENSPMEG00000004577	tsr1	99	72.249	Poecilia_mexicana
ENSSFOG00015005455	tsr1	97	72.537	ENSPREG00000010354	tsr1	96	72.325	Poecilia_reticulata
ENSSFOG00015005455	tsr1	98	52.030	ENSPPYG00000007792	TSR1	98	52.217	Pongo_abelii
ENSSFOG00015005455	tsr1	52	71.111	ENSPCAG00000012973	-	72	71.111	Procavia_capensis
ENSSFOG00015005455	tsr1	99	57.055	ENSPCOG00000017928	TSR1	99	56.985	Propithecus_coquereli
ENSSFOG00015005455	tsr1	99	57.038	ENSPVAG00000002162	TSR1	99	56.671	Pteropus_vampyrus
ENSSFOG00015005455	tsr1	100	75.424	ENSPNYG00000016163	tsr1	99	76.150	Pundamilia_nyererei
ENSSFOG00015005455	tsr1	100	72.381	ENSPNAG00000008659	tsr1	100	72.857	Pygocentrus_nattereri
ENSSFOG00015005455	tsr1	99	55.501	ENSRNOG00000002980	Tsr1	99	55.379	Rattus_norvegicus
ENSSFOG00015005455	tsr1	99	56.304	ENSRBIG00000040016	TSR1	99	56.304	Rhinopithecus_bieti
ENSSFOG00015005455	tsr1	99	56.304	ENSRROG00000030361	TSR1	99	56.304	Rhinopithecus_roxellana
ENSSFOG00015005455	tsr1	97	31.681	YDL060W	-	99	30.685	Saccharomyces_cerevisiae
ENSSFOG00015005455	tsr1	98	56.436	ENSSBOG00000020785	TSR1	98	56.382	Saimiri_boliviensis_boliviensis
ENSSFOG00015005455	tsr1	99	57.021	ENSSHAG00000011394	TSR1	99	57.369	Sarcophilus_harrisii
ENSSFOG00015005455	tsr1	100	74.580	ENSSMAG00000009504	tsr1	100	74.580	Scophthalmus_maximus
ENSSFOG00015005455	tsr1	100	76.168	ENSSDUG00000012074	tsr1	99	76.287	Seriola_dumerili
ENSSFOG00015005455	tsr1	100	76.230	ENSSLDG00000002031	tsr1	99	76.351	Seriola_lalandi_dorsalis
ENSSFOG00015005455	tsr1	92	57.371	ENSSARG00000000759	TSR1	93	57.371	Sorex_araneus
ENSSFOG00015005455	tsr1	99	57.734	ENSSPUG00000007042	TSR1	99	58.507	Sphenodon_punctatus
ENSSFOG00015005455	tsr1	100	74.313	ENSSPAG00000021951	tsr1	100	75.149	Stegastes_partitus
ENSSFOG00015005455	tsr1	99	57.650	ENSSSCG00000038534	TSR1	99	57.335	Sus_scrofa
ENSSFOG00015005455	tsr1	90	60.541	ENSTGUG00000005883	TSR1	100	60.459	Taeniopygia_guttata
ENSSFOG00015005455	tsr1	100	73.971	ENSTRUG00000004665	tsr1	100	73.640	Takifugu_rubripes
ENSSFOG00015005455	tsr1	99	73.594	ENSTNIG00000016196	tsr1	100	73.966	Tetraodon_nigroviridis
ENSSFOG00015005455	tsr1	66	73.077	ENSTBEG00000015275	-	66	73.077	Tupaia_belangeri
ENSSFOG00015005455	tsr1	99	56.671	ENSTTRG00000001177	TSR1	99	57.650	Tursiops_truncatus
ENSSFOG00015005455	tsr1	99	55.907	ENSUAMG00000025160	TSR1	99	55.732	Ursus_americanus
ENSSFOG00015005455	tsr1	95	55.879	ENSUMAG00000009294	TSR1	98	55.696	Ursus_maritimus
ENSSFOG00015005455	tsr1	83	52.041	ENSVPAG00000000228	TSR1	99	50.875	Vicugna_pacos
ENSSFOG00015005455	tsr1	99	56.220	ENSVVUG00000021767	TSR1	99	55.800	Vulpes_vulpes
ENSSFOG00015005455	tsr1	99	53.688	ENSXETG00000023797	tsr1	99	53.809	Xenopus_tropicalis
ENSSFOG00015005455	tsr1	100	72.222	ENSXCOG00000009635	tsr1	100	72.848	Xiphophorus_couchianus
ENSSFOG00015005455	tsr1	100	72.323	ENSXMAG00000001397	tsr1	97	72.716	Xiphophorus_maculatus