EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005477 (Gene tree)
Gene ID: 108923107
Gene Symbol: sept6
Alias: fc54b04|wu:fb70g05|wu:fc54b04|wu:fl76c07|zgc:66071
Full Name: septin-6-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 15704 bases
Position: chrKV410820.1:4906745-4922448
Accession: 108923107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008408	MMR_HSR1	PF01926.23	1.7e-07	1	1
ENSSFOP00015008398	MMR_HSR1	PF01926.23	3.1e-07	1	1
ENSSFOP00015008431	MMR_HSR1	PF01926.23	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008528	-	5338	XM_018733631	ENSSFOP00015008408	431 (aa)	XP_018589147	-
ENSSFOT00015008518	-	5384	-	ENSSFOP00015008398	427 (aa)	-	-
ENSSFOT00015008551	-	1876	-	ENSSFOP00015008431	427 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015005477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005477	sept6	67	42.268	ENSSFOG00015006639	sept9a	52	42.123
ENSSFOG00015005477	sept6	67	42.177	ENSSFOG00015023684	sept12	83	42.177
ENSSFOG00015005477	sept6	71	40.895	ENSSFOG00015014043	sept5	83	41.667
ENSSFOG00015005477	sept6	100	93.503	ENSSFOG00015010832	SEPT6	100	93.503
ENSSFOG00015005477	sept6	67	39.796	ENSSFOG00015006345	sept4a	63	39.796
ENSSFOG00015005477	sept6	81	39.437	ENSSFOG00015023747	sept15	90	39.437
ENSSFOG00015005477	sept6	70	42.208	ENSSFOG00015014108	zgc:63587	88	42.414
ENSSFOG00015005477	sept6	100	77.283	ENSSFOG00015018786	sept8	100	77.283
ENSSFOG00015005477	sept6	71	42.903	ENSSFOG00015011047	sept3	86	43.131
ENSSFOG00015005477	sept6	95	39.089	ENSSFOG00015020915	SEPT7	87	40.822
ENSSFOG00015005477	sept6	88	40.104	ENSSFOG00015014528	sept7a	87	40.323
ENSSFOG00015005477	sept6	67	43.197	ENSSFOG00015002137	SEPT4	73	42.963
ENSSFOG00015005477	sept6	67	43.003	ENSSFOG00015004877	-	54	43.003
ENSSFOG00015005477	sept6	100	76.112	ENSSFOG00015000919	sept8a	100	76.112
ENSSFOG00015005477	sept6	76	40.120	ENSSFOG00015018742	sept2	89	40.120
ENSSFOG00015005477	sept6	67	39.590	ENSSFOG00015010148	-	84	39.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005477	sept6	100	88.759	ENSG00000125354	SEPT6	100	88.759	Homo_sapiens
ENSSFOG00015005477	sept6	100	92.037	ENSAPOG00000000347	sept6	100	92.037	Acanthochromis_polyacanthus
ENSSFOG00015005477	sept6	99	92.254	ENSACIG00000013682	sept6	99	92.254	Amphilophus_citrinellus
ENSSFOG00015005477	sept6	100	92.037	ENSAOCG00000011293	sept6	100	92.037	Amphiprion_ocellaris
ENSSFOG00015005477	sept6	100	92.037	ENSAPEG00000005460	sept6	100	92.037	Amphiprion_percula
ENSSFOG00015005477	sept6	100	92.506	ENSATEG00000018814	sept6	100	92.506	Anabas_testudineus
ENSSFOG00015005477	sept6	100	88.759	ENSANAG00000033580	SEPT6	100	88.759	Aotus_nancymaae
ENSSFOG00015005477	sept6	100	92.272	ENSACLG00000001734	sept6	100	92.272	Astatotilapia_calliptera
ENSSFOG00015005477	sept6	100	93.039	ENSAMXG00000033660	sept6	100	93.039	Astyanax_mexicanus
ENSSFOG00015005477	sept6	100	88.759	ENSCJAG00000005022	SEPT6	100	88.759	Callithrix_jacchus
ENSSFOG00015005477	sept6	100	82.201	ENSCCAG00000023266	SEPT6	100	82.135	Cebus_capucinus
ENSSFOG00015005477	sept6	100	88.759	ENSCATG00000036060	SEPT6	100	88.759	Cercocebus_atys
ENSSFOG00015005477	sept6	100	88.759	ENSCSAG00000018351	SEPT6	100	88.759	Chlorocebus_sabaeus
ENSSFOG00015005477	sept6	100	88.759	ENSCANG00000016430	SEPT6	100	88.759	Colobus_angolensis_palliatus
ENSSFOG00015005477	sept6	100	88.993	ENSCGRG00001014207	Sept6	100	88.993	Cricetulus_griseus_chok1gshd
ENSSFOG00015005477	sept6	99	88.361	ENSCGRG00000007825	Sept6	100	89.209	Cricetulus_griseus_crigri
ENSSFOG00015005477	sept6	100	91.101	ENSCSEG00000002026	sept6	94	91.101	Cynoglossus_semilaevis
ENSSFOG00015005477	sept6	100	91.569	ENSCVAG00000004959	sept6	100	91.569	Cyprinodon_variegatus
ENSSFOG00015005477	sept6	100	92.740	ENSDARG00000010721	sept6	99	92.740	Danio_rerio
ENSSFOG00015005477	sept6	100	92.506	ENSELUG00000020499	sept6	96	92.506	Esox_lucius
ENSSFOG00015005477	sept6	100	88.993	ENSFCAG00000008744	SEPT6	100	88.993	Felis_catus
ENSSFOG00015005477	sept6	100	88.759	ENSFDAG00000002473	SEPT6	100	88.759	Fukomys_damarensis
ENSSFOG00015005477	sept6	100	91.569	ENSFHEG00000017987	sept6	100	91.569	Fundulus_heteroclitus
ENSSFOG00015005477	sept6	100	91.803	ENSGMOG00000001671	sept6	99	91.183	Gadus_morhua
ENSSFOG00015005477	sept6	100	92.037	ENSGAFG00000000922	sept6	100	92.037	Gambusia_affinis
ENSSFOG00015005477	sept6	100	92.037	ENSGACG00000017441	sept6	100	91.879	Gasterosteus_aculeatus
ENSSFOG00015005477	sept6	100	88.759	ENSGGOG00000009733	SEPT6	100	88.759	Gorilla_gorilla
ENSSFOG00015005477	sept6	100	92.272	ENSHBUG00000017506	sept6	100	92.272	Haplochromis_burtoni
ENSSFOG00015005477	sept6	100	92.506	ENSHCOG00000017047	sept6	100	92.506	Hippocampus_comes
ENSSFOG00015005477	sept6	100	92.272	ENSIPUG00000019317	sept6	84	92.272	Ictalurus_punctatus
ENSSFOG00015005477	sept6	100	88.993	ENSJJAG00000020412	Sept6	100	88.993	Jaculus_jaculus
ENSSFOG00015005477	sept6	100	91.569	ENSKMAG00000020207	sept6	100	91.569	Kryptolebias_marmoratus
ENSSFOG00015005477	sept6	100	92.037	ENSLBEG00000028683	sept6	95	92.037	Labrus_bergylta
ENSSFOG00015005477	sept6	100	93.911	ENSLOCG00000015233	sept6	100	94.015	Lepisosteus_oculatus
ENSSFOG00015005477	sept6	100	88.759	ENSMFAG00000003084	SEPT6	100	88.759	Macaca_fascicularis
ENSSFOG00015005477	sept6	100	88.759	ENSMMUG00000017669	SEPT6	100	88.759	Macaca_mulatta
ENSSFOG00015005477	sept6	100	88.759	ENSMNEG00000026932	SEPT6	100	88.759	Macaca_nemestrina
ENSSFOG00015005477	sept6	100	88.759	ENSMLEG00000030428	SEPT6	100	88.759	Mandrillus_leucophaeus
ENSSFOG00015005477	sept6	100	92.272	ENSMAMG00000019988	sept6	100	92.272	Mastacembelus_armatus
ENSSFOG00015005477	sept6	100	92.272	ENSMZEG00005007935	sept6	89	92.272	Maylandia_zebra
ENSSFOG00015005477	sept6	100	88.759	ENSMAUG00000018038	Sept6	100	88.759	Mesocricetus_auratus
ENSSFOG00015005477	sept6	98	89.048	ENSMOCG00000000500	Sept6	99	89.423	Microtus_ochrogaster
ENSSFOG00015005477	sept6	97	91.546	ENSMMOG00000004176	sept6	97	91.546	Mola_mola
ENSSFOG00015005477	sept6	100	91.569	ENSMALG00000007921	sept6	100	91.569	Monopterus_albus
ENSSFOG00015005477	sept6	100	87.822	MGP_CAROLIEiJ_G0032996	Sept6	100	87.822	Mus_caroli
ENSSFOG00015005477	sept6	100	87.588	ENSMUSG00000050379	Sept6	100	87.588	Mus_musculus
ENSSFOG00015005477	sept6	62	87.072	MGP_PahariEiJ_G0031540	-	71	87.072	Mus_pahari
ENSSFOG00015005477	sept6	100	87.822	MGP_SPRETEiJ_G0034149	Sept6	100	87.822	Mus_spretus
ENSSFOG00015005477	sept6	97	87.981	ENSMLUG00000005623	SEPT6	95	87.981	Myotis_lucifugus
ENSSFOG00015005477	sept6	100	87.822	ENSNGAG00000010702	Sept6	100	87.822	Nannospalax_galili
ENSSFOG00015005477	sept6	99	84.507	ENSNBRG00000011675	sept6	99	84.507	Neolamprologus_brichardi
ENSSFOG00015005477	sept6	100	88.759	ENSNLEG00000014873	SEPT6	100	88.759	Nomascus_leucogenys
ENSSFOG00015005477	sept6	100	92.272	ENSONIG00000002528	sept6	100	91.898	Oreochromis_niloticus
ENSSFOG00015005477	sept6	100	92.037	ENSORLG00000000997	sept6	100	92.750	Oryzias_latipes
ENSSFOG00015005477	sept6	100	92.037	ENSORLG00020003886	sept6	100	92.037	Oryzias_latipes_hni
ENSSFOG00015005477	sept6	100	92.037	ENSORLG00015013025	sept6	100	92.037	Oryzias_latipes_hsok
ENSSFOG00015005477	sept6	100	90.867	ENSOMEG00000014650	sept6	100	90.867	Oryzias_melastigma
ENSSFOG00015005477	sept6	100	88.759	ENSPPAG00000040865	SEPT6	100	88.759	Pan_paniscus
ENSSFOG00015005477	sept6	100	88.759	ENSPPRG00000023588	SEPT6	100	88.759	Panthera_pardus
ENSSFOG00015005477	sept6	96	76.399	ENSPTIG00000015338	SEPT6	99	76.399	Panthera_tigris_altaica
ENSSFOG00015005477	sept6	100	88.525	ENSPTRG00000022227	SEPT6	100	88.525	Pan_troglodytes
ENSSFOG00015005477	sept6	100	88.759	ENSPANG00000000899	SEPT6	100	88.759	Papio_anubis
ENSSFOG00015005477	sept6	99	92.488	ENSPKIG00000013948	SEPT6	100	93.000	Paramormyrops_kingsleyae
ENSSFOG00015005477	sept6	100	89.696	ENSPKIG00000019114	sept6	100	89.696	Paramormyrops_kingsleyae
ENSSFOG00015005477	sept6	99	90.141	ENSPMGG00000012133	sept6	100	90.141	Periophthalmus_magnuspinnatus
ENSSFOG00015005477	sept6	100	88.993	ENSPEMG00000016450	Sept6	100	88.993	Peromyscus_maniculatus_bairdii
ENSSFOG00015005477	sept6	100	86.183	ENSPCIG00000028910	SEPT6	100	86.183	Phascolarctos_cinereus
ENSSFOG00015005477	sept6	98	92.124	ENSPFOG00000024721	sept6	96	92.124	Poecilia_formosa
ENSSFOG00015005477	sept6	100	92.037	ENSPLAG00000019878	sept6	100	92.037	Poecilia_latipinna
ENSSFOG00015005477	sept6	54	90.000	ENSPLAG00000005147	sept6	94	90.000	Poecilia_latipinna
ENSSFOG00015005477	sept6	100	92.037	ENSPMEG00000023470	sept6	100	92.037	Poecilia_mexicana
ENSSFOG00015005477	sept6	100	91.803	ENSPREG00000012310	sept6	100	91.803	Poecilia_reticulata
ENSSFOG00015005477	sept6	100	87.119	ENSPPYG00000020673	SEPT6	100	87.119	Pongo_abelii
ENSSFOG00015005477	sept6	100	92.272	ENSPNYG00000009709	sept6	100	93.000	Pundamilia_nyererei
ENSSFOG00015005477	sept6	100	92.807	ENSPNAG00000021638	sept6	100	92.807	Pygocentrus_nattereri
ENSSFOG00015005477	sept6	100	88.759	ENSRBIG00000044672	SEPT6	100	88.759	Rhinopithecus_bieti
ENSSFOG00015005477	sept6	100	88.759	ENSRROG00000038667	SEPT6	100	88.759	Rhinopithecus_roxellana
ENSSFOG00015005477	sept6	100	88.525	ENSSBOG00000024143	SEPT6	100	88.525	Saimiri_boliviensis_boliviensis
ENSSFOG00015005477	sept6	99	86.118	ENSSHAG00000007460	SEPT6	98	86.118	Sarcophilus_harrisii
ENSSFOG00015005477	sept6	100	91.569	ENSSMAG00000012785	sept6	100	91.569	Scophthalmus_maximus
ENSSFOG00015005477	sept6	100	92.037	ENSSDUG00000005575	sept6	100	92.037	Seriola_dumerili
ENSSFOG00015005477	sept6	100	92.037	ENSSLDG00000003277	sept6	100	92.037	Seriola_lalandi_dorsalis
ENSSFOG00015005477	sept6	100	92.037	ENSSPAG00000010108	sept6	100	92.037	Stegastes_partitus
ENSSFOG00015005477	sept6	100	90.632	ENSTRUG00000010830	sept6	99	92.000	Takifugu_rubripes
ENSSFOG00015005477	sept6	100	89.930	ENSTNIG00000015761	sept6	100	89.559	Tetraodon_nigroviridis
ENSSFOG00015005477	sept6	56	87.917	ENSXCOG00000016712	sept6	89	87.917	Xiphophorus_couchianus
ENSSFOG00015005477	sept6	100	92.037	ENSXMAG00000013699	sept6	100	92.037	Xiphophorus_maculatus