EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005557 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 1118 bases
Position: chrKV410832.1:751807-752924
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008500	zf-C2H2	PF00096.26	8.7e-10	1	2
ENSSFOP00015008500	zf-C2H2	PF00096.26	8.7e-10	2	2
ENSSFOP00015008500	zf-met	PF12874.7	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008620	-	831	-	ENSSFOP00015008500	156 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015005557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005557	-	60	52.459	ENSSFOG00015006108	-	56	52.459
ENSSFOG00015005557	-	50	50.000	ENSSFOG00015015958	-	55	50.000
ENSSFOG00015005557	-	71	52.632	ENSSFOG00015008577	-	88	52.632
ENSSFOG00015005557	-	51	53.846	ENSSFOG00015013448	-	80	53.846
ENSSFOG00015005557	-	64	56.098	ENSSFOG00015003121	znf668	68	56.098
ENSSFOG00015005557	-	65	45.455	ENSSFOG00015012207	-	69	45.455
ENSSFOG00015005557	-	71	52.727	ENSSFOG00015020993	-	93	52.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005557	-	67	58.654	ENSGALG00000015009	ZBTB49	50	58.654	Gallus_gallus
ENSSFOG00015005557	-	54	68.235	ENSHGLG00000014609	-	71	68.235	Heterocephalus_glaber_female
ENSSFOG00015005557	-	54	68.235	ENSHGLG00100016493	-	71	68.235	Heterocephalus_glaber_male
ENSSFOG00015005557	-	56	70.115	ENSJJAG00000015468	-	64	64.516	Jaculus_jaculus
ENSSFOG00015005557	-	56	68.966	MGP_CAROLIEiJ_G0027176	Zbtb49	61	76.923	Mus_caroli
ENSSFOG00015005557	-	56	68.966	ENSMUSG00000029127	Zbtb49	60	76.923	Mus_musculus
ENSSFOG00015005557	-	56	68.966	MGP_PahariEiJ_G0016960	Zbtb49	66	76.923	Mus_pahari
ENSSFOG00015005557	-	56	68.966	MGP_SPRETEiJ_G0028173	Zbtb49	61	76.923	Mus_spretus
ENSSFOG00015005557	-	67	58.654	ENSSPUG00000007609	ZBTB49	50	58.654	Sphenodon_punctatus