EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015005630 (Gene tree)
Gene ID: 108921813
Gene Symbol: pop5
Alias: fc69d03|wu:fc69d03|wu:fy24c05|zgc:110616
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 14972 bases
Position: chrKV410808.1:3297849-3312820
Accession: 108921813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008627	RNase_P_Rpp14	PF01900.19	3.2e-28	1	1
ENSSFOP00015008637	RNase_P_Rpp14	PF01900.19	3.2e-28	1	1
ENSSFOP00015008650	RNase_P_Rpp14	PF01900.19	3.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008775	-	915	XM_018731530	ENSSFOP00015008650	168 (aa)	XP_018587046	A0A1W4YFF2
ENSSFOT00015008761	-	1149	-	ENSSFOP00015008637	154 (aa)	-	-
ENSSFOT00015008751	-	1420	-	ENSSFOP00015008627	154 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015005630's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005630	pop5	87	55.970	ENSG00000167272	POP5	91	54.362	Homo_sapiens
ENSSFOG00015005630	pop5	87	69.403	ENSAPOG00000023686	POP5	89	64.865	Acanthochromis_polyacanthus
ENSSFOG00015005630	pop5	100	51.765	ENSAMEG00000008503	POP5	88	52.318	Ailuropoda_melanoleuca
ENSSFOG00015005630	pop5	87	74.627	ENSACIG00000018362	pop5	89	73.469	Amphilophus_citrinellus
ENSSFOG00015005630	pop5	87	69.403	ENSAOCG00000001930	pop5	89	66.892	Amphiprion_ocellaris
ENSSFOG00015005630	pop5	87	70.149	ENSAPEG00000006795	pop5	89	67.568	Amphiprion_percula
ENSSFOG00015005630	pop5	88	72.109	ENSATEG00000016792	pop5	88	72.109	Anabas_testudineus
ENSSFOG00015005630	pop5	56	63.830	ENSAPLG00000015761	POP5	87	63.830	Anas_platyrhynchos
ENSSFOG00015005630	pop5	94	49.689	ENSACAG00000003091	POP5	89	52.027	Anolis_carolinensis
ENSSFOG00015005630	pop5	87	59.259	ENSANAG00000023744	POP5	91	57.333	Aotus_nancymaae
ENSSFOG00015005630	pop5	88	71.429	ENSACLG00000021131	-	87	71.429	Astatotilapia_calliptera
ENSSFOG00015005630	pop5	90	65.789	ENSAMXG00000038175	pop5	88	65.789	Astyanax_mexicanus
ENSSFOG00015005630	pop5	100	53.254	ENSBTAG00000005385	POP5	84	55.634	Bos_taurus
ENSSFOG00015005630	pop5	87	55.970	ENSCJAG00000001309	POP5	91	54.362	Callithrix_jacchus
ENSSFOG00015005630	pop5	100	53.571	ENSCAFG00000010389	POP5	88	53.691	Canis_familiaris
ENSSFOG00015005630	pop5	100	53.571	ENSCAFG00020020663	POP5	88	53.691	Canis_lupus_dingo
ENSSFOG00015005630	pop5	100	53.254	ENSCHIG00000016402	POP5	88	54.362	Capra_hircus
ENSSFOG00015005630	pop5	100	52.663	ENSTSYG00000027616	POP5	88	53.691	Carlito_syrichta
ENSSFOG00015005630	pop5	67	55.752	ENSCAPG00000016873	POP5	77	60.920	Cavia_aperea
ENSSFOG00015005630	pop5	100	51.190	ENSCPOG00000012337	POP5	85	53.521	Cavia_porcellus
ENSSFOG00015005630	pop5	87	55.970	ENSCCAG00000023154	POP5	91	54.362	Cebus_capucinus
ENSSFOG00015005630	pop5	87	55.970	ENSCATG00000036825	POP5	91	54.362	Cercocebus_atys
ENSSFOG00015005630	pop5	100	52.632	ENSCLAG00000007808	POP5	88	53.691	Chinchilla_lanigera
ENSSFOG00015005630	pop5	87	55.970	ENSCSAG00000002246	POP5	91	54.362	Chlorocebus_sabaeus
ENSSFOG00015005630	pop5	87	48.507	ENSCHOG00000013969	POP5	86	47.619	Choloepus_hoffmanni
ENSSFOG00015005630	pop5	98	58.788	ENSCPBG00000011331	POP5	88	62.162	Chrysemys_picta_bellii
ENSSFOG00015005630	pop5	87	55.970	ENSCANG00000028001	POP5	91	54.362	Colobus_angolensis_palliatus
ENSSFOG00015005630	pop5	100	54.118	ENSCGRG00001017974	Pop5	84	58.042	Cricetulus_griseus_chok1gshd
ENSSFOG00015005630	pop5	100	54.118	ENSCGRG00000010102	Pop5	84	58.042	Cricetulus_griseus_crigri
ENSSFOG00015005630	pop5	87	68.657	ENSCSEG00000008332	-	88	66.667	Cynoglossus_semilaevis
ENSSFOG00015005630	pop5	86	68.421	ENSCSEG00000011103	pop5	91	67.647	Cynoglossus_semilaevis
ENSSFOG00015005630	pop5	95	46.250	ENSCVAG00000009152	-	87	46.622	Cyprinodon_variegatus
ENSSFOG00015005630	pop5	91	63.226	ENSDARG00000053452	pop5	91	63.636	Danio_rerio
ENSSFOG00015005630	pop5	87	56.204	ENSDNOG00000012668	-	78	54.667	Dasypus_novemcinctus
ENSSFOG00015005630	pop5	87	54.478	ENSDNOG00000045952	-	86	53.061	Dasypus_novemcinctus
ENSSFOG00015005630	pop5	87	56.716	ENSDORG00000029401	Pop5	89	55.034	Dipodomys_ordii
ENSSFOG00015005630	pop5	88	30.612	FBgn0036696	CG14057	99	30.612	Drosophila_melanogaster
ENSSFOG00015005630	pop5	99	49.405	ENSETEG00000009283	POP5	83	51.773	Echinops_telfairi
ENSSFOG00015005630	pop5	98	42.169	ENSEBUG00000016369	pop5	88	45.890	Eptatretus_burgeri
ENSSFOG00015005630	pop5	100	51.190	ENSEASG00005004714	POP5	88	53.691	Equus_asinus_asinus
ENSSFOG00015005630	pop5	100	51.190	ENSECAG00000010012	POP5	88	53.691	Equus_caballus
ENSSFOG00015005630	pop5	95	73.292	ENSELUG00000023394	pop5	91	76.871	Esox_lucius
ENSSFOG00015005630	pop5	100	51.786	ENSFCAG00000042614	POP5	88	53.691	Felis_catus
ENSSFOG00015005630	pop5	88	61.224	ENSFALG00000007537	POP5	88	61.224	Ficedula_albicollis
ENSSFOG00015005630	pop5	99	50.595	ENSFDAG00000009972	POP5	89	53.020	Fukomys_damarensis
ENSSFOG00015005630	pop5	98	66.061	ENSFHEG00000022341	pop5	89	69.388	Fundulus_heteroclitus
ENSSFOG00015005630	pop5	85	63.359	ENSGMOG00000001073	pop5	99	63.359	Gadus_morhua
ENSSFOG00015005630	pop5	84	58.156	ENSGALG00000007124	POP5	50	58.156	Gallus_gallus
ENSSFOG00015005630	pop5	87	69.403	ENSGAFG00000005937	-	88	68.027	Gambusia_affinis
ENSSFOG00015005630	pop5	87	69.403	ENSGACG00000012710	-	90	66.667	Gasterosteus_aculeatus
ENSSFOG00015005630	pop5	97	58.389	ENSGAGG00000016005	POP5	88	61.486	Gopherus_agassizii
ENSSFOG00015005630	pop5	87	55.970	ENSGGOG00000013505	POP5	91	54.362	Gorilla_gorilla
ENSSFOG00015005630	pop5	88	72.789	ENSHBUG00000011718	-	88	72.789	Haplochromis_burtoni
ENSSFOG00015005630	pop5	100	51.479	ENSHGLG00000011786	POP5	89	53.691	Heterocephalus_glaber_female
ENSSFOG00015005630	pop5	100	51.479	ENSHGLG00100014284	POP5	89	53.691	Heterocephalus_glaber_male
ENSSFOG00015005630	pop5	88	62.585	ENSHCOG00000011809	pop5	90	62.585	Hippocampus_comes
ENSSFOG00015005630	pop5	89	64.667	ENSIPUG00000003437	pop5	90	64.667	Ictalurus_punctatus
ENSSFOG00015005630	pop5	100	52.071	ENSSTOG00000012577	POP5	88	53.020	Ictidomys_tridecemlineatus
ENSSFOG00015005630	pop5	87	60.000	ENSJJAG00000001080	Pop5	86	58.784	Jaculus_jaculus
ENSSFOG00015005630	pop5	97	68.456	ENSKMAG00000011158	-	86	71.429	Kryptolebias_marmoratus
ENSSFOG00015005630	pop5	96	64.596	ENSLBEG00000008652	pop5	80	68.707	Labrus_bergylta
ENSSFOG00015005630	pop5	96	58.282	ENSLACG00000018188	POP5	93	61.184	Latimeria_chalumnae
ENSSFOG00015005630	pop5	88	73.649	ENSLOCG00000002924	pop5	88	73.649	Lepisosteus_oculatus
ENSSFOG00015005630	pop5	99	51.163	ENSLAFG00000014545	POP5	88	53.642	Loxodonta_africana
ENSSFOG00015005630	pop5	87	55.970	ENSMFAG00000045933	POP5	95	54.362	Macaca_fascicularis
ENSSFOG00015005630	pop5	87	55.970	ENSMMUG00000040120	POP5	91	54.362	Macaca_mulatta
ENSSFOG00015005630	pop5	87	55.970	ENSMNEG00000041716	POP5	91	54.362	Macaca_nemestrina
ENSSFOG00015005630	pop5	87	55.224	ENSMLEG00000029377	POP5	91	53.691	Mandrillus_leucophaeus
ENSSFOG00015005630	pop5	96	64.865	ENSMAMG00000002108	pop5	88	68.027	Mastacembelus_armatus
ENSSFOG00015005630	pop5	88	71.429	ENSMZEG00005000069	-	88	71.429	Maylandia_zebra
ENSSFOG00015005630	pop5	100	53.529	ENSMAUG00000019670	Pop5	84	57.343	Mesocricetus_auratus
ENSSFOG00015005630	pop5	100	53.254	ENSMICG00000008692	POP5	88	54.362	Microcebus_murinus
ENSSFOG00015005630	pop5	100	53.846	ENSMOCG00000013322	Pop5	83	57.042	Microtus_ochrogaster
ENSSFOG00015005630	pop5	85	67.606	ENSMMOG00000010471	pop5	87	67.606	Mola_mola
ENSSFOG00015005630	pop5	98	57.317	ENSMODG00000003066	POP5	60	60.135	Monodelphis_domestica
ENSSFOG00015005630	pop5	87	73.134	ENSMALG00000017797	-	88	70.068	Monopterus_albus
ENSSFOG00015005630	pop5	100	54.706	MGP_CAROLIEiJ_G0027618	Pop5	84	57.343	Mus_caroli
ENSSFOG00015005630	pop5	100	54.706	ENSMUSG00000060152	Pop5	84	57.343	Mus_musculus
ENSSFOG00015005630	pop5	100	54.118	MGP_PahariEiJ_G0024198	Pop5	84	56.643	Mus_pahari
ENSSFOG00015005630	pop5	100	54.118	MGP_SPRETEiJ_G0028616	Pop5	84	56.643	Mus_spretus
ENSSFOG00015005630	pop5	87	54.478	ENSMPUG00000003221	POP5	88	53.020	Mustela_putorius_furo
ENSSFOG00015005630	pop5	87	56.618	ENSMLUG00000014657	POP5	90	54.967	Myotis_lucifugus
ENSSFOG00015005630	pop5	87	56.716	ENSNGAG00000002594	Pop5	83	55.634	Nannospalax_galili
ENSSFOG00015005630	pop5	80	63.415	ENSNBRG00000001020	-	100	58.696	Neolamprologus_brichardi
ENSSFOG00015005630	pop5	87	55.970	ENSNLEG00000015839	POP5	91	54.362	Nomascus_leucogenys
ENSSFOG00015005630	pop5	93	56.688	ENSMEUG00000015288	POP5	91	58.108	Notamacropus_eugenii
ENSSFOG00015005630	pop5	87	54.478	ENSOPRG00000004327	POP5	83	53.521	Ochotona_princeps
ENSSFOG00015005630	pop5	99	45.509	ENSODEG00000010351	-	88	50.000	Octodon_degus
ENSSFOG00015005630	pop5	87	54.478	ENSODEG00000006549	-	88	53.691	Octodon_degus
ENSSFOG00015005630	pop5	88	72.109	ENSONIG00000011172	pop5	88	72.109	Oreochromis_niloticus
ENSSFOG00015005630	pop5	67	59.292	ENSOANG00000001792	-	82	64.894	Ornithorhynchus_anatinus
ENSSFOG00015005630	pop5	100	52.976	ENSOCUG00000006537	POP5	87	54.362	Oryctolagus_cuniculus
ENSSFOG00015005630	pop5	87	70.149	ENSORLG00000014745	pop5	87	66.897	Oryzias_latipes
ENSSFOG00015005630	pop5	87	71.642	ENSORLG00020001168	pop5	87	68.276	Oryzias_latipes_hni
ENSSFOG00015005630	pop5	85	71.756	ENSORLG00015013535	pop5	87	66.667	Oryzias_latipes_hsok
ENSSFOG00015005630	pop5	98	62.424	ENSOMEG00000017643	pop5	88	68.027	Oryzias_melastigma
ENSSFOG00015005630	pop5	87	55.224	ENSOGAG00000008528	POP5	90	53.741	Otolemur_garnettii
ENSSFOG00015005630	pop5	100	52.632	ENSOARG00000012764	POP5	88	54.305	Ovis_aries
ENSSFOG00015005630	pop5	87	55.970	ENSPPAG00000043719	POP5	91	54.362	Pan_paniscus
ENSSFOG00015005630	pop5	100	51.786	ENSPPRG00000006474	POP5	88	53.691	Panthera_pardus
ENSSFOG00015005630	pop5	100	51.786	ENSPTIG00000012194	POP5	88	53.691	Panthera_tigris_altaica
ENSSFOG00015005630	pop5	87	55.970	ENSPTRG00000005543	POP5	91	54.362	Pan_troglodytes
ENSSFOG00015005630	pop5	87	55.970	ENSPANG00000014166	POP5	91	54.362	Papio_anubis
ENSSFOG00015005630	pop5	90	74.834	ENSPKIG00000025154	pop5	91	74.834	Paramormyrops_kingsleyae
ENSSFOG00015005630	pop5	61	61.682	ENSPSIG00000013154	POP5	75	66.667	Pelodiscus_sinensis
ENSSFOG00015005630	pop5	97	60.403	ENSPMGG00000000812	-	89	61.224	Periophthalmus_magnuspinnatus
ENSSFOG00015005630	pop5	100	54.118	ENSPEMG00000017493	Pop5	84	58.042	Peromyscus_maniculatus_bairdii
ENSSFOG00015005630	pop5	87	68.657	ENSPFOG00000013000	pop5	96	64.423	Poecilia_formosa
ENSSFOG00015005630	pop5	87	68.657	ENSPLAG00000014070	pop5	88	66.667	Poecilia_latipinna
ENSSFOG00015005630	pop5	87	69.403	ENSPMEG00000012863	POP5	88	66.667	Poecilia_mexicana
ENSSFOG00015005630	pop5	87	69.403	ENSPMEG00000024039	pop5	88	66.667	Poecilia_mexicana
ENSSFOG00015005630	pop5	87	70.149	ENSPREG00000020151	pop5	88	68.027	Poecilia_reticulata
ENSSFOG00015005630	pop5	87	56.716	ENSPPYG00000005036	POP5	77	55.034	Pongo_abelii
ENSSFOG00015005630	pop5	68	52.885	ENSPCAG00000004788	POP5	100	52.885	Procavia_capensis
ENSSFOG00015005630	pop5	100	52.663	ENSPCOG00000017618	POP5	88	53.691	Propithecus_coquereli
ENSSFOG00015005630	pop5	100	52.381	ENSPVAG00000002233	POP5	88	54.362	Pteropus_vampyrus
ENSSFOG00015005630	pop5	88	72.789	ENSPNYG00000002679	pop5	88	72.789	Pundamilia_nyererei
ENSSFOG00015005630	pop5	92	59.355	ENSPNAG00000012662	pop5	85	60.927	Pygocentrus_nattereri
ENSSFOG00015005630	pop5	87	55.224	ENSRNOG00000001199	Pop5	84	54.225	Rattus_norvegicus
ENSSFOG00015005630	pop5	87	55.224	ENSRBIG00000043505	POP5	95	53.691	Rhinopithecus_bieti
ENSSFOG00015005630	pop5	87	55.224	ENSRROG00000045063	POP5	95	53.691	Rhinopithecus_roxellana
ENSSFOG00015005630	pop5	87	55.970	ENSSBOG00000032691	POP5	99	55.224	Saimiri_boliviensis_boliviensis
ENSSFOG00015005630	pop5	87	70.896	ENSSMAG00000018868	pop5	88	69.799	Scophthalmus_maximus
ENSSFOG00015005630	pop5	98	66.667	ENSSDUG00000001282	-	91	69.079	Seriola_dumerili
ENSSFOG00015005630	pop5	98	68.485	ENSSLDG00000003801	-	91	70.395	Seriola_lalandi_dorsalis
ENSSFOG00015005630	pop5	98	68.485	ENSSLDG00000017031	pop5	91	70.395	Seriola_lalandi_dorsalis
ENSSFOG00015005630	pop5	68	51.923	ENSSARG00000005564	POP5	64	51.923	Sorex_araneus
ENSSFOG00015005630	pop5	88	60.135	ENSSPUG00000015531	POP5	89	60.135	Sphenodon_punctatus
ENSSFOG00015005630	pop5	87	70.149	ENSSPAG00000015306	pop5	88	68.707	Stegastes_partitus
ENSSFOG00015005630	pop5	100	53.846	ENSSSCG00000009912	POP5	88	55.034	Sus_scrofa
ENSSFOG00015005630	pop5	98	55.488	ENSTGUG00000009602	POP5	90	59.184	Taeniopygia_guttata
ENSSFOG00015005630	pop5	95	66.049	ENSTRUG00000016214	pop5	89	70.068	Takifugu_rubripes
ENSSFOG00015005630	pop5	87	70.896	ENSTNIG00000011465	pop5	85	68.310	Tetraodon_nigroviridis
ENSSFOG00015005630	pop5	100	52.663	ENSTBEG00000010131	POP5	88	53.691	Tupaia_belangeri
ENSSFOG00015005630	pop5	100	52.071	ENSTTRG00000000153	POP5	88	53.691	Tursiops_truncatus
ENSSFOG00015005630	pop5	99	50.602	ENSUAMG00000015541	POP5	68	51.020	Ursus_americanus
ENSSFOG00015005630	pop5	100	52.381	ENSUMAG00000006137	POP5	88	53.020	Ursus_maritimus
ENSSFOG00015005630	pop5	99	53.571	ENSVPAG00000010365	POP5	88	55.705	Vicugna_pacos
ENSSFOG00015005630	pop5	100	53.571	ENSVVUG00000021154	POP5	88	53.691	Vulpes_vulpes
ENSSFOG00015005630	pop5	62	59.615	ENSXETG00000031793	POP5	86	62.245	Xenopus_tropicalis
ENSSFOG00015005630	pop5	87	69.403	ENSXMAG00000003508	-	77	68.027	Xiphophorus_maculatus