EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015005760 (Gene tree)
Gene ID: 108925471
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3370 bases
Position: chrKV410842.1:3329887-3333256
Accession: 108925471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008809	RNase_H2_suC	PF08615.11	8.2e-21	1	1
ENSSFOP00015008826	RNase_H2_suC	PF08615.11	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015008934	-	518	XM_018737432	ENSSFOP00015008809	137 (aa)	XP_018592948	A0A0P7VM56
ENSSFOT00015008951	-	500	-	ENSSFOP00015008826	133 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015005760's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005760	rnaseh2c	99	68.148	ENSAPOG00000012901	rnaseh2c	99	68.148	Acanthochromis_polyacanthus
ENSSFOG00015005760	rnaseh2c	99	68.148	ENSACIG00000022433	rnaseh2c	99	68.148	Amphilophus_citrinellus
ENSSFOG00015005760	rnaseh2c	99	67.407	ENSAOCG00000016855	rnaseh2c	99	67.407	Amphiprion_ocellaris
ENSSFOG00015005760	rnaseh2c	99	68.148	ENSAPEG00000009850	rnaseh2c	99	68.148	Amphiprion_percula
ENSSFOG00015005760	rnaseh2c	99	68.889	ENSATEG00000014395	rnaseh2c	99	68.889	Anabas_testudineus
ENSSFOG00015005760	rnaseh2c	99	68.889	ENSACLG00000016950	rnaseh2c	99	68.889	Astatotilapia_calliptera
ENSSFOG00015005760	rnaseh2c	99	72.593	ENSAMXG00000001210	rnaseh2c	100	72.593	Astyanax_mexicanus
ENSSFOG00015005760	rnaseh2c	98	52.985	ENSCPBG00000023408	-	96	52.985	Chrysemys_picta_bellii
ENSSFOG00015005760	rnaseh2c	99	67.407	ENSCSEG00000005808	rnaseh2c	98	67.407	Cynoglossus_semilaevis
ENSSFOG00015005760	rnaseh2c	99	67.407	ENSCVAG00000006337	rnaseh2c	99	67.407	Cyprinodon_variegatus
ENSSFOG00015005760	rnaseh2c	99	71.852	ENSDARG00000089637	rnaseh2c	99	71.852	Danio_rerio
ENSSFOG00015005760	rnaseh2c	91	48.387	ENSEBUG00000014939	rnaseh2c	79	48.387	Eptatretus_burgeri
ENSSFOG00015005760	rnaseh2c	97	67.669	ENSELUG00000007345	rnaseh2c	97	67.669	Esox_lucius
ENSSFOG00015005760	rnaseh2c	98	68.702	ENSFHEG00000002419	rnaseh2c	96	68.702	Fundulus_heteroclitus
ENSSFOG00015005760	rnaseh2c	67	64.045	ENSGMOG00000008727	rnaseh2c	99	64.045	Gadus_morhua
ENSSFOG00015005760	rnaseh2c	99	65.185	ENSGAFG00000016755	rnaseh2c	82	65.185	Gambusia_affinis
ENSSFOG00015005760	rnaseh2c	98	52.985	ENSGAGG00000008193	-	96	52.985	Gopherus_agassizii
ENSSFOG00015005760	rnaseh2c	99	68.148	ENSHBUG00000012806	rnaseh2c	99	68.148	Haplochromis_burtoni
ENSSFOG00015005760	rnaseh2c	99	62.963	ENSHCOG00000007177	rnaseh2c	99	62.963	Hippocampus_comes
ENSSFOG00015005760	rnaseh2c	99	65.152	ENSIPUG00000018044	rnaseh2c	99	63.704	Ictalurus_punctatus
ENSSFOG00015005760	rnaseh2c	99	65.185	ENSKMAG00000004184	rnaseh2c	99	65.185	Kryptolebias_marmoratus
ENSSFOG00015005760	rnaseh2c	99	68.421	ENSLBEG00000005742	rnaseh2c	99	67.647	Labrus_bergylta
ENSSFOG00015005760	rnaseh2c	96	58.015	ENSLACG00000010120	-	94	57.463	Latimeria_chalumnae
ENSSFOG00015005760	rnaseh2c	99	70.370	ENSMAMG00000021610	rnaseh2c	99	70.370	Mastacembelus_armatus
ENSSFOG00015005760	rnaseh2c	99	68.889	ENSMZEG00005004796	rnaseh2c	99	68.889	Maylandia_zebra
ENSSFOG00015005760	rnaseh2c	99	68.939	ENSMMOG00000002869	rnaseh2c	99	68.889	Mola_mola
ENSSFOG00015005760	rnaseh2c	99	67.647	ENSMALG00000012198	rnaseh2c	99	67.647	Monopterus_albus
ENSSFOG00015005760	rnaseh2c	99	68.148	ENSNBRG00000001462	rnaseh2c	99	68.148	Neolamprologus_brichardi
ENSSFOG00015005760	rnaseh2c	99	67.407	ENSONIG00000005338	rnaseh2c	99	67.407	Oreochromis_niloticus
ENSSFOG00015005760	rnaseh2c	99	64.444	ENSORLG00000023473	rnaseh2c	99	64.444	Oryzias_latipes
ENSSFOG00015005760	rnaseh2c	99	64.444	ENSORLG00020019053	rnaseh2c	91	64.444	Oryzias_latipes_hni
ENSSFOG00015005760	rnaseh2c	99	65.185	ENSORLG00015017067	rnaseh2c	91	65.185	Oryzias_latipes_hsok
ENSSFOG00015005760	rnaseh2c	99	65.185	ENSOMEG00000018607	rnaseh2c	99	65.185	Oryzias_melastigma
ENSSFOG00015005760	rnaseh2c	99	74.815	ENSPKIG00000019331	rnaseh2c	99	74.815	Paramormyrops_kingsleyae
ENSSFOG00015005760	rnaseh2c	99	63.704	ENSPFOG00000009415	rnaseh2c	99	63.704	Poecilia_formosa
ENSSFOG00015005760	rnaseh2c	99	64.444	ENSPLAG00000023330	rnaseh2c	99	64.444	Poecilia_latipinna
ENSSFOG00015005760	rnaseh2c	99	64.444	ENSPMEG00000003696	rnaseh2c	99	64.444	Poecilia_mexicana
ENSSFOG00015005760	rnaseh2c	99	60.274	ENSPREG00000015384	rnaseh2c	72	60.274	Poecilia_reticulata
ENSSFOG00015005760	rnaseh2c	99	68.148	ENSPNYG00000014766	rnaseh2c	99	68.148	Pundamilia_nyererei
ENSSFOG00015005760	rnaseh2c	99	72.059	ENSPNAG00000019111	rnaseh2c	100	72.059	Pygocentrus_nattereri
ENSSFOG00015005760	rnaseh2c	98	67.176	ENSSMAG00000017738	rnaseh2c	99	65.926	Scophthalmus_maximus
ENSSFOG00015005760	rnaseh2c	99	69.630	ENSSDUG00000017285	rnaseh2c	99	69.630	Seriola_dumerili
ENSSFOG00015005760	rnaseh2c	99	69.630	ENSSLDG00000016030	rnaseh2c	99	69.630	Seriola_lalandi_dorsalis
ENSSFOG00015005760	rnaseh2c	93	51.181	ENSSPUG00000000842	-	86	51.145	Sphenodon_punctatus
ENSSFOG00015005760	rnaseh2c	99	67.407	ENSSPAG00000007536	rnaseh2c	99	67.407	Stegastes_partitus
ENSSFOG00015005760	rnaseh2c	100	63.910	ENSTRUG00000021845	rnaseh2c	99	63.704	Takifugu_rubripes
ENSSFOG00015005760	rnaseh2c	99	65.185	ENSTNIG00000000431	rnaseh2c	99	65.185	Tetraodon_nigroviridis
ENSSFOG00015005760	rnaseh2c	96	48.092	ENSXETG00000032466	-	96	48.092	Xenopus_tropicalis
ENSSFOG00015005760	rnaseh2c	94	66.667	ENSXCOG00000001611	rnaseh2c	96	66.667	Xiphophorus_couchianus
ENSSFOG00015005760	rnaseh2c	99	66.667	ENSXMAG00000003147	rnaseh2c	82	66.667	Xiphophorus_maculatus