EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015005808 (Gene tree)
Gene ID: 108932085
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9549 bases
Position: chrKV410985.1:1034213-1043761
Accession: 108932085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008984	NCBP3	PF10309.9	4e-22	1	1
ENSSFOP00015008957	NCBP3	PF10309.9	4.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009109	-	1797	-	ENSSFOP00015008984	598 (aa)	-	-
ENSSFOT00015009083	-	5857	XM_018748272	ENSSFOP00015008957	664 (aa)	XP_018603788	A0A1W4ZSG7

Gene Model

Click here to download ENSSFOG00015005808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005808	ncbp3	98	58.595	ENSG00000074356	NCBP3	100	58.480	Homo_sapiens
ENSSFOG00015005808	ncbp3	99	62.480	ENSAPOG00000020809	ncbp3	100	61.950	Acanthochromis_polyacanthus
ENSSFOG00015005808	ncbp3	98	58.182	ENSAMEG00000009372	NCBP3	100	55.572	Ailuropoda_melanoleuca
ENSSFOG00015005808	ncbp3	98	58.643	ENSACIG00000024257	ncbp3	98	78.421	Amphilophus_citrinellus
ENSSFOG00015005808	ncbp3	99	61.624	ENSAPEG00000020857	ncbp3	100	61.783	Amphiprion_percula
ENSSFOG00015005808	ncbp3	98	62.321	ENSATEG00000010801	ncbp3	100	62.441	Anabas_testudineus
ENSSFOG00015005808	ncbp3	91	58.738	ENSAPLG00000007373	NCBP3	100	57.717	Anas_platyrhynchos
ENSSFOG00015005808	ncbp3	96	52.000	ENSANAG00000020550	-	99	49.753	Aotus_nancymaae
ENSSFOG00015005808	ncbp3	92	56.369	ENSANAG00000024918	-	93	56.804	Aotus_nancymaae
ENSSFOG00015005808	ncbp3	99	60.653	ENSACLG00000000455	ncbp3	100	60.809	Astatotilapia_calliptera
ENSSFOG00015005808	ncbp3	98	66.424	ENSAMXG00000005968	ncbp3	100	66.810	Astyanax_mexicanus
ENSSFOG00015005808	ncbp3	98	57.295	ENSBTAG00000016621	NCBP3	100	56.642	Bos_taurus
ENSSFOG00015005808	ncbp3	97	56.991	ENSCAFG00000019371	NCBP3	95	57.014	Canis_familiaris
ENSSFOG00015005808	ncbp3	97	58.472	ENSCAFG00020008143	NCBP3	95	58.706	Canis_lupus_dingo
ENSSFOG00015005808	ncbp3	100	58.098	ENSCHIG00000009002	NCBP3	100	58.012	Capra_hircus
ENSSFOG00015005808	ncbp3	98	57.934	ENSTSYG00000008184	NCBP3	100	57.781	Carlito_syrichta
ENSSFOG00015005808	ncbp3	87	59.381	ENSCAPG00000016045	NCBP3	97	57.302	Cavia_aperea
ENSSFOG00015005808	ncbp3	98	58.202	ENSCPOG00000015529	NCBP3	100	57.710	Cavia_porcellus
ENSSFOG00015005808	ncbp3	98	57.549	ENSCCAG00000021154	NCBP3	100	57.456	Cebus_capucinus
ENSSFOG00015005808	ncbp3	97	57.831	ENSCATG00000013041	NCBP3	95	57.526	Cercocebus_atys
ENSSFOG00015005808	ncbp3	98	57.075	ENSCLAG00000012229	NCBP3	100	57.965	Chinchilla_lanigera
ENSSFOG00015005808	ncbp3	98	55.605	ENSCSAG00000013543	NCBP3	100	55.362	Chlorocebus_sabaeus
ENSSFOG00015005808	ncbp3	98	55.873	ENSCHOG00000012323	NCBP3	100	57.364	Choloepus_hoffmanni
ENSSFOG00015005808	ncbp3	100	58.438	ENSCPBG00000014824	NCBP3	100	58.671	Chrysemys_picta_bellii
ENSSFOG00015005808	ncbp3	98	54.766	ENSCANG00000033561	NCBP3	100	54.252	Colobus_angolensis_palliatus
ENSSFOG00015005808	ncbp3	98	57.035	ENSCGRG00001018538	Ncbp3	100	57.249	Cricetulus_griseus_chok1gshd
ENSSFOG00015005808	ncbp3	87	59.150	ENSCGRG00000015075	Ncbp3	100	57.190	Cricetulus_griseus_crigri
ENSSFOG00015005808	ncbp3	99	59.177	ENSCSEG00000006375	ncbp3	100	59.177	Cynoglossus_semilaevis
ENSSFOG00015005808	ncbp3	99	59.038	ENSCVAG00000020563	ncbp3	100	59.259	Cyprinodon_variegatus
ENSSFOG00015005808	ncbp3	98	63.885	ENSDARG00000044597	ncbp3	100	63.866	Danio_rerio
ENSSFOG00015005808	ncbp3	97	58.182	ENSDNOG00000006490	NCBP3	95	57.229	Dasypus_novemcinctus
ENSSFOG00015005808	ncbp3	100	56.848	ENSDORG00000010141	Ncbp3	100	56.406	Dipodomys_ordii
ENSSFOG00015005808	ncbp3	92	38.331	ENSEBUG00000004541	ncbp3	92	36.236	Eptatretus_burgeri
ENSSFOG00015005808	ncbp3	97	56.297	ENSEASG00005013399	NCBP3	95	57.273	Equus_asinus_asinus
ENSSFOG00015005808	ncbp3	97	56.449	ENSECAG00000008444	NCBP3	95	57.424	Equus_caballus
ENSSFOG00015005808	ncbp3	84	51.931	ENSEEUG00000008573	NCBP3	81	53.435	Erinaceus_europaeus
ENSSFOG00015005808	ncbp3	100	64.797	ENSELUG00000009182	ncbp3	100	65.816	Esox_lucius
ENSSFOG00015005808	ncbp3	98	57.014	ENSFCAG00000007929	NCBP3	100	57.965	Felis_catus
ENSSFOG00015005808	ncbp3	93	60.064	ENSFALG00000006704	NCBP3	98	59.022	Ficedula_albicollis
ENSSFOG00015005808	ncbp3	98	56.825	ENSFDAG00000013355	NCBP3	100	57.879	Fukomys_damarensis
ENSSFOG00015005808	ncbp3	98	54.779	ENSFHEG00000005607	ncbp3	100	54.092	Fundulus_heteroclitus
ENSSFOG00015005808	ncbp3	66	72.800	ENSGMOG00000001007	ncbp3	77	73.050	Gadus_morhua
ENSSFOG00015005808	ncbp3	100	57.919	ENSGALG00000002653	NCBP3	100	57.101	Gallus_gallus
ENSSFOG00015005808	ncbp3	81	63.129	ENSGAFG00000008912	ncbp3	80	62.254	Gambusia_affinis
ENSSFOG00015005808	ncbp3	99	55.861	ENSGACG00000020902	ncbp3	99	55.394	Gasterosteus_aculeatus
ENSSFOG00015005808	ncbp3	100	57.988	ENSGAGG00000014490	NCBP3	100	58.100	Gopherus_agassizii
ENSSFOG00015005808	ncbp3	98	58.084	ENSGGOG00000007496	NCBP3	100	58.419	Gorilla_gorilla
ENSSFOG00015005808	ncbp3	99	46.646	ENSHBUG00000019541	ncbp3	100	47.149	Haplochromis_burtoni
ENSSFOG00015005808	ncbp3	98	57.711	ENSHGLG00000015839	NCBP3	100	57.817	Heterocephalus_glaber_female
ENSSFOG00015005808	ncbp3	98	57.711	ENSHGLG00100007256	NCBP3	100	57.817	Heterocephalus_glaber_male
ENSSFOG00015005808	ncbp3	99	57.819	ENSHCOG00000004161	ncbp3	99	58.369	Hippocampus_comes
ENSSFOG00015005808	ncbp3	98	66.035	ENSIPUG00000024397	ncbp3	100	67.908	Ictalurus_punctatus
ENSSFOG00015005808	ncbp3	74	58.020	ENSSTOG00000002101	NCBP3	100	58.300	Ictidomys_tridecemlineatus
ENSSFOG00015005808	ncbp3	98	51.662	ENSJJAG00000000634	Ncbp3	100	50.627	Jaculus_jaculus
ENSSFOG00015005808	ncbp3	98	60.515	ENSKMAG00000001932	ncbp3	100	60.452	Kryptolebias_marmoratus
ENSSFOG00015005808	ncbp3	98	57.925	ENSLBEG00000001558	-	100	58.557	Labrus_bergylta
ENSSFOG00015005808	ncbp3	98	61.836	ENSLBEG00000006036	ncbp3	100	61.965	Labrus_bergylta
ENSSFOG00015005808	ncbp3	98	51.950	ENSLACG00000018791	NCBP3	100	52.807	Latimeria_chalumnae
ENSSFOG00015005808	ncbp3	98	68.563	ENSLOCG00000006706	ncbp3	100	69.706	Lepisosteus_oculatus
ENSSFOG00015005808	ncbp3	98	56.866	ENSLAFG00000002067	NCBP3	100	57.456	Loxodonta_africana
ENSSFOG00015005808	ncbp3	98	58.709	ENSMFAG00000024176	NCBP3	100	58.515	Macaca_fascicularis
ENSSFOG00015005808	ncbp3	98	58.709	ENSMMUG00000008556	NCBP3	100	58.515	Macaca_mulatta
ENSSFOG00015005808	ncbp3	97	58.006	ENSMNEG00000041374	NCBP3	95	57.848	Macaca_nemestrina
ENSSFOG00015005808	ncbp3	89	57.521	ENSMLEG00000034703	NCBP3	100	57.668	Mandrillus_leucophaeus
ENSSFOG00015005808	ncbp3	99	60.724	ENSMAMG00000022461	ncbp3	100	60.864	Mastacembelus_armatus
ENSSFOG00015005808	ncbp3	99	59.969	ENSMZEG00005027802	ncbp3	100	59.502	Maylandia_zebra
ENSSFOG00015005808	ncbp3	94	60.165	ENSMGAG00000004685	NCBP3	98	58.479	Meleagris_gallopavo
ENSSFOG00015005808	ncbp3	98	53.796	ENSMICG00000015798	NCBP3	100	54.574	Microcebus_murinus
ENSSFOG00015005808	ncbp3	98	58.434	ENSMOCG00000016446	Ncbp3	100	57.670	Microtus_ochrogaster
ENSSFOG00015005808	ncbp3	98	58.280	ENSMMOG00000012577	ncbp3	99	58.556	Mola_mola
ENSSFOG00015005808	ncbp3	98	60.088	ENSMALG00000009173	ncbp3	99	58.900	Monopterus_albus
ENSSFOG00015005808	ncbp3	98	57.466	MGP_CAROLIEiJ_G0016684	Ncbp3	100	57.670	Mus_caroli
ENSSFOG00015005808	ncbp3	98	57.919	ENSMUSG00000020783	Ncbp3	100	57.919	Mus_musculus
ENSSFOG00015005808	ncbp3	98	58.069	MGP_PahariEiJ_G0017817	Ncbp3	100	58.112	Mus_pahari
ENSSFOG00015005808	ncbp3	98	57.919	MGP_SPRETEiJ_G0017521	Ncbp3	100	57.919	Mus_spretus
ENSSFOG00015005808	ncbp3	97	57.599	ENSMPUG00000012357	NCBP3	95	57.511	Mustela_putorius_furo
ENSSFOG00015005808	ncbp3	98	56.581	ENSMLUG00000017060	NCBP3	100	56.786	Myotis_lucifugus
ENSSFOG00015005808	ncbp3	98	56.598	ENSNGAG00000020321	Ncbp3	100	58.088	Nannospalax_galili
ENSSFOG00015005808	ncbp3	84	59.030	ENSNBRG00000017354	ncbp3	90	76.829	Neolamprologus_brichardi
ENSSFOG00015005808	ncbp3	98	54.940	ENSNLEG00000017279	NCBP3	100	55.443	Nomascus_leucogenys
ENSSFOG00015005808	ncbp3	71	68.852	ENSMEUG00000015701	-	79	68.852	Notamacropus_eugenii
ENSSFOG00015005808	ncbp3	98	56.884	ENSOPRG00000016925	NCBP3	100	56.509	Ochotona_princeps
ENSSFOG00015005808	ncbp3	98	57.681	ENSODEG00000016617	NCBP3	100	58.174	Octodon_degus
ENSSFOG00015005808	ncbp3	99	58.659	ENSONIG00000007434	ncbp3	100	59.497	Oreochromis_niloticus
ENSSFOG00015005808	ncbp3	100	57.481	ENSOANG00000010109	NCBP3	100	56.805	Ornithorhynchus_anatinus
ENSSFOG00015005808	ncbp3	97	56.571	ENSOCUG00000008045	NCBP3	95	56.798	Oryctolagus_cuniculus
ENSSFOG00015005808	ncbp3	98	60.117	ENSORLG00000013703	ncbp3	100	59.366	Oryzias_latipes
ENSSFOG00015005808	ncbp3	98	59.232	ENSORLG00020011764	ncbp3	100	59.856	Oryzias_latipes_hni
ENSSFOG00015005808	ncbp3	98	58.997	ENSORLG00015018733	ncbp3	100	59.483	Oryzias_latipes_hsok
ENSSFOG00015005808	ncbp3	98	59.912	ENSOMEG00000017858	ncbp3	100	58.949	Oryzias_melastigma
ENSSFOG00015005808	ncbp3	98	56.378	ENSOGAG00000008803	NCBP3	100	57.540	Otolemur_garnettii
ENSSFOG00015005808	ncbp3	85	57.143	ENSOARG00000017750	NCBP3	100	57.795	Ovis_aries
ENSSFOG00015005808	ncbp3	98	59.043	ENSPPAG00000030530	NCBP3	100	58.480	Pan_paniscus
ENSSFOG00015005808	ncbp3	98	56.928	ENSPPRG00000022474	NCBP3	100	57.732	Panthera_pardus
ENSSFOG00015005808	ncbp3	90	56.373	ENSPTIG00000009607	NCBP3	92	57.029	Panthera_tigris_altaica
ENSSFOG00015005808	ncbp3	98	58.955	ENSPTRG00000008578	NCBP3	100	58.394	Pan_troglodytes
ENSSFOG00015005808	ncbp3	98	58.533	ENSPANG00000024364	NCBP3	100	58.200	Papio_anubis
ENSSFOG00015005808	ncbp3	96	76.271	ENSPKIG00000008466	ncbp3	100	68.435	Paramormyrops_kingsleyae
ENSSFOG00015005808	ncbp3	85	56.727	ENSPSIG00000013732	NCBP3	99	56.028	Pelodiscus_sinensis
ENSSFOG00015005808	ncbp3	99	54.731	ENSPMGG00000003344	ncbp3	100	54.155	Periophthalmus_magnuspinnatus
ENSSFOG00015005808	ncbp3	98	57.943	ENSPEMG00000007746	Ncbp3	100	57.544	Peromyscus_maniculatus_bairdii
ENSSFOG00015005808	ncbp3	100	57.986	ENSPCIG00000008605	NCBP3	100	57.659	Phascolarctos_cinereus
ENSSFOG00015005808	ncbp3	88	56.355	ENSPFOG00000000721	ncbp3	98	57.496	Poecilia_formosa
ENSSFOG00015005808	ncbp3	98	57.223	ENSPLAG00000015399	ncbp3	100	59.301	Poecilia_latipinna
ENSSFOG00015005808	ncbp3	98	56.844	ENSPMEG00000000896	ncbp3	100	59.181	Poecilia_mexicana
ENSSFOG00015005808	ncbp3	98	56.189	ENSPREG00000001681	ncbp3	100	59.605	Poecilia_reticulata
ENSSFOG00015005808	ncbp3	97	57.744	ENSPPYG00000007823	NCBP3	95	57.658	Pongo_abelii
ENSSFOG00015005808	ncbp3	100	54.361	ENSPCAG00000012614	NCBP3	100	55.470	Procavia_capensis
ENSSFOG00015005808	ncbp3	98	57.335	ENSPCOG00000016793	NCBP3	100	57.687	Propithecus_coquereli
ENSSFOG00015005808	ncbp3	97	51.529	ENSPVAG00000012746	NCBP3	96	53.618	Pteropus_vampyrus
ENSSFOG00015005808	ncbp3	99	55.835	ENSPNYG00000022677	ncbp3	100	55.982	Pundamilia_nyererei
ENSSFOG00015005808	ncbp3	98	65.130	ENSPNAG00000003219	ncbp3	100	66.147	Pygocentrus_nattereri
ENSSFOG00015005808	ncbp3	98	55.962	ENSRNOG00000018550	Ncbp3	100	57.609	Rattus_norvegicus
ENSSFOG00015005808	ncbp3	98	58.084	ENSRBIG00000033247	NCBP3	100	58.200	Rhinopithecus_bieti
ENSSFOG00015005808	ncbp3	98	58.084	ENSRROG00000043833	NCBP3	100	58.200	Rhinopithecus_roxellana
ENSSFOG00015005808	ncbp3	98	57.721	ENSSBOG00000023178	NCBP3	100	57.918	Saimiri_boliviensis_boliviensis
ENSSFOG00015005808	ncbp3	84	59.659	ENSSHAG00000003466	NCBP3	100	59.280	Sarcophilus_harrisii
ENSSFOG00015005808	ncbp3	98	58.739	ENSSMAG00000010917	ncbp3	100	58.509	Scophthalmus_maximus
ENSSFOG00015005808	ncbp3	99	61.514	ENSSDUG00000023402	ncbp3	100	61.270	Seriola_dumerili
ENSSFOG00015005808	ncbp3	99	52.724	ENSSLDG00000000742	ncbp3	100	53.526	Seriola_lalandi_dorsalis
ENSSFOG00015005808	ncbp3	81	71.123	ENSSARG00000006634	NCBP3	86	72.283	Sorex_araneus
ENSSFOG00015005808	ncbp3	100	58.125	ENSSPUG00000002240	NCBP3	100	57.387	Sphenodon_punctatus
ENSSFOG00015005808	ncbp3	99	61.073	ENSSPAG00000011223	ncbp3	100	59.644	Stegastes_partitus
ENSSFOG00015005808	ncbp3	98	56.561	ENSSSCG00000017870	NCBP3	100	57.817	Sus_scrofa
ENSSFOG00015005808	ncbp3	98	58.797	ENSTGUG00000005396	NCBP3	100	58.100	Taeniopygia_guttata
ENSSFOG00015005808	ncbp3	99	58.924	ENSTRUG00000003769	ncbp3	94	74.725	Takifugu_rubripes
ENSSFOG00015005808	ncbp3	99	58.600	ENSTNIG00000004776	ncbp3	100	59.190	Tetraodon_nigroviridis
ENSSFOG00015005808	ncbp3	98	53.481	ENSTBEG00000006308	NCBP3	100	53.323	Tupaia_belangeri
ENSSFOG00015005808	ncbp3	81	73.262	ENSTTRG00000005845	NCBP3	86	75.000	Tursiops_truncatus
ENSSFOG00015005808	ncbp3	98	55.900	ENSUAMG00000014043	NCBP3	100	56.358	Ursus_americanus
ENSSFOG00015005808	ncbp3	93	54.574	ENSUMAG00000007519	NCBP3	98	57.096	Ursus_maritimus
ENSSFOG00015005808	ncbp3	97	58.113	ENSVVUG00000026079	NCBP3	95	58.347	Vulpes_vulpes
ENSSFOG00015005808	ncbp3	100	52.857	ENSXETG00000012965	ncbp3	100	52.794	Xenopus_tropicalis
ENSSFOG00015005808	ncbp3	89	75.532	ENSXCOG00000018393	ncbp3	100	75.532	Xiphophorus_couchianus
ENSSFOG00015005808	ncbp3	98	55.853	ENSXMAG00000006849	ncbp3	100	58.083	Xiphophorus_maculatus