EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005824 (Gene tree)
Gene ID: 108922498
Gene Symbol: eif3ba
Alias: eif3b|eif3s9|im:7152633|wu:fc17c01
Full Name: eukaryotic translation initiation factor 3 subunit B
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 46130 bases
Position: chrKV410816.1:517709-563838
Accession: 108922498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015008951	RRM_1	PF00076.22	2.5e-06	1	1
ENSSFOP00015008923	RRM_1	PF00076.22	2.7e-06	1	1
ENSSFOP00015008951	eIF2A	PF08662.11	1.2e-70	1	1
ENSSFOP00015008923	eIF2A	PF08662.11	1.3e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009048	-	4499	-	ENSSFOP00015008923	718 (aa)	-	-
ENSSFOT00015009076	-	4766	XM_018732681	ENSSFOP00015008951	684 (aa)	XP_018588197	A0A0P7YAR6

Gene Model

Click here to download ENSSFOG00015005824's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005824	eif3ba	99	92.805	ENSSFOG00015006390	eif3bb	99	92.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005824	eif3ba	98	88.806	ENSG00000106263	EIF3B	100	85.621	Homo_sapiens
ENSSFOG00015005824	eif3ba	97	92.157	ENSAPOG00000002297	eif3bb	98	92.157	Acanthochromis_polyacanthus
ENSSFOG00015005824	eif3ba	97	91.554	ENSACIG00000015396	eif3bb	98	91.554	Amphilophus_citrinellus
ENSSFOG00015005824	eif3ba	97	92.157	ENSAOCG00000010921	eif3bb	98	92.157	Amphiprion_ocellaris
ENSSFOG00015005824	eif3ba	97	92.308	ENSAPEG00000000844	eif3bb	98	92.308	Amphiprion_percula
ENSSFOG00015005824	eif3ba	97	92.006	ENSATEG00000008626	eif3bb	98	92.006	Anabas_testudineus
ENSSFOG00015005824	eif3ba	94	89.938	ENSAPLG00000016062	EIF3B	99	89.938	Anas_platyrhynchos
ENSSFOG00015005824	eif3ba	96	89.498	ENSACAG00000008874	-	74	89.498	Anolis_carolinensis
ENSSFOG00015005824	eif3ba	98	88.806	ENSANAG00000020360	EIF3B	82	89.577	Aotus_nancymaae
ENSSFOG00015005824	eif3ba	97	91.704	ENSACLG00000000870	eif3bb	98	91.704	Astatotilapia_calliptera
ENSSFOG00015005824	eif3ba	99	92.059	ENSAMXG00000009773	eif3ba	99	92.059	Astyanax_mexicanus
ENSSFOG00015005824	eif3ba	99	88.000	ENSBTAG00000007474	EIF3B	84	89.275	Bos_taurus
ENSSFOG00015005824	eif3ba	98	33.380	WBGene00001225	eif-3.B	97	33.475	Caenorhabditis_elegans
ENSSFOG00015005824	eif3ba	98	88.657	ENSCJAG00000001442	EIF3B	82	89.426	Callithrix_jacchus
ENSSFOG00015005824	eif3ba	97	88.822	ENSCAFG00000016418	EIF3B	81	88.822	Canis_familiaris
ENSSFOG00015005824	eif3ba	97	85.498	ENSCAFG00020020771	EIF3B	84	85.498	Canis_lupus_dingo
ENSSFOG00015005824	eif3ba	97	88.872	ENSCHIG00000009941	EIF3B	84	89.124	Capra_hircus
ENSSFOG00015005824	eif3ba	97	86.576	ENSTSYG00000008256	EIF3B	98	86.165	Carlito_syrichta
ENSSFOG00015005824	eif3ba	91	79.006	ENSCAPG00000006394	-	99	79.006	Cavia_aperea
ENSSFOG00015005824	eif3ba	95	83.617	ENSCAPG00000009347	-	98	83.617	Cavia_aperea
ENSSFOG00015005824	eif3ba	99	88.123	ENSCPOG00000031410	-	84	89.426	Cavia_porcellus
ENSSFOG00015005824	eif3ba	99	88.270	ENSCPOG00000012541	-	84	89.728	Cavia_porcellus
ENSSFOG00015005824	eif3ba	98	88.806	ENSCCAG00000021556	EIF3B	95	90.017	Cebus_capucinus
ENSSFOG00015005824	eif3ba	98	88.806	ENSCATG00000040107	EIF3B	81	89.577	Cercocebus_atys
ENSSFOG00015005824	eif3ba	98	89.403	ENSCLAG00000006140	EIF3B	84	89.879	Chinchilla_lanigera
ENSSFOG00015005824	eif3ba	98	81.940	ENSCSAG00000017603	EIF3B	81	82.628	Chlorocebus_sabaeus
ENSSFOG00015005824	eif3ba	52	89.394	ENSCHOG00000006142	-	58	89.394	Choloepus_hoffmanni
ENSSFOG00015005824	eif3ba	97	88.956	ENSCPBG00000020654	EIF3B	85	88.956	Chrysemys_picta_bellii
ENSSFOG00015005824	eif3ba	95	61.492	ENSCING00000003620	-	95	60.928	Ciona_intestinalis
ENSSFOG00015005824	eif3ba	98	88.806	ENSCANG00000042097	EIF3B	96	89.577	Colobus_angolensis_palliatus
ENSSFOG00015005824	eif3ba	99	87.722	ENSCGRG00001019278	Eif3b	83	88.956	Cricetulus_griseus_chok1gshd
ENSSFOG00015005824	eif3ba	99	87.722	ENSCGRG00000004618	Eif3b	83	88.956	Cricetulus_griseus_crigri
ENSSFOG00015005824	eif3ba	97	88.989	ENSCSEG00000020931	eif3bb	98	88.989	Cynoglossus_semilaevis
ENSSFOG00015005824	eif3ba	97	91.704	ENSCVAG00000015650	eif3bb	98	91.704	Cyprinodon_variegatus
ENSSFOG00015005824	eif3ba	99	92.206	ENSDARG00000059654	eif3ba	99	92.206	Danio_rerio
ENSSFOG00015005824	eif3ba	98	89.355	ENSDARG00000074213	eif3bb	99	89.442	Danio_rerio
ENSSFOG00015005824	eif3ba	98	87.910	ENSDNOG00000049572	EIF3B	80	88.520	Dasypus_novemcinctus
ENSSFOG00015005824	eif3ba	98	85.052	ENSDORG00000001401	Eif3b	83	85.628	Dipodomys_ordii
ENSSFOG00015005824	eif3ba	96	52.000	FBgn0034237	eIF3b	96	51.857	Drosophila_melanogaster
ENSSFOG00015005824	eif3ba	94	85.670	ENSETEG00000001719	EIF3B	99	85.670	Echinops_telfairi
ENSSFOG00015005824	eif3ba	98	74.256	ENSEBUG00000004379	eif3bb	95	75.841	Eptatretus_burgeri
ENSSFOG00015005824	eif3ba	97	89.173	ENSEASG00005021167	EIF3B	83	89.426	Equus_asinus_asinus
ENSSFOG00015005824	eif3ba	97	89.173	ENSECAG00000013671	EIF3B	83	89.426	Equus_caballus
ENSSFOG00015005824	eif3ba	84	86.034	ENSEEUG00000014359	EIF3B	88	86.034	Erinaceus_europaeus
ENSSFOG00015005824	eif3ba	99	88.484	ENSELUG00000021762	eif3bb	97	89.940	Esox_lucius
ENSSFOG00015005824	eif3ba	97	88.739	ENSFCAG00000005392	EIF3B	82	88.973	Felis_catus
ENSSFOG00015005824	eif3ba	97	89.608	ENSFALG00000013907	EIF3B	92	89.864	Ficedula_albicollis
ENSSFOG00015005824	eif3ba	99	87.977	ENSFDAG00000007558	EIF3B	85	89.577	Fukomys_damarensis
ENSSFOG00015005824	eif3ba	97	92.308	ENSFHEG00000002563	eif3bb	97	92.308	Fundulus_heteroclitus
ENSSFOG00015005824	eif3ba	99	86.490	ENSGMOG00000006100	eif3bb	98	87.275	Gadus_morhua
ENSSFOG00015005824	eif3ba	99	88.462	ENSGALG00000040999	EIF3B	82	89.561	Gallus_gallus
ENSSFOG00015005824	eif3ba	52	94.413	ENSGAFG00000004114	eif3bb	87	94.413	Gambusia_affinis
ENSSFOG00015005824	eif3ba	99	87.482	ENSGACG00000016738	eif3bb	98	88.806	Gasterosteus_aculeatus
ENSSFOG00015005824	eif3ba	97	89.323	ENSGAGG00000003659	EIF3B	82	90.107	Gopherus_agassizii
ENSSFOG00015005824	eif3ba	70	89.234	ENSGGOG00000016291	EIF3B	73	89.234	Gorilla_gorilla
ENSSFOG00015005824	eif3ba	97	91.704	ENSHBUG00000019329	eif3bb	98	91.704	Haplochromis_burtoni
ENSSFOG00015005824	eif3ba	99	87.390	ENSHGLG00000015253	EIF3B	84	88.822	Heterocephalus_glaber_female
ENSSFOG00015005824	eif3ba	99	87.390	ENSHGLG00100015005	EIF3B	85	88.822	Heterocephalus_glaber_male
ENSSFOG00015005824	eif3ba	95	90.417	ENSHCOG00000020583	eif3bb	98	89.624	Hippocampus_comes
ENSSFOG00015005824	eif3ba	99	93.529	ENSIPUG00000018347	eif3b	99	93.529	Ictalurus_punctatus
ENSSFOG00015005824	eif3ba	99	87.537	ENSSTOG00000021545	EIF3B	92	88.973	Ictidomys_tridecemlineatus
ENSSFOG00015005824	eif3ba	98	88.789	ENSJJAG00000014658	Eif3b	84	89.259	Jaculus_jaculus
ENSSFOG00015005824	eif3ba	97	91.704	ENSKMAG00000007432	eif3bb	98	91.704	Kryptolebias_marmoratus
ENSSFOG00015005824	eif3ba	97	90.649	ENSLBEG00000005233	eif3bb	98	90.649	Labrus_bergylta
ENSSFOG00015005824	eif3ba	99	88.987	ENSLACG00000010357	EIF3B	97	90.015	Latimeria_chalumnae
ENSSFOG00015005824	eif3ba	97	94.570	ENSLOCG00000004215	eif3bb	99	93.979	Lepisosteus_oculatus
ENSSFOG00015005824	eif3ba	98	87.630	ENSLAFG00000001540	EIF3B	85	88.386	Loxodonta_africana
ENSSFOG00015005824	eif3ba	98	88.806	ENSMFAG00000046100	EIF3B	85	89.577	Macaca_fascicularis
ENSSFOG00015005824	eif3ba	98	87.870	ENSMMUG00000015529	EIF3B	81	88.623	Macaca_mulatta
ENSSFOG00015005824	eif3ba	98	88.806	ENSMNEG00000042021	EIF3B	81	89.577	Macaca_nemestrina
ENSSFOG00015005824	eif3ba	98	88.806	ENSMLEG00000042295	EIF3B	99	89.577	Mandrillus_leucophaeus
ENSSFOG00015005824	eif3ba	97	92.459	ENSMAMG00000008654	eif3bb	98	92.459	Mastacembelus_armatus
ENSSFOG00015005824	eif3ba	97	91.704	ENSMZEG00005011827	eif3bb	98	91.704	Maylandia_zebra
ENSSFOG00015005824	eif3ba	94	89.938	ENSMGAG00000002719	EIF3B	99	89.938	Meleagris_gallopavo
ENSSFOG00015005824	eif3ba	99	87.722	ENSMAUG00000020259	Eif3b	83	88.956	Mesocricetus_auratus
ENSSFOG00015005824	eif3ba	98	89.104	ENSMICG00000010103	EIF3B	82	89.728	Microcebus_murinus
ENSSFOG00015005824	eif3ba	98	88.191	ENSMOCG00000000390	Eif3b	83	88.805	Microtus_ochrogaster
ENSSFOG00015005824	eif3ba	97	91.554	ENSMMOG00000003655	eif3bb	98	91.554	Mola_mola
ENSSFOG00015005824	eif3ba	97	89.189	ENSMODG00000009778	EIF3B	79	89.561	Monodelphis_domestica
ENSSFOG00015005824	eif3ba	97	84.421	ENSMALG00000002494	eif3bb	98	84.421	Monopterus_albus
ENSSFOG00015005824	eif3ba	98	88.191	MGP_CAROLIEiJ_G0027948	Eif3b	98	84.795	Mus_caroli
ENSSFOG00015005824	eif3ba	98	88.191	ENSMUSG00000056076	Eif3b	98	84.795	Mus_musculus
ENSSFOG00015005824	eif3ba	98	88.191	MGP_PahariEiJ_G0024520	Eif3b	98	84.795	Mus_pahari
ENSSFOG00015005824	eif3ba	98	88.191	MGP_SPRETEiJ_G0028952	Eif3b	98	84.795	Mus_spretus
ENSSFOG00015005824	eif3ba	94	89.319	ENSMPUG00000017919	EIF3B	98	89.319	Mustela_putorius_furo
ENSSFOG00015005824	eif3ba	99	87.888	ENSMLUG00000013740	EIF3B	97	89.426	Myotis_lucifugus
ENSSFOG00015005824	eif3ba	99	87.537	ENSNGAG00000016188	Eif3b	83	88.973	Nannospalax_galili
ENSSFOG00015005824	eif3ba	74	92.000	ENSNBRG00000008582	eif3bb	97	92.000	Neolamprologus_brichardi
ENSSFOG00015005824	eif3ba	98	79.701	ENSNLEG00000008647	EIF3B	82	80.363	Nomascus_leucogenys
ENSSFOG00015005824	eif3ba	74	90.037	ENSMEUG00000000880	EIF3B	70	90.037	Notamacropus_eugenii
ENSSFOG00015005824	eif3ba	94	85.826	ENSOPRG00000014504	EIF3B	99	85.826	Ochotona_princeps
ENSSFOG00015005824	eif3ba	99	79.619	ENSODEG00000012851	EIF3B	83	80.816	Octodon_degus
ENSSFOG00015005824	eif3ba	97	92.157	ENSONIG00000003283	eif3bb	98	92.157	Oreochromis_niloticus
ENSSFOG00015005824	eif3ba	88	89.649	ENSOANG00000004314	EIF3B	99	89.649	Ornithorhynchus_anatinus
ENSSFOG00015005824	eif3ba	98	88.095	ENSOCUG00000010289	EIF3B	98	88.705	Oryctolagus_cuniculus
ENSSFOG00015005824	eif3ba	99	89.265	ENSORLG00000008861	eif3bb	99	89.265	Oryzias_latipes
ENSSFOG00015005824	eif3ba	99	89.265	ENSORLG00020012732	eif3bb	99	89.265	Oryzias_latipes_hni
ENSSFOG00015005824	eif3ba	99	89.118	ENSORLG00015000357	eif3bb	99	89.118	Oryzias_latipes_hsok
ENSSFOG00015005824	eif3ba	97	90.045	ENSOMEG00000017895	eif3bb	98	90.045	Oryzias_melastigma
ENSSFOG00015005824	eif3ba	98	82.815	ENSOGAG00000006319	EIF3B	90	83.358	Otolemur_garnettii
ENSSFOG00015005824	eif3ba	97	82.335	ENSOARG00000005137	EIF3B	94	82.556	Ovis_aries
ENSSFOG00015005824	eif3ba	98	88.806	ENSPPAG00000032833	EIF3B	94	89.577	Pan_paniscus
ENSSFOG00015005824	eif3ba	97	88.973	ENSPPRG00000003071	EIF3B	84	88.973	Panthera_pardus
ENSSFOG00015005824	eif3ba	94	89.319	ENSPTIG00000013328	EIF3B	83	89.319	Panthera_tigris_altaica
ENSSFOG00015005824	eif3ba	98	88.806	ENSPTRG00000018860	EIF3B	85	89.577	Pan_troglodytes
ENSSFOG00015005824	eif3ba	98	88.806	ENSPTRG00000046041	-	85	89.577	Pan_troglodytes
ENSSFOG00015005824	eif3ba	98	88.806	ENSPANG00000014557	EIF3B	85	89.577	Papio_anubis
ENSSFOG00015005824	eif3ba	99	92.364	ENSPKIG00000011735	eif3bb	98	93.072	Paramormyrops_kingsleyae
ENSSFOG00015005824	eif3ba	97	94.428	ENSPKIG00000009981	eif3ba	98	94.599	Paramormyrops_kingsleyae
ENSSFOG00015005824	eif3ba	97	88.502	ENSPSIG00000009889	EIF3B	91	88.502	Pelodiscus_sinensis
ENSSFOG00015005824	eif3ba	98	91.454	ENSPMGG00000016466	eif3bb	98	91.554	Periophthalmus_magnuspinnatus
ENSSFOG00015005824	eif3ba	97	88.705	ENSPEMG00000021554	Eif3b	83	88.956	Peromyscus_maniculatus_bairdii
ENSSFOG00015005824	eif3ba	90	78.049	ENSPMAG00000005331	eif3bb	95	78.268	Petromyzon_marinus
ENSSFOG00015005824	eif3ba	94	89.783	ENSPCIG00000009464	EIF3B	97	89.783	Phascolarctos_cinereus
ENSSFOG00015005824	eif3ba	97	92.609	ENSPFOG00000001449	eif3bb	98	92.609	Poecilia_formosa
ENSSFOG00015005824	eif3ba	97	87.481	ENSPLAG00000005120	eif3bb	97	87.481	Poecilia_latipinna
ENSSFOG00015005824	eif3ba	97	92.609	ENSPMEG00000015157	eif3bb	98	92.609	Poecilia_mexicana
ENSSFOG00015005824	eif3ba	97	92.459	ENSPREG00000006422	eif3bb	98	92.459	Poecilia_reticulata
ENSSFOG00015005824	eif3ba	98	88.756	ENSPPYG00000017313	EIF3B	76	89.530	Pongo_abelii
ENSSFOG00015005824	eif3ba	62	90.722	ENSPCAG00000010455	-	70	90.722	Procavia_capensis
ENSSFOG00015005824	eif3ba	98	88.955	ENSPCOG00000025894	EIF3B	81	89.577	Propithecus_coquereli
ENSSFOG00015005824	eif3ba	94	88.941	ENSPVAG00000013735	EIF3B	92	88.941	Pteropus_vampyrus
ENSSFOG00015005824	eif3ba	97	79.638	ENSPNYG00000014859	eif3bb	97	75.566	Pundamilia_nyererei
ENSSFOG00015005824	eif3ba	99	93.235	ENSPNAG00000021677	eif3ba	99	93.235	Pygocentrus_nattereri
ENSSFOG00015005824	eif3ba	98	88.191	ENSRNOG00000001253	Eif3b	83	88.805	Rattus_norvegicus
ENSSFOG00015005824	eif3ba	99	86.411	ENSRBIG00000030590	EIF3B	94	89.922	Rhinopithecus_bieti
ENSSFOG00015005824	eif3ba	98	88.806	ENSRROG00000035023	EIF3B	85	89.577	Rhinopithecus_roxellana
ENSSFOG00015005824	eif3ba	89	31.501	YOR361C	PRT1	89	31.040	Saccharomyces_cerevisiae
ENSSFOG00015005824	eif3ba	98	88.806	ENSSBOG00000001954	EIF3B	84	89.577	Saimiri_boliviensis_boliviensis
ENSSFOG00015005824	eif3ba	97	88.889	ENSSHAG00000001063	EIF3B	80	89.259	Sarcophilus_harrisii
ENSSFOG00015005824	eif3ba	99	89.412	ENSSMAG00000021264	eif3bb	98	90.649	Scophthalmus_maximus
ENSSFOG00015005824	eif3ba	97	92.308	ENSSDUG00000016761	eif3bb	98	92.308	Seriola_dumerili
ENSSFOG00015005824	eif3ba	97	92.157	ENSSLDG00000022874	eif3bb	98	92.157	Seriola_lalandi_dorsalis
ENSSFOG00015005824	eif3ba	94	89.720	ENSSARG00000006036	EIF3B	99	89.720	Sorex_araneus
ENSSFOG00015005824	eif3ba	94	90.031	ENSSPUG00000001870	EIF3B	99	90.031	Sphenodon_punctatus
ENSSFOG00015005824	eif3ba	97	92.006	ENSSPAG00000013403	eif3bb	98	92.006	Stegastes_partitus
ENSSFOG00015005824	eif3ba	97	89.323	ENSSSCG00000039390	EIF3B	84	89.577	Sus_scrofa
ENSSFOG00015005824	eif3ba	97	88.606	ENSTGUG00000008140	EIF3B	99	88.855	Taeniopygia_guttata
ENSSFOG00015005824	eif3ba	97	91.704	ENSTRUG00000011064	eif3bb	98	91.704	Takifugu_rubripes
ENSSFOG00015005824	eif3ba	98	91.058	ENSTNIG00000004648	eif3bb	99	91.265	Tetraodon_nigroviridis
ENSSFOG00015005824	eif3ba	98	77.877	ENSTBEG00000012836	EIF3B	75	78.452	Tupaia_belangeri
ENSSFOG00015005824	eif3ba	97	79.003	ENSTTRG00000014713	EIF3B	78	79.211	Tursiops_truncatus
ENSSFOG00015005824	eif3ba	97	87.783	ENSUAMG00000000800	EIF3B	99	88.379	Ursus_americanus
ENSSFOG00015005824	eif3ba	97	87.651	ENSUMAG00000007200	EIF3B	99	89.666	Ursus_maritimus
ENSSFOG00015005824	eif3ba	94	89.392	ENSVVUG00000004280	EIF3B	99	89.683	Vulpes_vulpes
ENSSFOG00015005824	eif3ba	96	88.602	ENSXETG00000020593	eif3b	97	88.333	Xenopus_tropicalis
ENSSFOG00015005824	eif3ba	94	91.950	ENSXCOG00000008279	eif3bb	97	91.554	Xiphophorus_couchianus
ENSSFOG00015005824	eif3ba	94	91.796	ENSXMAG00000004705	eif3bb	97	91.403	Xiphophorus_maculatus