EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005861 (Gene tree)
Gene ID: 108919878
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 28653 bases
Position: chrKV411278.1:4083717-4112369
Accession: 108919878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009234	ResIII	PF04851.15	5.3e-07	1	1
ENSSFOP00015009216	ResIII	PF04851.15	9.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009362	-	4095	XM_018728208	ENSSFOP00015009234	1364 (aa)	XP_018583724	-
ENSSFOT00015009344	-	3593	XM_018728209	ENSSFOP00015009216	1197 (aa)	XP_018583725	-

Gene Model

Click here to download ENSSFOG00015005861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005861	si:ch73-63e15.2	80	65.837	ENSSFOG00015019025	sbno1	71	65.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005861	si:ch73-63e15.2	93	66.295	ENSG00000064932	SBNO2	88	66.323	Homo_sapiens
ENSSFOG00015005861	si:ch73-63e15.2	98	82.168	ENSAPOG00000003185	si:ch73-63e15.2	90	79.673	Acanthochromis_polyacanthus
ENSSFOG00015005861	si:ch73-63e15.2	97	83.260	ENSAOCG00000016581	si:ch73-63e15.2	93	82.521	Amphiprion_ocellaris
ENSSFOG00015005861	si:ch73-63e15.2	98	81.802	ENSAPEG00000008862	si:ch73-63e15.2	89	81.802	Amphiprion_percula
ENSSFOG00015005861	si:ch73-63e15.2	99	80.049	ENSATEG00000023838	si:ch73-63e15.2	93	83.388	Anabas_testudineus
ENSSFOG00015005861	si:ch73-63e15.2	95	69.321	ENSAPLG00000007158	SBNO2	91	69.416	Anas_platyrhynchos
ENSSFOG00015005861	si:ch73-63e15.2	93	66.210	ENSANAG00000026685	SBNO2	89	66.067	Aotus_nancymaae
ENSSFOG00015005861	si:ch73-63e15.2	94	80.601	ENSACLG00000005090	si:ch73-63e15.2	87	80.158	Astatotilapia_calliptera
ENSSFOG00015005861	si:ch73-63e15.2	97	76.398	ENSAMXG00000018868	sbno2a	95	79.600	Astyanax_mexicanus
ENSSFOG00015005861	si:ch73-63e15.2	99	77.769	ENSAMXG00000015881	si:ch73-63e15.2	98	69.029	Astyanax_mexicanus
ENSSFOG00015005861	si:ch73-63e15.2	93	67.179	ENSBTAG00000020780	SBNO2	88	66.752	Bos_taurus
ENSSFOG00015005861	si:ch73-63e15.2	92	67.622	ENSCAFG00000019543	SBNO2	82	68.234	Canis_familiaris
ENSSFOG00015005861	si:ch73-63e15.2	92	67.622	ENSCAFG00020017115	SBNO2	87	68.234	Canis_lupus_dingo
ENSSFOG00015005861	si:ch73-63e15.2	92	67.446	ENSCHIG00000026127	SBNO2	86	66.753	Capra_hircus
ENSSFOG00015005861	si:ch73-63e15.2	91	65.991	ENSCAPG00000005731	SBNO2	93	65.463	Cavia_aperea
ENSSFOG00015005861	si:ch73-63e15.2	91	65.792	ENSCPOG00000007477	SBNO2	84	66.487	Cavia_porcellus
ENSSFOG00015005861	si:ch73-63e15.2	94	65.313	ENSCCAG00000037518	SBNO2	90	65.511	Cebus_capucinus
ENSSFOG00015005861	si:ch73-63e15.2	92	67.722	ENSCATG00000037046	SBNO2	88	66.410	Cercocebus_atys
ENSSFOG00015005861	si:ch73-63e15.2	93	67.127	ENSCLAG00000010178	SBNO2	99	66.609	Chinchilla_lanigera
ENSSFOG00015005861	si:ch73-63e15.2	92	67.546	ENSCSAG00000012317	SBNO2	83	66.870	Chlorocebus_sabaeus
ENSSFOG00015005861	si:ch73-63e15.2	93	69.078	ENSCPBG00000008920	SBNO2	92	69.823	Chrysemys_picta_bellii
ENSSFOG00015005861	si:ch73-63e15.2	89	66.637	ENSCANG00000036745	SBNO2	96	66.667	Colobus_angolensis_palliatus
ENSSFOG00015005861	si:ch73-63e15.2	94	64.140	ENSCGRG00001023960	Sbno2	86	63.918	Cricetulus_griseus_chok1gshd
ENSSFOG00015005861	si:ch73-63e15.2	94	65.561	ENSCGRG00000011984	Sbno2	86	65.494	Cricetulus_griseus_crigri
ENSSFOG00015005861	si:ch73-63e15.2	95	77.296	ENSCSEG00000006856	si:ch73-63e15.2	93	82.824	Cynoglossus_semilaevis
ENSSFOG00015005861	si:ch73-63e15.2	95	80.867	ENSCVAG00000005663	si:ch73-63e15.2	79	80.272	Cyprinodon_variegatus
ENSSFOG00015005861	si:ch73-63e15.2	99	76.092	ENSDARG00000098801	sbno2a	84	78.665	Danio_rerio
ENSSFOG00015005861	si:ch73-63e15.2	99	75.820	ENSDARG00000016188	SBNO2	98	67.804	Danio_rerio
ENSSFOG00015005861	si:ch73-63e15.2	92	67.188	ENSDORG00000002916	Sbno2	84	67.158	Dipodomys_ordii
ENSSFOG00015005861	si:ch73-63e15.2	93	66.866	ENSEASG00005021621	SBNO2	89	66.895	Equus_asinus_asinus
ENSSFOG00015005861	si:ch73-63e15.2	93	66.866	ENSECAG00000011827	SBNO2	89	66.895	Equus_caballus
ENSSFOG00015005861	si:ch73-63e15.2	97	81.172	ENSELUG00000020457	si:ch73-63e15.2	97	72.613	Esox_lucius
ENSSFOG00015005861	si:ch73-63e15.2	95	68.891	ENSFALG00000013988	SBNO2	85	69.561	Ficedula_albicollis
ENSSFOG00015005861	si:ch73-63e15.2	91	64.855	ENSFDAG00000015186	SBNO2	86	64.567	Fukomys_damarensis
ENSSFOG00015005861	si:ch73-63e15.2	96	80.772	ENSFHEG00000022262	si:ch73-63e15.2	91	80.034	Fundulus_heteroclitus
ENSSFOG00015005861	si:ch73-63e15.2	92	81.439	ENSGMOG00000007542	si:ch73-63e15.2	95	81.439	Gadus_morhua
ENSSFOG00015005861	si:ch73-63e15.2	97	69.005	ENSGALG00000037522	SBNO2	86	69.340	Gallus_gallus
ENSSFOG00015005861	si:ch73-63e15.2	95	81.463	ENSGAFG00000004860	si:ch73-63e15.2	93	81.037	Gambusia_affinis
ENSSFOG00015005861	si:ch73-63e15.2	92	81.282	ENSGACG00000013190	si:ch73-63e15.2	95	81.104	Gasterosteus_aculeatus
ENSSFOG00015005861	si:ch73-63e15.2	97	69.747	ENSGAGG00000008348	SBNO2	87	70.583	Gopherus_agassizii
ENSSFOG00015005861	si:ch73-63e15.2	94	80.584	ENSHBUG00000010742	si:ch73-63e15.2	92	78.676	Haplochromis_burtoni
ENSSFOG00015005861	si:ch73-63e15.2	91	67.753	ENSHGLG00000008739	SBNO2	83	67.702	Heterocephalus_glaber_female
ENSSFOG00015005861	si:ch73-63e15.2	93	66.838	ENSHGLG00100005269	SBNO2	99	66.266	Heterocephalus_glaber_male
ENSSFOG00015005861	si:ch73-63e15.2	94	79.896	ENSHCOG00000000884	si:ch73-63e15.2	87	79.720	Hippocampus_comes
ENSSFOG00015005861	si:ch73-63e15.2	96	78.231	ENSIPUG00000000537	si:ch73-63e15.2	97	68.410	Ictalurus_punctatus
ENSSFOG00015005861	si:ch73-63e15.2	94	79.740	ENSIPUG00000019672	sbno2	92	80.317	Ictalurus_punctatus
ENSSFOG00015005861	si:ch73-63e15.2	92	67.014	ENSSTOG00000025832	SBNO2	84	67.216	Ictidomys_tridecemlineatus
ENSSFOG00015005861	si:ch73-63e15.2	92	63.858	ENSJJAG00000017397	Sbno2	85	63.802	Jaculus_jaculus
ENSSFOG00015005861	si:ch73-63e15.2	94	80.838	ENSKMAG00000005541	si:ch73-63e15.2	78	80.822	Kryptolebias_marmoratus
ENSSFOG00015005861	si:ch73-63e15.2	50	77.484	ENSLBEG00000005937	-	97	77.778	Labrus_bergylta
ENSSFOG00015005861	si:ch73-63e15.2	96	81.448	ENSLBEG00000025016	si:ch73-63e15.2	95	82.553	Labrus_bergylta
ENSSFOG00015005861	si:ch73-63e15.2	50	69.608	ENSLACG00000012598	SBNO2	100	68.679	Latimeria_chalumnae
ENSSFOG00015005861	si:ch73-63e15.2	96	81.970	ENSLOCG00000004643	si:ch73-63e15.2	99	72.348	Lepisosteus_oculatus
ENSSFOG00015005861	si:ch73-63e15.2	90	64.769	ENSLAFG00000008824	SBNO2	88	64.464	Loxodonta_africana
ENSSFOG00015005861	si:ch73-63e15.2	94	64.805	ENSMFAG00000040030	SBNO2	91	65.000	Macaca_fascicularis
ENSSFOG00015005861	si:ch73-63e15.2	92	67.634	ENSMMUG00000010886	SBNO2	87	65.941	Macaca_mulatta
ENSSFOG00015005861	si:ch73-63e15.2	95	65.966	ENSMNEG00000039927	SBNO2	90	65.796	Macaca_nemestrina
ENSSFOG00015005861	si:ch73-63e15.2	84	68.714	ENSMLEG00000038556	SBNO2	89	67.966	Mandrillus_leucophaeus
ENSSFOG00015005861	si:ch73-63e15.2	96	82.293	ENSMAMG00000018758	si:ch73-63e15.2	77	82.293	Mastacembelus_armatus
ENSSFOG00015005861	si:ch73-63e15.2	94	80.584	ENSMZEG00005010682	si:ch73-63e15.2	87	80.158	Maylandia_zebra
ENSSFOG00015005861	si:ch73-63e15.2	93	70.723	ENSMGAG00000003801	SBNO2	90	70.213	Meleagris_gallopavo
ENSSFOG00015005861	si:ch73-63e15.2	94	65.816	ENSMAUG00000008034	Sbno2	86	65.979	Mesocricetus_auratus
ENSSFOG00015005861	si:ch73-63e15.2	93	66.267	ENSMICG00000013071	SBNO2	88	66.039	Microcebus_murinus
ENSSFOG00015005861	si:ch73-63e15.2	92	66.957	ENSMOCG00000010504	Sbno2	84	66.989	Microtus_ochrogaster
ENSSFOG00015005861	si:ch73-63e15.2	98	67.649	ENSMODG00000005382	SBNO2	82	69.991	Monodelphis_domestica
ENSSFOG00015005861	si:ch73-63e15.2	76	76.175	ENSMALG00000021831	si:ch73-63e15.2	96	79.075	Monopterus_albus
ENSSFOG00015005861	si:ch73-63e15.2	92	66.203	ENSMUSG00000035673	Sbno2	93	65.595	Mus_musculus
ENSSFOG00015005861	si:ch73-63e15.2	92	66.000	MGP_PahariEiJ_G0030976	Sbno2	84	66.169	Mus_pahari
ENSSFOG00015005861	si:ch73-63e15.2	92	66.464	MGP_SPRETEiJ_G0016381	Sbno2	90	66.637	Mus_spretus
ENSSFOG00015005861	si:ch73-63e15.2	79	69.798	ENSMPUG00000008747	SBNO2	91	69.293	Mustela_putorius_furo
ENSSFOG00015005861	si:ch73-63e15.2	94	63.929	ENSNGAG00000004308	Sbno2	87	64.650	Nannospalax_galili
ENSSFOG00015005861	si:ch73-63e15.2	89	82.310	ENSNBRG00000022968	si:ch73-63e15.2	93	84.856	Neolamprologus_brichardi
ENSSFOG00015005861	si:ch73-63e15.2	87	67.213	ENSNLEG00000001305	SBNO2	87	67.213	Nomascus_leucogenys
ENSSFOG00015005861	si:ch73-63e15.2	71	76.696	ENSMEUG00000013511	-	72	76.522	Notamacropus_eugenii
ENSSFOG00015005861	si:ch73-63e15.2	90	67.325	ENSOPRG00000017238	SBNO2	91	68.211	Ochotona_princeps
ENSSFOG00015005861	si:ch73-63e15.2	91	66.345	ENSODEG00000011822	SBNO2	85	65.677	Octodon_degus
ENSSFOG00015005861	si:ch73-63e15.2	95	80.494	ENSONIG00000002490	si:ch73-63e15.2	98	74.901	Oreochromis_niloticus
ENSSFOG00015005861	si:ch73-63e15.2	93	81.163	ENSORLG00000000913	si:ch73-63e15.2	90	81.071	Oryzias_latipes
ENSSFOG00015005861	si:ch73-63e15.2	93	81.076	ENSORLG00020010978	si:ch73-63e15.2	90	79.685	Oryzias_latipes_hni
ENSSFOG00015005861	si:ch73-63e15.2	93	81.337	ENSORLG00015000202	si:ch73-63e15.2	90	81.161	Oryzias_latipes_hsok
ENSSFOG00015005861	si:ch73-63e15.2	95	79.745	ENSOMEG00000000359	si:ch73-63e15.2	86	80.157	Oryzias_melastigma
ENSSFOG00015005861	si:ch73-63e15.2	92	64.965	ENSOARG00000011130	SBNO2	86	64.645	Ovis_aries
ENSSFOG00015005861	si:ch73-63e15.2	92	66.579	ENSPPAG00000032482	SBNO2	91	65.506	Pan_paniscus
ENSSFOG00015005861	si:ch73-63e15.2	95	65.601	ENSPTRG00000010185	SBNO2	90	65.628	Pan_troglodytes
ENSSFOG00015005861	si:ch73-63e15.2	93	63.248	ENSPANG00000009658	SBNO2	88	63.068	Papio_anubis
ENSSFOG00015005861	si:ch73-63e15.2	84	79.243	ENSPKIG00000009707	-	84	79.592	Paramormyrops_kingsleyae
ENSSFOG00015005861	si:ch73-63e15.2	100	80.816	ENSPKIG00000024201	si:ch73-63e15.2	98	74.304	Paramormyrops_kingsleyae
ENSSFOG00015005861	si:ch73-63e15.2	78	71.862	ENSPSIG00000002852	SBNO2	99	71.224	Pelodiscus_sinensis
ENSSFOG00015005861	si:ch73-63e15.2	97	75.851	ENSPMGG00000014375	si:ch73-63e15.2	88	80.948	Periophthalmus_magnuspinnatus
ENSSFOG00015005861	si:ch73-63e15.2	92	65.767	ENSPEMG00000024122	Sbno2	84	65.633	Peromyscus_maniculatus_bairdii
ENSSFOG00015005861	si:ch73-63e15.2	90	71.326	ENSPCIG00000011264	SBNO2	82	70.123	Phascolarctos_cinereus
ENSSFOG00015005861	si:ch73-63e15.2	97	79.851	ENSPFOG00000004096	si:ch73-63e15.2	98	81.200	Poecilia_formosa
ENSSFOG00015005861	si:ch73-63e15.2	99	79.673	ENSPLAG00000014653	si:ch73-63e15.2	79	81.134	Poecilia_latipinna
ENSSFOG00015005861	si:ch73-63e15.2	99	79.510	ENSPMEG00000002129	si:ch73-63e15.2	90	83.135	Poecilia_mexicana
ENSSFOG00015005861	si:ch73-63e15.2	94	81.857	ENSPREG00000006755	si:ch73-63e15.2	73	81.427	Poecilia_reticulata
ENSSFOG00015005861	si:ch73-63e15.2	84	68.112	ENSPCAG00000012256	SBNO2	77	67.950	Procavia_capensis
ENSSFOG00015005861	si:ch73-63e15.2	93	60.343	ENSPCOG00000015216	SBNO2	88	59.777	Propithecus_coquereli
ENSSFOG00015005861	si:ch73-63e15.2	96	80.304	ENSPNYG00000019926	si:ch73-63e15.2	92	78.676	Pundamilia_nyererei
ENSSFOG00015005861	si:ch73-63e15.2	100	75.921	ENSPNAG00000026609	sbno2a	90	75.628	Pygocentrus_nattereri
ENSSFOG00015005861	si:ch73-63e15.2	99	78.454	ENSPNAG00000020260	si:ch73-63e15.2	98	68.701	Pygocentrus_nattereri
ENSSFOG00015005861	si:ch73-63e15.2	92	66.406	ENSRNOG00000013987	Sbno2	89	65.803	Rattus_norvegicus
ENSSFOG00015005861	si:ch73-63e15.2	86	66.262	ENSRBIG00000009740	SBNO2	87	66.262	Rhinopithecus_bieti
ENSSFOG00015005861	si:ch73-63e15.2	82	69.675	ENSRROG00000044671	SBNO2	86	69.073	Rhinopithecus_roxellana
ENSSFOG00015005861	si:ch73-63e15.2	92	66.843	ENSSBOG00000023562	SBNO2	89	65.841	Saimiri_boliviensis_boliviensis
ENSSFOG00015005861	si:ch73-63e15.2	90	70.079	ENSSHAG00000010241	SBNO2	97	70.651	Sarcophilus_harrisii
ENSSFOG00015005861	si:ch73-63e15.2	96	81.719	ENSSMAG00000012489	si:ch73-63e15.2	90	80.308	Scophthalmus_maximus
ENSSFOG00015005861	si:ch73-63e15.2	96	82.293	ENSSDUG00000003527	si:ch73-63e15.2	90	80.805	Seriola_dumerili
ENSSFOG00015005861	si:ch73-63e15.2	96	81.522	ENSSLDG00000004623	si:ch73-63e15.2	90	80.446	Seriola_lalandi_dorsalis
ENSSFOG00015005861	si:ch73-63e15.2	95	83.106	ENSSPAG00000017717	si:ch73-63e15.2	90	83.156	Stegastes_partitus
ENSSFOG00015005861	si:ch73-63e15.2	93	66.895	ENSSSCG00000030042	SBNO2	90	66.296	Sus_scrofa
ENSSFOG00015005861	si:ch73-63e15.2	90	81.166	ENSTRUG00000018193	si:ch73-63e15.2	86	82.396	Takifugu_rubripes
ENSSFOG00015005861	si:ch73-63e15.2	84	68.277	ENSUAMG00000006568	SBNO2	93	71.478	Ursus_americanus
ENSSFOG00015005861	si:ch73-63e15.2	92	67.504	ENSVVUG00000022823	SBNO2	81	68.234	Vulpes_vulpes
ENSSFOG00015005861	si:ch73-63e15.2	85	74.498	ENSXETG00000021579	sbno2	90	74.797	Xenopus_tropicalis
ENSSFOG00015005861	si:ch73-63e15.2	81	81.290	ENSXCOG00000009209	si:ch73-63e15.2	89	84.746	Xiphophorus_couchianus
ENSSFOG00015005861	si:ch73-63e15.2	95	81.595	ENSXMAG00000012091	si:ch73-63e15.2	91	80.069	Xiphophorus_maculatus