EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015005913 (Gene tree)
Gene ID: 108929933
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D0-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 15992 bases
Position: chrKV410906.1:913759-929750
Accession: 108929933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009099	CBFNT	PF08143.11	4.1e-06	1	1
ENSSFOP00015009080	CBFNT	PF08143.11	4.1e-06	1	1
ENSSFOP00015009080	RRM_1	PF00076.22	1.5e-35	1	2
ENSSFOP00015009080	RRM_1	PF00076.22	1.5e-35	2	2
ENSSFOP00015009099	RRM_1	PF00076.22	1.5e-35	1	2
ENSSFOP00015009099	RRM_1	PF00076.22	1.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009206	-	4093	XM_018744847	ENSSFOP00015009080	312 (aa)	XP_018600363	A0A1W4Z9D9
ENSSFOT00015009224	-	3980	XM_018744852	ENSSFOP00015009099	308 (aa)	XP_018600368	A0A1W4ZHY1

Gene Model

Click here to download ENSSFOG00015005913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015005913	hnrnpd	88	66.667	ENSSFOG00015022519	hnrnpabb	85	64.452
ENSSFOG00015005913	hnrnpd	61	43.434	ENSSFOG00015001814	hnrnpa3	58	43.128
ENSSFOG00015005913	hnrnpd	61	46.875	ENSSFOG00015021687	-	62	46.875
ENSSFOG00015005913	hnrnpd	81	34.256	ENSSFOG00015020338	dazap1	58	36.134
ENSSFOG00015005913	hnrnpd	91	68.641	ENSSFOG00015015634	hnrnpaba	96	66.327
ENSSFOG00015005913	hnrnpd	96	64.935	ENSSFOG00015005893	hnrnpdl	95	64.664
ENSSFOG00015005913	hnrnpd	54	36.994	ENSSFOG00015002650	HNRNPA0	57	36.788
ENSSFOG00015005913	hnrnpd	52	34.568	ENSSFOG00015008512	tardbp	50	34.568
ENSSFOG00015005913	hnrnpd	58	36.364	ENSSFOG00015014029	tardbpl	60	35.220
ENSSFOG00015005913	hnrnpd	73	47.619	ENSSFOG00015005350	MSI1	56	48.503
ENSSFOG00015005913	hnrnpd	53	34.568	ENSSFOG00015011165	slirp	84	34.568
ENSSFOG00015005913	hnrnpd	65	38.537	ENSSFOG00015007588	-	73	33.585
ENSSFOG00015005913	hnrnpd	64	37.931	ENSSFOG00015016280	hnrnpa1	64	37.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005913	hnrnpd	89	85.000	ENSG00000138668	HNRNPD	100	90.991	Homo_sapiens
ENSSFOG00015005913	hnrnpd	100	82.965	ENSAPOG00000006184	hnrnpd	100	86.120	Acanthochromis_polyacanthus
ENSSFOG00015005913	hnrnpd	90	79.139	ENSAMEG00000005158	HNRNPD	95	81.699	Ailuropoda_melanoleuca
ENSSFOG00015005913	hnrnpd	83	85.000	ENSACIG00000008353	hnrnpd	86	85.338	Amphilophus_citrinellus
ENSSFOG00015005913	hnrnpd	100	83.281	ENSAOCG00000014191	hnrnpd	100	86.435	Amphiprion_ocellaris
ENSSFOG00015005913	hnrnpd	100	82.965	ENSAPEG00000005603	hnrnpd	100	86.120	Amphiprion_percula
ENSSFOG00015005913	hnrnpd	100	82.019	ENSATEG00000007097	hnrnpd	100	85.174	Anabas_testudineus
ENSSFOG00015005913	hnrnpd	89	86.538	ENSACAG00000010342	HNRNPD	100	86.923	Anolis_carolinensis
ENSSFOG00015005913	hnrnpd	90	84.806	ENSANAG00000035221	HNRNPD	85	87.456	Aotus_nancymaae
ENSSFOG00015005913	hnrnpd	89	92.278	ENSACLG00000026497	hnrnpd	100	92.278	Astatotilapia_calliptera
ENSSFOG00015005913	hnrnpd	100	85.759	ENSACLG00000025213	hnrnpd	100	85.759	Astatotilapia_calliptera
ENSSFOG00015005913	hnrnpd	100	87.500	ENSAMXG00000001477	hnrnpd	100	88.141	Astyanax_mexicanus
ENSSFOG00015005913	hnrnpd	89	79.599	ENSBTAG00000013952	HNRNPD	85	81.699	Bos_taurus
ENSSFOG00015005913	hnrnpd	89	85.000	ENSCJAG00000015165	HNRNPD	83	88.339	Callithrix_jacchus
ENSSFOG00015005913	hnrnpd	89	79.599	ENSCAFG00000025045	HNRNPD	86	81.759	Canis_familiaris
ENSSFOG00015005913	hnrnpd	89	79.599	ENSCAFG00020010713	HNRNPD	86	81.759	Canis_lupus_dingo
ENSSFOG00015005913	hnrnpd	89	85.000	ENSCHIG00000022317	HNRNPD	85	87.108	Capra_hircus
ENSSFOG00015005913	hnrnpd	89	80.000	ENSTSYG00000010395	HNRNPD	100	88.293	Carlito_syrichta
ENSSFOG00015005913	hnrnpd	89	77.481	ENSCPOG00000040484	HNRNPD	77	81.298	Cavia_porcellus
ENSSFOG00015005913	hnrnpd	64	61.421	ENSCCAG00000021563	-	81	61.538	Cebus_capucinus
ENSSFOG00015005913	hnrnpd	89	85.000	ENSCCAG00000024528	HNRNPD	83	88.339	Cebus_capucinus
ENSSFOG00015005913	hnrnpd	89	85.000	ENSCATG00000039829	HNRNPD	83	88.339	Cercocebus_atys
ENSSFOG00015005913	hnrnpd	89	85.199	ENSCLAG00000006540	HNRNPD	91	88.809	Chinchilla_lanigera
ENSSFOG00015005913	hnrnpd	89	79.599	ENSCSAG00000004463	HNRNPD	84	82.781	Chlorocebus_sabaeus
ENSSFOG00015005913	hnrnpd	89	79.336	ENSCHOG00000000045	HNRNPD	98	85.609	Choloepus_hoffmanni
ENSSFOG00015005913	hnrnpd	87	83.150	ENSCPBG00000008025	HNRNPD	84	88.256	Chrysemys_picta_bellii
ENSSFOG00015005913	hnrnpd	89	85.357	ENSCANG00000018501	HNRNPD	83	88.693	Colobus_angolensis_palliatus
ENSSFOG00015005913	hnrnpd	89	84.643	ENSCGRG00001014634	Hnrnpd	85	87.108	Cricetulus_griseus_chok1gshd
ENSSFOG00015005913	hnrnpd	89	82.288	ENSCGRG00000007563	Hnrnpd	96	85.662	Cricetulus_griseus_crigri
ENSSFOG00015005913	hnrnpd	100	82.390	ENSCSEG00000010909	hnrnpd	100	77.987	Cynoglossus_semilaevis
ENSSFOG00015005913	hnrnpd	100	82.650	ENSCVAG00000019790	hnrnpd	100	82.650	Cyprinodon_variegatus
ENSSFOG00015005913	hnrnpd	100	87.261	ENSDARG00000059246	hnrnpd	100	87.261	Danio_rerio
ENSSFOG00015005913	hnrnpd	89	79.705	ENSDNOG00000013830	-	76	85.978	Dasypus_novemcinctus
ENSSFOG00015005913	hnrnpd	59	74.432	ENSDNOG00000041055	-	69	74.432	Dasypus_novemcinctus
ENSSFOG00015005913	hnrnpd	73	73.214	ENSDNOG00000045079	-	74	71.429	Dasypus_novemcinctus
ENSSFOG00015005913	hnrnpd	89	84.643	ENSDORG00000012507	Hnrnpd	96	87.986	Dipodomys_ordii
ENSSFOG00015005913	hnrnpd	87	79.795	ENSETEG00000016709	HNRNPD	85	82.026	Echinops_telfairi
ENSSFOG00015005913	hnrnpd	89	85.000	ENSEASG00005016278	HNRNPD	85	87.456	Equus_asinus_asinus
ENSSFOG00015005913	hnrnpd	89	79.599	ENSECAG00000009344	HNRNPD	86	81.759	Equus_caballus
ENSSFOG00015005913	hnrnpd	90	71.523	ENSEEUG00000007552	HNRNPD	85	72.222	Erinaceus_europaeus
ENSSFOG00015005913	hnrnpd	79	82.000	ENSELUG00000003230	hnrnpd	87	82.239	Esox_lucius
ENSSFOG00015005913	hnrnpd	89	85.000	ENSFCAG00000027404	HNRNPD	86	81.759	Felis_catus
ENSSFOG00015005913	hnrnpd	88	85.199	ENSFALG00000005716	HNRNPD	85	87.589	Ficedula_albicollis
ENSSFOG00015005913	hnrnpd	89	82.288	ENSFDAG00000007958	HNRNPD	81	86.029	Fukomys_damarensis
ENSSFOG00015005913	hnrnpd	100	79.811	ENSFHEG00000006838	hnrnpd	100	82.965	Fundulus_heteroclitus
ENSSFOG00015005913	hnrnpd	100	75.938	ENSGMOG00000018481	hnrnpd	100	77.500	Gadus_morhua
ENSSFOG00015005913	hnrnpd	93	81.154	ENSGALG00000011184	HNRNPD	100	87.692	Gallus_gallus
ENSSFOG00015005913	hnrnpd	100	79.688	ENSGAFG00000003714	hnrnpd	100	76.562	Gambusia_affinis
ENSSFOG00015005913	hnrnpd	100	75.851	ENSGACG00000015669	hnrnpd	100	78.638	Gasterosteus_aculeatus
ENSSFOG00015005913	hnrnpd	87	79.452	ENSGAGG00000003656	HNRNPD	87	82.667	Gopherus_agassizii
ENSSFOG00015005913	hnrnpd	93	84.674	ENSGGOG00000026760	HNRNPD	94	88.506	Gorilla_gorilla
ENSSFOG00015005913	hnrnpd	100	85.759	ENSHBUG00000011794	hnrnpd	100	85.759	Haplochromis_burtoni
ENSSFOG00015005913	hnrnpd	90	84.452	ENSHGLG00000004214	HNRNPD	87	86.007	Heterocephalus_glaber_female
ENSSFOG00015005913	hnrnpd	93	81.992	ENSHGLG00100005996	HNRNPD	100	88.846	Heterocephalus_glaber_male
ENSSFOG00015005913	hnrnpd	100	76.415	ENSHCOG00000000087	hnrnpd	97	78.302	Hippocampus_comes
ENSSFOG00015005913	hnrnpd	97	82.295	ENSIPUG00000024954	hnrnpd	98	87.171	Ictalurus_punctatus
ENSSFOG00015005913	hnrnpd	89	84.946	ENSSTOG00000013970	HNRNPD	85	87.153	Ictidomys_tridecemlineatus
ENSSFOG00015005913	hnrnpd	89	85.000	ENSJJAG00000023387	Hnrnpd	96	87.108	Jaculus_jaculus
ENSSFOG00015005913	hnrnpd	100	79.114	ENSKMAG00000004310	hnrnpd	100	82.278	Kryptolebias_marmoratus
ENSSFOG00015005913	hnrnpd	97	86.645	ENSLBEG00000027508	hnrnpd	97	86.645	Labrus_bergylta
ENSSFOG00015005913	hnrnpd	100	81.470	ENSLACG00000005306	HNRNPD	100	82.428	Latimeria_chalumnae
ENSSFOG00015005913	hnrnpd	100	88.498	ENSLOCG00000010743	hnrnpd	100	87.859	Lepisosteus_oculatus
ENSSFOG00015005913	hnrnpd	89	79.705	ENSLAFG00000016483	HNRNPD	98	85.662	Loxodonta_africana
ENSSFOG00015005913	hnrnpd	89	85.000	ENSMFAG00000031674	HNRNPD	83	88.339	Macaca_fascicularis
ENSSFOG00015005913	hnrnpd	89	85.000	ENSMNEG00000028199	HNRNPD	83	88.339	Macaca_nemestrina
ENSSFOG00015005913	hnrnpd	89	85.000	ENSMLEG00000028370	HNRNPD	83	88.339	Mandrillus_leucophaeus
ENSSFOG00015005913	hnrnpd	100	84.810	ENSMAMG00000004971	hnrnpd	100	84.810	Mastacembelus_armatus
ENSSFOG00015005913	hnrnpd	100	85.759	ENSMZEG00005007558	hnrnpd	100	85.759	Maylandia_zebra
ENSSFOG00015005913	hnrnpd	93	81.226	ENSMGAG00000008051	HNRNPD	100	87.739	Meleagris_gallopavo
ENSSFOG00015005913	hnrnpd	89	84.643	ENSMAUG00000008830	Hnrnpd	85	87.108	Mesocricetus_auratus
ENSSFOG00015005913	hnrnpd	87	82.784	ENSMICG00000010984	HNRNPD	88	88.339	Microcebus_murinus
ENSSFOG00015005913	hnrnpd	90	84.099	ENSMOCG00000021398	Hnrnpd	85	86.760	Microtus_ochrogaster
ENSSFOG00015005913	hnrnpd	100	80.757	ENSMMOG00000008627	hnrnpd	100	80.126	Mola_mola
ENSSFOG00015005913	hnrnpd	89	79.264	ENSMODG00000011898	HNRNPD	79	82.609	Monodelphis_domestica
ENSSFOG00015005913	hnrnpd	97	81.494	ENSMALG00000016024	hnrnpd	97	84.740	Monopterus_albus
ENSSFOG00015005913	hnrnpd	89	84.643	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	96.000	Mus_caroli
ENSSFOG00015005913	hnrnpd	89	84.643	ENSMUSG00000000568	Hnrnpd	100	96.000	Mus_musculus
ENSSFOG00015005913	hnrnpd	89	84.643	MGP_PahariEiJ_G0017224	Hnrnpd	100	96.000	Mus_pahari
ENSSFOG00015005913	hnrnpd	89	84.643	MGP_SPRETEiJ_G0028443	Hnrnpd	100	96.000	Mus_spretus
ENSSFOG00015005913	hnrnpd	89	79.705	ENSMPUG00000014782	HNRNPD	98	85.978	Mustela_putorius_furo
ENSSFOG00015005913	hnrnpd	89	70.569	ENSMLUG00000010628	HNRNPD	86	75.163	Myotis_lucifugus
ENSSFOG00015005913	hnrnpd	89	84.643	ENSNGAG00000013451	Hnrnpd	86	87.108	Nannospalax_galili
ENSSFOG00015005913	hnrnpd	100	86.076	ENSNBRG00000019548	hnrnpd	100	86.076	Neolamprologus_brichardi
ENSSFOG00015005913	hnrnpd	89	85.091	ENSNLEG00000008600	HNRNPD	84	88.727	Nomascus_leucogenys
ENSSFOG00015005913	hnrnpd	69	77.576	ENSMEUG00000006804	-	58	88.485	Notamacropus_eugenii
ENSSFOG00015005913	hnrnpd	89	79.195	ENSOPRG00000009336	HNRNPD	85	79.672	Ochotona_princeps
ENSSFOG00015005913	hnrnpd	89	84.643	ENSODEG00000001897	HNRNPD	92	85.666	Octodon_degus
ENSSFOG00015005913	hnrnpd	100	85.759	ENSONIG00000015390	hnrnpd	100	85.759	Oreochromis_niloticus
ENSSFOG00015005913	hnrnpd	89	82.308	ENSOANG00000001932	HNRNPD	100	88.846	Ornithorhynchus_anatinus
ENSSFOG00015005913	hnrnpd	89	79.705	ENSOCUG00000001357	HNRNPD	98	85.662	Oryctolagus_cuniculus
ENSSFOG00015005913	hnrnpd	100	77.918	ENSORLG00000001833	hnrnpd	100	80.757	Oryzias_latipes
ENSSFOG00015005913	hnrnpd	99	72.036	ENSORLG00020014780	hnrnpd	93	76.292	Oryzias_latipes_hni
ENSSFOG00015005913	hnrnpd	100	77.918	ENSORLG00015002382	hnrnpd	100	80.757	Oryzias_latipes_hsok
ENSSFOG00015005913	hnrnpd	100	79.233	ENSOMEG00000018558	hnrnpd	100	82.428	Oryzias_melastigma
ENSSFOG00015005913	hnrnpd	89	79.599	ENSOGAG00000004075	HNRNPD	84	82.781	Otolemur_garnettii
ENSSFOG00015005913	hnrnpd	89	79.705	ENSOARG00000000579	HNRNPD	98	85.978	Ovis_aries
ENSSFOG00015005913	hnrnpd	90	84.806	ENSPPAG00000035750	HNRNPD	100	88.293	Pan_paniscus
ENSSFOG00015005913	hnrnpd	89	85.000	ENSPPRG00000012258	HNRNPD	85	87.456	Panthera_pardus
ENSSFOG00015005913	hnrnpd	90	84.806	ENSPTIG00000019434	HNRNPD	99	87.456	Panthera_tigris_altaica
ENSSFOG00015005913	hnrnpd	89	85.000	ENSPTRG00000016215	HNRNPD	83	88.339	Pan_troglodytes
ENSSFOG00015005913	hnrnpd	89	85.000	ENSPANG00000011785	HNRNPD	83	88.339	Papio_anubis
ENSSFOG00015005913	hnrnpd	100	93.590	ENSPKIG00000025512	hnrnpd	100	93.269	Paramormyrops_kingsleyae
ENSSFOG00015005913	hnrnpd	77	86.893	ENSPSIG00000017029	HNRNPD	82	89.904	Pelodiscus_sinensis
ENSSFOG00015005913	hnrnpd	88	74.558	ENSPMGG00000017169	hnrnpd	85	79.762	Periophthalmus_magnuspinnatus
ENSSFOG00015005913	hnrnpd	87	82.288	ENSPEMG00000014804	Hnrnpd	85	85.662	Peromyscus_maniculatus_bairdii
ENSSFOG00015005913	hnrnpd	89	84.588	ENSPCIG00000003112	HNRNPD	78	88.172	Phascolarctos_cinereus
ENSSFOG00015005913	hnrnpd	100	79.495	ENSPFOG00000002596	hnrnpd	100	82.650	Poecilia_formosa
ENSSFOG00015005913	hnrnpd	100	79.495	ENSPLAG00000004297	hnrnpd	100	82.650	Poecilia_latipinna
ENSSFOG00015005913	hnrnpd	100	79.495	ENSPMEG00000000152	hnrnpd	100	82.650	Poecilia_mexicana
ENSSFOG00015005913	hnrnpd	93	89.615	ENSPREG00000018081	hnrnpd	98	89.615	Poecilia_reticulata
ENSSFOG00015005913	hnrnpd	63	74.803	ENSPPYG00000020411	-	90	71.233	Pongo_abelii
ENSSFOG00015005913	hnrnpd	89	79.599	ENSPPYG00000014885	HNRNPD	84	82.781	Pongo_abelii
ENSSFOG00015005913	hnrnpd	89	76.000	ENSPCAG00000002182	HNRNPD	85	81.518	Procavia_capensis
ENSSFOG00015005913	hnrnpd	89	85.000	ENSPCOG00000021331	HNRNPD	85	87.456	Propithecus_coquereli
ENSSFOG00015005913	hnrnpd	89	78.930	ENSPVAG00000000003	HNRNPD	85	82.353	Pteropus_vampyrus
ENSSFOG00015005913	hnrnpd	100	85.759	ENSPNYG00000004884	hnrnpd	100	85.759	Pundamilia_nyererei
ENSSFOG00015005913	hnrnpd	100	89.610	ENSPNAG00000016368	hnrnpd	100	89.286	Pygocentrus_nattereri
ENSSFOG00015005913	hnrnpd	90	83.039	ENSRNOG00000002292	Hnrnpd	84	86.572	Rattus_norvegicus
ENSSFOG00015005913	hnrnpd	89	85.000	ENSRBIG00000035345	HNRNPD	83	88.339	Rhinopithecus_bieti
ENSSFOG00015005913	hnrnpd	89	85.000	ENSRROG00000011888	HNRNPD	83	88.339	Rhinopithecus_roxellana
ENSSFOG00015005913	hnrnpd	89	85.000	ENSSBOG00000032881	HNRNPD	83	88.339	Saimiri_boliviensis_boliviensis
ENSSFOG00015005913	hnrnpd	89	79.705	ENSSHAG00000013312	HNRNPD	98	85.978	Sarcophilus_harrisii
ENSSFOG00015005913	hnrnpd	100	78.931	ENSSMAG00000009686	hnrnpd	100	83.019	Scophthalmus_maximus
ENSSFOG00015005913	hnrnpd	100	83.912	ENSSDUG00000010792	hnrnpd	100	84.227	Seriola_dumerili
ENSSFOG00015005913	hnrnpd	100	76.899	ENSSLDG00000015962	hnrnpd	100	82.965	Seriola_lalandi_dorsalis
ENSSFOG00015005913	hnrnpd	89	77.860	ENSSARG00000006883	HNRNPD	98	84.133	Sorex_araneus
ENSSFOG00015005913	hnrnpd	93	85.385	ENSSPUG00000013677	HNRNPD	100	85.769	Sphenodon_punctatus
ENSSFOG00015005913	hnrnpd	100	82.650	ENSSPAG00000021014	hnrnpd	100	85.804	Stegastes_partitus
ENSSFOG00015005913	hnrnpd	89	85.000	ENSSSCG00000009249	HNRNPD	85	87.456	Sus_scrofa
ENSSFOG00015005913	hnrnpd	87	81.507	ENSTGUG00000002858	HNRNPD	96	78.549	Taeniopygia_guttata
ENSSFOG00015005913	hnrnpd	97	80.130	ENSTRUG00000018450	hnrnpd	100	76.899	Takifugu_rubripes
ENSSFOG00015005913	hnrnpd	74	81.498	ENSTNIG00000013499	hnrnpd	88	87.981	Tetraodon_nigroviridis
ENSSFOG00015005913	hnrnpd	89	74.632	ENSTBEG00000002327	HNRNPD	98	80.882	Tupaia_belangeri
ENSSFOG00015005913	hnrnpd	89	79.599	ENSTTRG00000007592	HNRNPD	86	81.759	Tursiops_truncatus
ENSSFOG00015005913	hnrnpd	92	78.397	ENSUAMG00000011374	HNRNPD	77	81.882	Ursus_americanus
ENSSFOG00015005913	hnrnpd	89	82.288	ENSUMAG00000008685	HNRNPD	83	85.978	Ursus_maritimus
ENSSFOG00015005913	hnrnpd	93	81.992	ENSVPAG00000004374	HNRNPD	100	88.506	Vicugna_pacos
ENSSFOG00015005913	hnrnpd	89	79.599	ENSVVUG00000024658	HNRNPD	86	81.759	Vulpes_vulpes
ENSSFOG00015005913	hnrnpd	88	79.061	ENSXETG00000012569	hnrnpd	99	73.871	Xenopus_tropicalis
ENSSFOG00015005913	hnrnpd	93	85.000	ENSXCOG00000017639	hnrnpd	100	88.846	Xiphophorus_couchianus
ENSSFOG00015005913	hnrnpd	100	78.931	ENSXMAG00000019151	hnrnpd	100	82.075	Xiphophorus_maculatus