EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSFOG00015005975 (Gene tree)
Gene ID
108927563
Gene Symbol
sf3a3
Alias
wu:fi15a06|wu:fj94f01|zgc:110227
Full Name
splicing factor 3a subunit 3
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
9286 bases
Position
chrKV410874.1:685914-695199
Accession
108927563
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015009238SF3a60_bindingdPF12108.81.9e-1511
ENSSFOP00015009224SF3a60_bindingdPF12108.81.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015009366-1479-ENSSFOP00015009238492 (aa)--
ENSSFOT00015009352-1914XM_018740964ENSSFOP00015009224501 (aa)XP_018596480A0A1W4Z6Z0
Gene Model
Click here to download ENSSFOG00015005975's gene model file
Pathways
Pathway IDPathway NameSource
sfm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005975's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015005975sf3a310092.415ENSG00000183431SF3A310092.415Homo_sapiens
ENSSFOG00015005975sf3a310095.609ENSAPOG00000015608sf3a310095.609Acanthochromis_polyacanthus
ENSSFOG00015005975sf3a310092.216ENSAMEG00000001262SF3A310092.216Ailuropoda_melanoleuca
ENSSFOG00015005975sf3a39588.955ENSACIG00000009061sf3a39988.955Amphilophus_citrinellus
ENSSFOG00015005975sf3a310095.808ENSAOCG00000013954sf3a310095.808Amphiprion_ocellaris
ENSSFOG00015005975sf3a310095.808ENSAPEG00000007297sf3a310095.808Amphiprion_percula
ENSSFOG00015005975sf3a310095.808ENSATEG00000008754sf3a310095.808Anabas_testudineus
ENSSFOG00015005975sf3a39492.751ENSAPLG00000014900SF3A310092.751Anas_platyrhynchos
ENSSFOG00015005975sf3a310091.218ENSACAG00000017058SF3A310091.218Anolis_carolinensis
ENSSFOG00015005975sf3a39989.357ENSANAG00000014878SF3A310089.357Aotus_nancymaae
ENSSFOG00015005975sf3a310072.056ENSANAG00000036903-10072.056Aotus_nancymaae
ENSSFOG00015005975sf3a310095.210ENSACLG00000017977sf3a310095.210Astatotilapia_calliptera
ENSSFOG00015005975sf3a310095.409ENSAMXG00000016855sf3a38795.409Astyanax_mexicanus
ENSSFOG00015005975sf3a310092.016ENSBTAG00000007299SF3A310092.016Bos_taurus
ENSSFOG00015005975sf3a310052.087WBGene00011758T13H5.410052.087Caenorhabditis_elegans
ENSSFOG00015005975sf3a310092.415ENSCJAG00000002176SF3A310092.415Callithrix_jacchus
ENSSFOG00015005975sf3a310092.216ENSCAFG00000000683-10092.216Canis_familiaris
ENSSFOG00015005975sf3a310092.216ENSCAFG00000003222-10092.216Canis_familiaris
ENSSFOG00015005975sf3a310092.216ENSCAFG00020006186SF3A310092.216Canis_lupus_dingo
ENSSFOG00015005975sf3a310092.016ENSCHIG00000020638SF3A310092.016Capra_hircus
ENSSFOG00015005975sf3a310086.028ENSTSYG00000008417SF3A310086.028Carlito_syrichta
ENSSFOG00015005975sf3a38760.412ENSCAPG00000003466SF3A310057.666Cavia_aperea
ENSSFOG00015005975sf3a310092.415ENSCPOG00000008660SF3A310092.415Cavia_porcellus
ENSSFOG00015005975sf3a310092.415ENSCCAG00000033732SF3A310092.415Cebus_capucinus
ENSSFOG00015005975sf3a310066.402ENSCCAG00000034048-10063.419Cebus_capucinus
ENSSFOG00015005975sf3a310092.415ENSCATG00000043496SF3A310092.415Cercocebus_atys
ENSSFOG00015005975sf3a39474.414ENSCATG00000041660-10075.906Cercocebus_atys
ENSSFOG00015005975sf3a310069.323ENSCATG00000043537-10069.920Cercocebus_atys
ENSSFOG00015005975sf3a310092.415ENSCLAG00000010838SF3A310092.415Chinchilla_lanigera
ENSSFOG00015005975sf3a39592.017ENSCSAG00000001120SF3A310092.017Chlorocebus_sabaeus
ENSSFOG00015005975sf3a38087.302ENSCHOG00000006849SF3A38087.302Choloepus_hoffmanni
ENSSFOG00015005975sf3a37064.489ENSCPBG00000007472-9564.306Chrysemys_picta_bellii
ENSSFOG00015005975sf3a310085.163ENSCPBG00000018291-10085.163Chrysemys_picta_bellii
ENSSFOG00015005975sf3a310068.526ENSCING00000002730-10068.526Ciona_intestinalis
ENSSFOG00015005975sf3a310067.265ENSCSAVG00000005063-10067.265Ciona_savignyi
ENSSFOG00015005975sf3a310092.415ENSCANG00000042083SF3A310092.415Colobus_angolensis_palliatus
ENSSFOG00015005975sf3a310066.667ENSCANG00000035535-10066.667Colobus_angolensis_palliatus
ENSSFOG00015005975sf3a310092.814ENSCGRG00001011320Sf3a310092.814Cricetulus_griseus_chok1gshd
ENSSFOG00015005975sf3a310092.814ENSCGRG00000012156Sf3a310092.814Cricetulus_griseus_crigri
ENSSFOG00015005975sf3a310094.810ENSCSEG00000010401sf3a310094.810Cynoglossus_semilaevis
ENSSFOG00015005975sf3a39493.177ENSCVAG00000010239sf3a39593.177Cyprinodon_variegatus
ENSSFOG00015005975sf3a310094.810ENSDARG00000100114sf3a310094.988Danio_rerio
ENSSFOG00015005975sf3a39191.685ENSDNOG00000046628SF3A39991.685Dasypus_novemcinctus
ENSSFOG00015005975sf3a310092.216ENSDORG00000008798Sf3a310092.216Dipodomys_ordii
ENSSFOG00015005975sf3a310064.625FBgn0014366noi10064.427Drosophila_melanogaster
ENSSFOG00015005975sf3a310079.523ENSEBUG00000015411sf3a39280.119Eptatretus_burgeri
ENSSFOG00015005975sf3a310092.216ENSEASG00005012906SF3A310092.216Equus_asinus_asinus
ENSSFOG00015005975sf3a310092.216ENSECAG00000017333SF3A310092.216Equus_caballus
ENSSFOG00015005975sf3a310093.014ENSELUG00000010024sf3a310093.014Esox_lucius
ENSSFOG00015005975sf3a310092.216ENSFCAG00000027772SF3A310092.216Felis_catus
ENSSFOG00015005975sf3a310091.816ENSFALG00000001003SF3A310091.816Ficedula_albicollis
ENSSFOG00015005975sf3a310092.415ENSFDAG00000020908SF3A310092.415Fukomys_damarensis
ENSSFOG00015005975sf3a310094.611ENSFHEG00000019107sf3a310094.611Fundulus_heteroclitus
ENSSFOG00015005975sf3a310093.014ENSGMOG00000015540sf3a310093.014Gadus_morhua
ENSSFOG00015005975sf3a310091.617ENSGALG00000001540SF3A310091.617Gallus_gallus
ENSSFOG00015005975sf3a310094.810ENSGAFG00000002320sf3a310094.810Gambusia_affinis
ENSSFOG00015005975sf3a310095.609ENSGACG00000007842sf3a310095.609Gasterosteus_aculeatus
ENSSFOG00015005975sf3a310091.617ENSGAGG00000014980SF3A310091.617Gopherus_agassizii
ENSSFOG00015005975sf3a310071.457ENSGGOG00000022611-10071.058Gorilla_gorilla
ENSSFOG00015005975sf3a310092.415ENSGGOG00000013928SF3A310092.415Gorilla_gorilla
ENSSFOG00015005975sf3a310095.210ENSHBUG00000018158sf3a310095.395Haplochromis_burtoni
ENSSFOG00015005975sf3a310092.415ENSHGLG00000012502SF3A310092.415Heterocephalus_glaber_female
ENSSFOG00015005975sf3a310092.415ENSHGLG00100010546SF3A310092.415Heterocephalus_glaber_male
ENSSFOG00015005975sf3a310092.814ENSHCOG00000015109sf3a310092.814Hippocampus_comes
ENSSFOG00015005975sf3a310093.812ENSIPUG00000011603sf3a310093.812Ictalurus_punctatus
ENSSFOG00015005975sf3a310092.615ENSSTOG00000001691SF3A310092.615Ictidomys_tridecemlineatus
ENSSFOG00015005975sf3a310092.615ENSJJAG00000012404Sf3a310092.615Jaculus_jaculus
ENSSFOG00015005975sf3a310095.010ENSKMAG00000007632sf3a310095.010Kryptolebias_marmoratus
ENSSFOG00015005975sf3a310086.853ENSLBEG00000000816sf3a310086.853Labrus_bergylta
ENSSFOG00015005975sf3a310096.407ENSLOCG00000003273sf3a310096.407Lepisosteus_oculatus
ENSSFOG00015005975sf3a310080.439ENSLAFG00000008094SF3A310080.439Loxodonta_africana
ENSSFOG00015005975sf3a39474.200ENSMFAG00000036706-10075.906Macaca_fascicularis
ENSSFOG00015005975sf3a310092.415ENSMFAG00000043047SF3A310092.415Macaca_fascicularis
ENSSFOG00015005975sf3a310092.415ENSMMUG00000023199SF3A310092.415Macaca_mulatta
ENSSFOG00015005975sf3a310072.056ENSMMUG00000038820-10073.653Macaca_mulatta
ENSSFOG00015005975sf3a39472.281ENSMNEG00000028686-10073.987Macaca_nemestrina
ENSSFOG00015005975sf3a310092.415ENSMNEG00000044291SF3A310092.415Macaca_nemestrina
ENSSFOG00015005975sf3a310092.415ENSMLEG00000030641SF3A310092.415Mandrillus_leucophaeus
ENSSFOG00015005975sf3a310068.725ENSMLEG00000028631-10069.323Mandrillus_leucophaeus
ENSSFOG00015005975sf3a310076.248ENSMLEG00000036714-10077.645Mandrillus_leucophaeus
ENSSFOG00015005975sf3a310096.008ENSMAMG00000001942sf3a310096.008Mastacembelus_armatus
ENSSFOG00015005975sf3a310095.210ENSMZEG00005016987sf3a310095.210Maylandia_zebra
ENSSFOG00015005975sf3a310087.276ENSMGAG00000002875SF3A310087.276Meleagris_gallopavo
ENSSFOG00015005975sf3a39189.738ENSMICG00000026541-10089.738Microcebus_murinus
ENSSFOG00015005975sf3a310086.627ENSMICG00000043548-10086.627Microcebus_murinus
ENSSFOG00015005975sf3a310088.024ENSMICG00000001485-10088.024Microcebus_murinus
ENSSFOG00015005975sf3a310089.621ENSMOCG00000019939-10089.621Microtus_ochrogaster
ENSSFOG00015005975sf3a39586.947ENSMOCG00000014565-9785.684Microtus_ochrogaster
ENSSFOG00015005975sf3a310095.210ENSMMOG00000014307sf3a310095.210Mola_mola
ENSSFOG00015005975sf3a310072.621ENSMODG00000017729-10071.622Monodelphis_domestica
ENSSFOG00015005975sf3a310085.030ENSMODG00000024045-10085.030Monodelphis_domestica
ENSSFOG00015005975sf3a310095.210ENSMALG00000004836sf3a310095.614Monopterus_albus
ENSSFOG00015005975sf3a310092.814MGP_CAROLIEiJ_G0026449Sf3a310092.814Mus_caroli
ENSSFOG00015005975sf3a310092.814ENSMUSG00000028902Sf3a310092.814Mus_musculus
ENSSFOG00015005975sf3a310087.425MGP_PahariEiJ_G0028780Sf3a310087.425Mus_pahari
ENSSFOG00015005975sf3a310092.814MGP_SPRETEiJ_G0027428Sf3a310092.814Mus_spretus
ENSSFOG00015005975sf3a310092.216ENSMLUG00000000991SF3A310092.216Myotis_lucifugus
ENSSFOG00015005975sf3a310087.425ENSNGAG00000018032Sf3a310087.425Nannospalax_galili
ENSSFOG00015005975sf3a310084.232ENSNLEG00000011720SF3A310084.232Nomascus_leucogenys
ENSSFOG00015005975sf3a310092.415ENSOPRG00000012785SF3A310092.415Ochotona_princeps
ENSSFOG00015005975sf3a310086.627ENSODEG00000006854-10089.222Octodon_degus
ENSSFOG00015005975sf3a310080.639ENSODEG00000018393-10080.439Octodon_degus
ENSSFOG00015005975sf3a310077.689ENSODEG00000000937-10080.080Octodon_degus
ENSSFOG00015005975sf3a310088.224ENSODEG00000007470-10088.224Octodon_degus
ENSSFOG00015005975sf3a38895.402ENSONIG00000010296sf3a310095.402Oreochromis_niloticus
ENSSFOG00015005975sf3a39492.111ENSOANG00000002473SF3A310092.111Ornithorhynchus_anatinus
ENSSFOG00015005975sf3a310092.415ENSOCUG00000005407SF3A310092.415Oryctolagus_cuniculus
ENSSFOG00015005975sf3a310094.212ENSORLG00000008175sf3a310094.212Oryzias_latipes
ENSSFOG00015005975sf3a310094.012ENSORLG00020013708sf3a310094.012Oryzias_latipes_hni
ENSSFOG00015005975sf3a310094.012ENSORLG00015004104sf3a310094.012Oryzias_latipes_hsok
ENSSFOG00015005975sf3a310094.810ENSOMEG00000020177sf3a310094.810Oryzias_melastigma
ENSSFOG00015005975sf3a310092.016ENSOARG00000019950SF3A310092.016Ovis_aries
ENSSFOG00015005975sf3a310070.858ENSPPAG00000039955-10070.459Pan_paniscus
ENSSFOG00015005975sf3a310092.415ENSPPAG00000034066SF3A310092.415Pan_paniscus
ENSSFOG00015005975sf3a310092.216ENSPPRG00000001258SF3A310092.216Panthera_pardus
ENSSFOG00015005975sf3a310092.216ENSPTIG00000007515SF3A310092.216Panthera_tigris_altaica
ENSSFOG00015005975sf3a310071.657ENSPTRG00000046013-10071.257Pan_troglodytes
ENSSFOG00015005975sf3a310092.415ENSPTRG00000000559SF3A310092.415Pan_troglodytes
ENSSFOG00015005975sf3a310079.042ENSPANG00000029393-10080.439Papio_anubis
ENSSFOG00015005975sf3a38782.955ENSPANG00000031214-10067.265Papio_anubis
ENSSFOG00015005975sf3a310092.415ENSPANG00000021859SF3A310092.415Papio_anubis
ENSSFOG00015005975sf3a310096.208ENSPKIG00000004719sf3a310096.208Paramormyrops_kingsleyae
ENSSFOG00015005975sf3a310089.861ENSPSIG00000004273SF3A310089.861Pelodiscus_sinensis
ENSSFOG00015005975sf3a39192.998ENSPMGG00000003610sf3a39492.998Periophthalmus_magnuspinnatus
ENSSFOG00015005975sf3a310092.814ENSPEMG00000020805Sf3a310092.814Peromyscus_maniculatus_bairdii
ENSSFOG00015005975sf3a35478.889ENSPMAG00000001044sf3a39878.889Petromyzon_marinus
ENSSFOG00015005975sf3a310092.216ENSPCIG00000025719SF3A310092.216Phascolarctos_cinereus
ENSSFOG00015005975sf3a310094.810ENSPFOG00000005284sf3a310094.810Poecilia_formosa
ENSSFOG00015005975sf3a39991.549ENSPLAG00000003979sf3a39291.549Poecilia_latipinna
ENSSFOG00015005975sf3a37891.667ENSPMEG00000021132sf3a38891.667Poecilia_mexicana
ENSSFOG00015005975sf3a310094.611ENSPREG00000013802sf3a310094.611Poecilia_reticulata
ENSSFOG00015005975sf3a310089.820ENSPPYG00000001519SF3A310089.820Pongo_abelii
ENSSFOG00015005975sf3a310085.828ENSPCAG00000010734SF3A310085.828Procavia_capensis
ENSSFOG00015005975sf3a310081.349ENSPCOG00000020389-10081.349Propithecus_coquereli
ENSSFOG00015005975sf3a310076.048ENSPCOG00000017131-10076.048Propithecus_coquereli
ENSSFOG00015005975sf3a310080.838ENSPVAG00000010158SF3A310080.838Pteropus_vampyrus
ENSSFOG00015005975sf3a310095.210ENSPNYG00000000786sf3a310095.210Pundamilia_nyererei
ENSSFOG00015005975sf3a310096.008ENSPNAG00000010298sf3a310096.008Pygocentrus_nattereri
ENSSFOG00015005975sf3a310092.814ENSRNOG00000007629Sf3a310092.814Rattus_norvegicus
ENSSFOG00015005975sf3a310092.415ENSRBIG00000043567SF3A310092.415Rhinopithecus_bieti
ENSSFOG00015005975sf3a310068.663ENSRBIG00000043833-10068.663Rhinopithecus_bieti
ENSSFOG00015005975sf3a310068.862ENSRBIG00000041123-10068.862Rhinopithecus_bieti
ENSSFOG00015005975sf3a310092.415ENSRROG00000033888SF3A310092.415Rhinopithecus_roxellana
ENSSFOG00015005975sf3a39473.774ENSRROG00000032346-10073.774Rhinopithecus_roxellana
ENSSFOG00015005975sf3a39588.539ENSSBOG00000032688SF3A310089.109Saimiri_boliviensis_boliviensis
ENSSFOG00015005975sf3a310067.265ENSSBOG00000026932-10066.267Saimiri_boliviensis_boliviensis
ENSSFOG00015005975sf3a39292.936ENSSHAG00000014530SF3A310092.936Sarcophilus_harrisii
ENSSFOG00015005975sf3a310095.409ENSSMAG00000020213sf3a310095.409Scophthalmus_maximus
ENSSFOG00015005975sf3a310092.016ENSSDUG00000011590sf3a310092.016Seriola_dumerili
ENSSFOG00015005975sf3a310096.607ENSSLDG00000020635sf3a310096.607Seriola_lalandi_dorsalis
ENSSFOG00015005975sf3a310091.417ENSSPUG00000004010SF3A310091.417Sphenodon_punctatus
ENSSFOG00015005975sf3a310096.208ENSSPAG00000018653sf3a310096.208Stegastes_partitus
ENSSFOG00015005975sf3a310092.216ENSSSCG00000003643SF3A310092.216Sus_scrofa
ENSSFOG00015005975sf3a38892.874ENSTGUG00000001466SF3A310092.661Taeniopygia_guttata
ENSSFOG00015005975sf3a310094.012ENSTRUG00000009089sf3a310094.012Takifugu_rubripes
ENSSFOG00015005975sf3a310094.235ENSTNIG00000009800sf3a310094.235Tetraodon_nigroviridis
ENSSFOG00015005975sf3a310080.639ENSTBEG00000007614SF3A310080.639Tupaia_belangeri
ENSSFOG00015005975sf3a310092.016ENSTTRG00000013519SF3A310092.016Tursiops_truncatus
ENSSFOG00015005975sf3a310092.216ENSUAMG00000006134SF3A310092.216Ursus_americanus
ENSSFOG00015005975sf3a310092.216ENSUMAG00000021250SF3A310092.216Ursus_maritimus
ENSSFOG00015005975sf3a36797.674ENSVPAG00000004778SF3A37397.674Vicugna_pacos
ENSSFOG00015005975sf3a310088.423ENSVVUG00000022908SF3A310088.423Vulpes_vulpes
ENSSFOG00015005975sf3a310089.222ENSXETG00000022923sf3a310089.222Xenopus_tropicalis
ENSSFOG00015005975sf3a310094.810ENSXMAG00000017165sf3a310094.810Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us