EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015005978 (Gene tree)
Gene ID: 108939768
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12479 bases
Position: chrKV411197.1:7812439-7824917
Accession: 108939768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009174	U3_assoc_6	PF08640.11	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009301	-	5928	XM_018761367	ENSSFOP00015009174	598 (aa)	XP_018616883	A0A1W5ATI9

Gene Model

Click here to download ENSSFOG00015005978's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015005978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015005978	utp6	100	56.667	ENSG00000108651	UTP6	100	56.667	Homo_sapiens
ENSSFOG00015005978	utp6	100	71.906	ENSAPOG00000000435	utp6	100	71.906	Acanthochromis_polyacanthus
ENSSFOG00015005978	utp6	99	54.348	ENSAMEG00000005443	UTP6	99	54.348	Ailuropoda_melanoleuca
ENSSFOG00015005978	utp6	100	69.398	ENSACIG00000004124	utp6	100	69.398	Amphilophus_citrinellus
ENSSFOG00015005978	utp6	100	71.070	ENSAOCG00000016812	utp6	100	71.070	Amphiprion_ocellaris
ENSSFOG00015005978	utp6	100	71.070	ENSAPEG00000023565	utp6	100	71.070	Amphiprion_percula
ENSSFOG00015005978	utp6	100	72.575	ENSATEG00000003401	utp6	100	72.575	Anabas_testudineus
ENSSFOG00015005978	utp6	99	58.376	ENSAPLG00000005821	UTP6	99	58.376	Anas_platyrhynchos
ENSSFOG00015005978	utp6	100	62.104	ENSACAG00000009472	UTP6	100	62.104	Anolis_carolinensis
ENSSFOG00015005978	utp6	100	56.667	ENSANAG00000034603	UTP6	100	56.667	Aotus_nancymaae
ENSSFOG00015005978	utp6	100	72.074	ENSACLG00000006728	utp6	100	72.074	Astatotilapia_calliptera
ENSSFOG00015005978	utp6	100	71.070	ENSAMXG00000009478	utp6	100	71.070	Astyanax_mexicanus
ENSSFOG00015005978	utp6	100	52.667	ENSBTAG00000015612	UTP6	100	52.667	Bos_taurus
ENSSFOG00015005978	utp6	99	51.672	ENSBTAG00000003769	-	98	51.672	Bos_taurus
ENSSFOG00015005978	utp6	100	56.667	ENSCJAG00000014115	UTP6	100	56.667	Callithrix_jacchus
ENSSFOG00015005978	utp6	100	55.333	ENSCAFG00000018507	UTP6	100	55.333	Canis_familiaris
ENSSFOG00015005978	utp6	100	55.333	ENSCAFG00020014678	UTP6	100	55.333	Canis_lupus_dingo
ENSSFOG00015005978	utp6	100	53.000	ENSCHIG00000009726	-	100	53.000	Capra_hircus
ENSSFOG00015005978	utp6	100	53.000	ENSCHIG00000017954	-	100	53.000	Capra_hircus
ENSSFOG00015005978	utp6	99	51.753	ENSTSYG00000002202	UTP6	99	51.753	Carlito_syrichta
ENSSFOG00015005978	utp6	86	50.193	ENSCAPG00000017595	UTP6	93	50.193	Cavia_aperea
ENSSFOG00015005978	utp6	99	55.927	ENSCPOG00000014294	UTP6	100	55.927	Cavia_porcellus
ENSSFOG00015005978	utp6	100	52.667	ENSCCAG00000033318	-	100	52.667	Cebus_capucinus
ENSSFOG00015005978	utp6	100	56.000	ENSCATG00000034868	UTP6	100	56.000	Cercocebus_atys
ENSSFOG00015005978	utp6	99	56.594	ENSCLAG00000007274	UTP6	99	56.594	Chinchilla_lanigera
ENSSFOG00015005978	utp6	100	56.167	ENSCSAG00000006595	UTP6	100	56.167	Chlorocebus_sabaeus
ENSSFOG00015005978	utp6	73	47.101	ENSCHOG00000010940	-	73	47.101	Choloepus_hoffmanni
ENSSFOG00015005978	utp6	100	62.104	ENSCPBG00000004652	UTP6	100	62.104	Chrysemys_picta_bellii
ENSSFOG00015005978	utp6	99	32.358	ENSCING00000022947	-	99	32.358	Ciona_intestinalis
ENSSFOG00015005978	utp6	88	41.210	ENSCANG00000031141	UTP6	90	41.210	Colobus_angolensis_palliatus
ENSSFOG00015005978	utp6	99	54.925	ENSCGRG00001000046	Utp6	100	54.925	Cricetulus_griseus_chok1gshd
ENSSFOG00015005978	utp6	94	54.145	ENSCGRG00000011543	Utp6	99	54.145	Cricetulus_griseus_crigri
ENSSFOG00015005978	utp6	100	65.609	ENSCSEG00000013422	utp6	100	75.410	Cynoglossus_semilaevis
ENSSFOG00015005978	utp6	100	70.401	ENSCVAG00000020322	utp6	100	70.401	Cyprinodon_variegatus
ENSSFOG00015005978	utp6	100	71.739	ENSDARG00000098433	utp6	100	79.558	Danio_rerio
ENSSFOG00015005978	utp6	100	56.500	ENSDNOG00000037018	UTP6	100	56.500	Dasypus_novemcinctus
ENSSFOG00015005978	utp6	91	56.856	ENSDORG00000003843	Utp6	99	56.856	Dipodomys_ordii
ENSSFOG00015005978	utp6	100	56.000	ENSEASG00005010870	UTP6	100	56.000	Equus_asinus_asinus
ENSSFOG00015005978	utp6	100	56.167	ENSECAG00000022217	UTP6	100	56.167	Equus_caballus
ENSSFOG00015005978	utp6	100	70.067	ENSELUG00000006618	utp6	100	70.067	Esox_lucius
ENSSFOG00015005978	utp6	100	54.409	ENSFCAG00000015795	UTP6	100	54.409	Felis_catus
ENSSFOG00015005978	utp6	100	60.935	ENSFALG00000002282	UTP6	100	60.935	Ficedula_albicollis
ENSSFOG00015005978	utp6	99	56.594	ENSFDAG00000019506	UTP6	100	56.594	Fukomys_damarensis
ENSSFOG00015005978	utp6	100	69.732	ENSFHEG00000010373	utp6	100	69.732	Fundulus_heteroclitus
ENSSFOG00015005978	utp6	100	67.391	ENSGMOG00000011958	utp6	100	67.391	Gadus_morhua
ENSSFOG00015005978	utp6	100	61.102	ENSGALG00000003260	UTP6	100	61.102	Gallus_gallus
ENSSFOG00015005978	utp6	100	70.736	ENSGAFG00000008505	utp6	100	70.736	Gambusia_affinis
ENSSFOG00015005978	utp6	100	70.903	ENSGACG00000019424	utp6	100	70.903	Gasterosteus_aculeatus
ENSSFOG00015005978	utp6	100	61.436	ENSGAGG00000004820	UTP6	100	61.436	Gopherus_agassizii
ENSSFOG00015005978	utp6	100	57.000	ENSGGOG00000013569	UTP6	100	57.000	Gorilla_gorilla
ENSSFOG00015005978	utp6	100	45.075	ENSGGOG00000026003	-	100	45.075	Gorilla_gorilla
ENSSFOG00015005978	utp6	100	72.074	ENSHBUG00000018668	utp6	100	72.074	Haplochromis_burtoni
ENSSFOG00015005978	utp6	99	51.765	ENSHGLG00000008642	-	99	51.765	Heterocephalus_glaber_female
ENSSFOG00015005978	utp6	99	55.351	ENSHGLG00000010332	UTP6	100	55.351	Heterocephalus_glaber_female
ENSSFOG00015005978	utp6	99	53.177	ENSHGLG00100014271	-	100	53.177	Heterocephalus_glaber_male
ENSSFOG00015005978	utp6	95	52.632	ENSHGLG00100006047	-	99	52.632	Heterocephalus_glaber_male
ENSSFOG00015005978	utp6	100	66.054	ENSHCOG00000017277	utp6	100	66.054	Hippocampus_comes
ENSSFOG00015005978	utp6	100	69.732	ENSIPUG00000022587	Utp6	100	69.732	Ictalurus_punctatus
ENSSFOG00015005978	utp6	99	56.594	ENSSTOG00000015875	UTP6	100	56.594	Ictidomys_tridecemlineatus
ENSSFOG00015005978	utp6	100	70.903	ENSKMAG00000021631	utp6	100	70.903	Kryptolebias_marmoratus
ENSSFOG00015005978	utp6	100	71.405	ENSLBEG00000002115	utp6	100	71.405	Labrus_bergylta
ENSSFOG00015005978	utp6	100	63.606	ENSLACG00000017158	UTP6	100	63.606	Latimeria_chalumnae
ENSSFOG00015005978	utp6	91	70.620	ENSLOCG00000013797	utp6	90	70.620	Lepisosteus_oculatus
ENSSFOG00015005978	utp6	100	55.500	ENSLAFG00000013008	UTP6	100	55.500	Loxodonta_africana
ENSSFOG00015005978	utp6	100	56.167	ENSMFAG00000038842	UTP6	100	56.167	Macaca_fascicularis
ENSSFOG00015005978	utp6	99	39.057	ENSMFAG00000041904	-	99	39.057	Macaca_fascicularis
ENSSFOG00015005978	utp6	100	56.167	ENSMMUG00000020403	UTP6	100	56.167	Macaca_mulatta
ENSSFOG00015005978	utp6	100	56.167	ENSMNEG00000039480	UTP6	100	56.167	Macaca_nemestrina
ENSSFOG00015005978	utp6	99	43.406	ENSMLEG00000039364	-	99	43.406	Mandrillus_leucophaeus
ENSSFOG00015005978	utp6	100	48.500	ENSMLEG00000032174	UTP6	100	48.500	Mandrillus_leucophaeus
ENSSFOG00015005978	utp6	100	71.405	ENSMAMG00000002228	utp6	99	71.405	Mastacembelus_armatus
ENSSFOG00015005978	utp6	100	72.074	ENSMZEG00005023895	utp6	100	72.074	Maylandia_zebra
ENSSFOG00015005978	utp6	95	59.825	ENSMGAG00000008111	UTP6	100	59.825	Meleagris_gallopavo
ENSSFOG00015005978	utp6	99	54.758	ENSMAUG00000021895	Utp6	100	54.758	Mesocricetus_auratus
ENSSFOG00015005978	utp6	100	55.408	ENSMICG00000002632	UTP6	100	55.408	Microcebus_murinus
ENSSFOG00015005978	utp6	99	55.092	ENSMOCG00000014163	Utp6	100	55.092	Microtus_ochrogaster
ENSSFOG00015005978	utp6	100	67.057	ENSMMOG00000008653	utp6	100	69.492	Mola_mola
ENSSFOG00015005978	utp6	100	59.667	ENSMODG00000019206	UTP6	100	59.667	Monodelphis_domestica
ENSSFOG00015005978	utp6	100	71.739	ENSMALG00000021112	utp6	100	71.739	Monopterus_albus
ENSSFOG00015005978	utp6	99	55.760	MGP_CAROLIEiJ_G0016828	Utp6	100	55.760	Mus_caroli
ENSSFOG00015005978	utp6	99	55.760	ENSMUSG00000035575	Utp6	100	55.760	Mus_musculus
ENSSFOG00015005978	utp6	99	51.085	MGP_PahariEiJ_G0017965	Utp6	100	51.085	Mus_pahari
ENSSFOG00015005978	utp6	99	55.760	MGP_SPRETEiJ_G0017672	Utp6	100	55.760	Mus_spretus
ENSSFOG00015005978	utp6	100	53.923	ENSMPUG00000014581	UTP6	100	53.923	Mustela_putorius_furo
ENSSFOG00015005978	utp6	100	54.833	ENSMLUG00000016422	UTP6	100	54.833	Myotis_lucifugus
ENSSFOG00015005978	utp6	99	55.593	ENSNGAG00000015482	Utp6	100	55.593	Nannospalax_galili
ENSSFOG00015005978	utp6	100	72.241	ENSNBRG00000019714	utp6	100	72.241	Neolamprologus_brichardi
ENSSFOG00015005978	utp6	100	55.333	ENSNLEG00000011009	UTP6	100	55.333	Nomascus_leucogenys
ENSSFOG00015005978	utp6	88	53.901	ENSOPRG00000008446	-	89	53.901	Ochotona_princeps
ENSSFOG00015005978	utp6	66	61.181	ENSODEG00000011971	UTP6	99	61.181	Octodon_degus
ENSSFOG00015005978	utp6	100	71.739	ENSONIG00000018090	utp6	100	71.739	Oreochromis_niloticus
ENSSFOG00015005978	utp6	96	58.160	ENSOANG00000004279	UTP6	97	58.160	Ornithorhynchus_anatinus
ENSSFOG00015005978	utp6	99	54.925	ENSOCUG00000016980	UTP6	99	54.925	Oryctolagus_cuniculus
ENSSFOG00015005978	utp6	99	70.352	ENSORLG00000003546	utp6	64	70.352	Oryzias_latipes
ENSSFOG00015005978	utp6	99	70.352	ENSORLG00020010377	utp6	99	70.352	Oryzias_latipes_hni
ENSSFOG00015005978	utp6	99	69.849	ENSORLG00015008893	utp6	99	69.849	Oryzias_latipes_hsok
ENSSFOG00015005978	utp6	100	71.070	ENSOMEG00000017487	utp6	100	71.070	Oryzias_melastigma
ENSSFOG00015005978	utp6	87	48.577	ENSOGAG00000004511	UTP6	100	48.577	Otolemur_garnettii
ENSSFOG00015005978	utp6	100	53.167	ENSOARG00000013474	UTP6	100	53.167	Ovis_aries
ENSSFOG00015005978	utp6	100	56.833	ENSPPAG00000038089	UTP6	100	56.833	Pan_paniscus
ENSSFOG00015005978	utp6	100	45.576	ENSPPAG00000016895	-	100	45.576	Pan_paniscus
ENSSFOG00015005978	utp6	100	55.833	ENSPPRG00000001010	UTP6	100	55.833	Panthera_pardus
ENSSFOG00015005978	utp6	100	56.000	ENSPTIG00000013913	UTP6	100	56.000	Panthera_tigris_altaica
ENSSFOG00015005978	utp6	100	56.833	ENSPTRG00000008977	UTP6	100	56.833	Pan_troglodytes
ENSSFOG00015005978	utp6	100	45.576	ENSPTRG00000044798	-	100	45.576	Pan_troglodytes
ENSSFOG00015005978	utp6	100	54.409	ENSPANG00000023113	UTP6	100	54.409	Papio_anubis
ENSSFOG00015005978	utp6	99	43.311	ENSPANG00000034274	-	99	43.311	Papio_anubis
ENSSFOG00015005978	utp6	100	74.582	ENSPKIG00000004653	utp6	100	74.582	Paramormyrops_kingsleyae
ENSSFOG00015005978	utp6	100	60.267	ENSPSIG00000012435	UTP6	100	60.267	Pelodiscus_sinensis
ENSSFOG00015005978	utp6	100	70.903	ENSPMGG00000009548	utp6	100	70.903	Periophthalmus_magnuspinnatus
ENSSFOG00015005978	utp6	99	54.424	ENSPEMG00000014081	Utp6	100	54.424	Peromyscus_maniculatus_bairdii
ENSSFOG00015005978	utp6	93	43.794	ENSPMAG00000009561	utp6	100	43.794	Petromyzon_marinus
ENSSFOG00015005978	utp6	100	61.603	ENSPCIG00000029968	UTP6	86	61.603	Phascolarctos_cinereus
ENSSFOG00015005978	utp6	100	70.067	ENSPFOG00000013918	utp6	100	70.067	Poecilia_formosa
ENSSFOG00015005978	utp6	100	70.401	ENSPLAG00000017825	utp6	100	70.401	Poecilia_latipinna
ENSSFOG00015005978	utp6	100	70.067	ENSPMEG00000008133	utp6	100	70.067	Poecilia_mexicana
ENSSFOG00015005978	utp6	100	68.227	ENSPREG00000013108	utp6	99	68.227	Poecilia_reticulata
ENSSFOG00015005978	utp6	100	54.333	ENSPPYG00000008154	UTP6	100	54.333	Pongo_abelii
ENSSFOG00015005978	utp6	100	55.574	ENSPCOG00000010224	UTP6	100	55.574	Propithecus_coquereli
ENSSFOG00015005978	utp6	100	52.500	ENSPVAG00000015759	UTP6	100	52.500	Pteropus_vampyrus
ENSSFOG00015005978	utp6	100	71.739	ENSPNYG00000002290	utp6	100	71.739	Pundamilia_nyererei
ENSSFOG00015005978	utp6	100	68.562	ENSPNAG00000027370	utp6	100	68.562	Pygocentrus_nattereri
ENSSFOG00015005978	utp6	99	55.092	ENSRNOG00000014209	Utp6	100	55.092	Rattus_norvegicus
ENSSFOG00015005978	utp6	100	56.000	ENSRBIG00000020822	UTP6	100	56.000	Rhinopithecus_bieti
ENSSFOG00015005978	utp6	100	56.000	ENSRROG00000036838	UTP6	100	56.000	Rhinopithecus_roxellana
ENSSFOG00015005978	utp6	100	71.572	ENSSMAG00000014772	utp6	100	71.572	Scophthalmus_maximus
ENSSFOG00015005978	utp6	100	72.742	ENSSDUG00000000329	utp6	100	72.742	Seriola_dumerili
ENSSFOG00015005978	utp6	100	72.241	ENSSLDG00000016724	utp6	100	72.241	Seriola_lalandi_dorsalis
ENSSFOG00015005978	utp6	99	49.161	ENSSARG00000010778	UTP6	99	49.161	Sorex_araneus
ENSSFOG00015005978	utp6	100	60.601	ENSSPUG00000005273	UTP6	100	60.601	Sphenodon_punctatus
ENSSFOG00015005978	utp6	100	70.234	ENSSPAG00000011871	utp6	99	70.234	Stegastes_partitus
ENSSFOG00015005978	utp6	100	56.000	ENSSSCG00000017745	UTP6	100	56.000	Sus_scrofa
ENSSFOG00015005978	utp6	100	60.935	ENSTGUG00000004999	UTP6	100	60.935	Taeniopygia_guttata
ENSSFOG00015005978	utp6	99	68.174	ENSTRUG00000012005	utp6	100	68.174	Takifugu_rubripes
ENSSFOG00015005978	utp6	99	67.002	ENSTNIG00000003235	utp6	100	67.002	Tetraodon_nigroviridis
ENSSFOG00015005978	utp6	65	56.354	ENSTBEG00000005388	-	65	56.354	Tupaia_belangeri
ENSSFOG00015005978	utp6	100	55.333	ENSTTRG00000009911	UTP6	100	55.333	Tursiops_truncatus
ENSSFOG00015005978	utp6	99	55.017	ENSUMAG00000015139	UTP6	99	55.017	Ursus_maritimus
ENSSFOG00015005978	utp6	100	55.333	ENSVPAG00000005782	UTP6	100	55.333	Vicugna_pacos
ENSSFOG00015005978	utp6	100	55.500	ENSVVUG00000012238	UTP6	100	55.500	Vulpes_vulpes
ENSSFOG00015005978	utp6	100	50.918	ENSXETG00000020057	utp6	100	50.918	Xenopus_tropicalis
ENSSFOG00015005978	utp6	100	70.333	ENSXCOG00000013626	utp6	100	82.759	Xiphophorus_couchianus
ENSSFOG00015005978	utp6	100	70.569	ENSXMAG00000017414	utp6	100	70.569	Xiphophorus_maculatus