EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015006095 (Gene tree)
Gene ID: 108936188
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 25381 bases
Position: chrKV411115.1:1237433-1262813
Accession: 108936188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009372	Exo_endo_phos	PF03372.23	7.2e-14	1	1
ENSSFOP00015009419	Exo_endo_phos	PF03372.23	7.2e-14	1	1
ENSSFOP00015009419	DUF1866	PF08952.11	6.3e-56	1	1
ENSSFOP00015009372	DUF1866	PF08952.11	6.4e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009500	-	4913	XM_018755372	ENSSFOP00015009372	1580 (aa)	XP_018610888	-
ENSSFOT00015009547	-	4874	XM_018755378	ENSSFOP00015009419	1567 (aa)	XP_018610894	-

Gene Model

Click here to download ENSSFOG00015006095's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00562	Inositol phosphate metabolism	KEGG
sfm01100	Metabolic pathways	KEGG
sfm04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006095	synj1	95	65.217	ENSG00000159082	SYNJ1	100	83.501	Homo_sapiens
ENSSFOG00015006095	synj1	76	84.360	ENSAPOG00000002809	synj1	99	82.502	Acanthochromis_polyacanthus
ENSSFOG00015006095	synj1	95	62.698	ENSAMEG00000015028	SYNJ1	93	64.340	Ailuropoda_melanoleuca
ENSSFOG00015006095	synj1	99	74.023	ENSACIG00000008857	synj1	99	81.297	Amphilophus_citrinellus
ENSSFOG00015006095	synj1	100	72.054	ENSAOCG00000009835	synj1	98	83.757	Amphiprion_ocellaris
ENSSFOG00015006095	synj1	100	73.158	ENSAPEG00000021010	synj1	90	79.934	Amphiprion_percula
ENSSFOG00015006095	synj1	100	73.778	ENSATEG00000002306	synj1	100	74.552	Anabas_testudineus
ENSSFOG00015006095	synj1	95	62.667	ENSAPLG00000011832	SYNJ1	95	64.127	Anas_platyrhynchos
ENSSFOG00015006095	synj1	79	70.817	ENSACAG00000003006	-	100	70.554	Anolis_carolinensis
ENSSFOG00015006095	synj1	95	62.665	ENSANAG00000027325	SYNJ1	100	70.567	Aotus_nancymaae
ENSSFOG00015006095	synj1	100	73.301	ENSACLG00000002255	synj1	100	83.247	Astatotilapia_calliptera
ENSSFOG00015006095	synj1	100	76.683	ENSAMXG00000008208	synj1	100	77.471	Astyanax_mexicanus
ENSSFOG00015006095	synj1	95	65.540	ENSBTAG00000003063	SYNJ1	99	72.088	Bos_taurus
ENSSFOG00015006095	synj1	95	65.822	ENSCJAG00000009187	SYNJ1	100	70.515	Callithrix_jacchus
ENSSFOG00015006095	synj1	95	62.468	ENSCAFG00000009041	SYNJ1	99	71.504	Canis_familiaris
ENSSFOG00015006095	synj1	95	65.407	ENSCAFG00020025776	SYNJ1	97	70.849	Canis_lupus_dingo
ENSSFOG00015006095	synj1	89	77.728	ENSCHIG00000005095	SYNJ1	96	65.107	Capra_hircus
ENSSFOG00015006095	synj1	95	65.400	ENSTSYG00000014541	SYNJ1	99	71.049	Carlito_syrichta
ENSSFOG00015006095	synj1	79	66.038	ENSCAPG00000014483	SYNJ1	95	67.884	Cavia_aperea
ENSSFOG00015006095	synj1	95	65.081	ENSCPOG00000012182	SYNJ1	100	70.365	Cavia_porcellus
ENSSFOG00015006095	synj1	95	66.057	ENSCCAG00000020825	SYNJ1	100	70.567	Cebus_capucinus
ENSSFOG00015006095	synj1	95	63.394	ENSCATG00000033891	SYNJ1	99	72.256	Cercocebus_atys
ENSSFOG00015006095	synj1	95	61.776	ENSCLAG00000009796	SYNJ1	100	83.165	Chinchilla_lanigera
ENSSFOG00015006095	synj1	80	69.125	ENSCSAG00000009654	SYNJ1	100	69.360	Chlorocebus_sabaeus
ENSSFOG00015006095	synj1	80	74.426	ENSCHOG00000012390	SYNJ1	81	75.170	Choloepus_hoffmanni
ENSSFOG00015006095	synj1	77	74.878	ENSCPBG00000006402	SYNJ1	96	75.122	Chrysemys_picta_bellii
ENSSFOG00015006095	synj1	95	65.212	ENSCANG00000031359	SYNJ1	100	70.398	Colobus_angolensis_palliatus
ENSSFOG00015006095	synj1	95	61.757	ENSCGRG00001010861	Synj1	100	69.806	Cricetulus_griseus_chok1gshd
ENSSFOG00015006095	synj1	83	67.690	ENSCGRG00000015749	Synj1	100	82.446	Cricetulus_griseus_crigri
ENSSFOG00015006095	synj1	76	84.761	ENSCSEG00000019614	synj1	99	83.554	Cynoglossus_semilaevis
ENSSFOG00015006095	synj1	94	71.366	ENSCVAG00000019250	synj1	99	81.490	Cyprinodon_variegatus
ENSSFOG00015006095	synj1	84	82.674	ENSDARG00000025011	synj1	100	85.152	Danio_rerio
ENSSFOG00015006095	synj1	95	60.513	ENSDNOG00000010732	SYNJ1	94	62.396	Dasypus_novemcinctus
ENSSFOG00015006095	synj1	69	78.632	ENSETEG00000018674	SYNJ1	67	78.632	Echinops_telfairi
ENSSFOG00015006095	synj1	95	66.579	ENSEASG00005006287	SYNJ1	96	79.724	Equus_asinus_asinus
ENSSFOG00015006095	synj1	95	66.361	ENSECAG00000004829	SYNJ1	99	72.734	Equus_caballus
ENSSFOG00015006095	synj1	87	71.747	ENSEEUG00000005150	SYNJ1	91	71.747	Erinaceus_europaeus
ENSSFOG00015006095	synj1	100	70.382	ENSELUG00000009731	synj1	98	77.753	Esox_lucius
ENSSFOG00015006095	synj1	95	65.332	ENSFCAG00000012498	SYNJ1	99	70.846	Felis_catus
ENSSFOG00015006095	synj1	79	53.169	ENSFALG00000004680	SYNJ1	93	57.143	Ficedula_albicollis
ENSSFOG00015006095	synj1	83	68.125	ENSFDAG00000016818	SYNJ1	100	83.309	Fukomys_damarensis
ENSSFOG00015006095	synj1	99	71.720	ENSFHEG00000017689	synj1	100	72.939	Fundulus_heteroclitus
ENSSFOG00015006095	synj1	66	83.897	ENSGMOG00000014852	synj1	82	83.694	Gadus_morhua
ENSSFOG00015006095	synj1	98	63.959	ENSGALG00000034317	SYNJ1	99	63.891	Gallus_gallus
ENSSFOG00015006095	synj1	86	81.758	ENSGAFG00000019466	synj1	98	75.109	Gambusia_affinis
ENSSFOG00015006095	synj1	83	76.998	ENSGACG00000020575	synj1	99	78.507	Gasterosteus_aculeatus
ENSSFOG00015006095	synj1	90	68.468	ENSGAGG00000022523	SYNJ1	99	70.864	Gopherus_agassizii
ENSSFOG00015006095	synj1	95	64.396	ENSGGOG00000015945	SYNJ1	100	71.504	Gorilla_gorilla
ENSSFOG00015006095	synj1	100	72.232	ENSHBUG00000007774	synj1	100	83.321	Haplochromis_burtoni
ENSSFOG00015006095	synj1	95	61.932	ENSHGLG00000006420	SYNJ1	100	82.734	Heterocephalus_glaber_female
ENSSFOG00015006095	synj1	95	63.303	ENSHGLG00100012591	SYNJ1	100	82.734	Heterocephalus_glaber_male
ENSSFOG00015006095	synj1	83	74.194	ENSHCOG00000012774	synj1	96	73.010	Hippocampus_comes
ENSSFOG00015006095	synj1	99	76.025	ENSIPUG00000010691	SYNJ1	100	76.404	Ictalurus_punctatus
ENSSFOG00015006095	synj1	96	62.319	ENSSTOG00000015806	SYNJ1	100	70.615	Ictidomys_tridecemlineatus
ENSSFOG00015006095	synj1	95	58.734	ENSJJAG00000020168	Synj1	96	61.702	Jaculus_jaculus
ENSSFOG00015006095	synj1	100	73.197	ENSKMAG00000004221	synj1	93	82.805	Kryptolebias_marmoratus
ENSSFOG00015006095	synj1	92	76.601	ENSLBEG00000015081	synj1	99	78.450	Labrus_bergylta
ENSSFOG00015006095	synj1	95	64.157	ENSLACG00000005928	SYNJ1	96	64.010	Latimeria_chalumnae
ENSSFOG00015006095	synj1	95	71.797	ENSLOCG00000009230	synj1	100	72.931	Lepisosteus_oculatus
ENSSFOG00015006095	synj1	95	62.659	ENSLAFG00000011806	SYNJ1	95	64.381	Loxodonta_africana
ENSSFOG00015006095	synj1	93	64.443	ENSMFAG00000018883	SYNJ1	99	69.428	Macaca_fascicularis
ENSSFOG00015006095	synj1	95	61.972	ENSMMUG00000004624	SYNJ1	100	69.432	Macaca_mulatta
ENSSFOG00015006095	synj1	95	65.271	ENSMNEG00000040077	SYNJ1	94	69.287	Macaca_nemestrina
ENSSFOG00015006095	synj1	95	65.468	ENSMLEG00000037029	SYNJ1	100	70.471	Mandrillus_leucophaeus
ENSSFOG00015006095	synj1	100	73.457	ENSMAMG00000013404	synj1	100	74.491	Mastacembelus_armatus
ENSSFOG00015006095	synj1	100	73.241	ENSMZEG00005024358	synj1	100	83.458	Maylandia_zebra
ENSSFOG00015006095	synj1	94	63.754	ENSMGAG00000014522	SYNJ1	100	61.954	Meleagris_gallopavo
ENSSFOG00015006095	synj1	83	67.836	ENSMAUG00000009743	Synj1	100	82.878	Mesocricetus_auratus
ENSSFOG00015006095	synj1	95	65.359	ENSMICG00000034953	SYNJ1	99	72.210	Microcebus_murinus
ENSSFOG00015006095	synj1	84	78.539	ENSMMOG00000010203	synj1	99	79.910	Mola_mola
ENSSFOG00015006095	synj1	80	64.563	ENSMODG00000021073	SYNJ1	99	64.504	Monodelphis_domestica
ENSSFOG00015006095	synj1	100	72.841	ENSMALG00000014015	synj1	97	75.569	Monopterus_albus
ENSSFOG00015006095	synj1	95	61.938	MGP_CAROLIEiJ_G0020951	Synj1	100	83.165	Mus_caroli
ENSSFOG00015006095	synj1	95	62.152	ENSMUSG00000022973	Synj1	100	83.165	Mus_musculus
ENSSFOG00015006095	synj1	95	62.183	MGP_PahariEiJ_G0016656	Synj1	100	83.165	Mus_pahari
ENSSFOG00015006095	synj1	95	62.310	MGP_SPRETEiJ_G0021857	Synj1	100	83.309	Mus_spretus
ENSSFOG00015006095	synj1	95	62.926	ENSMPUG00000001153	SYNJ1	95	64.218	Mustela_putorius_furo
ENSSFOG00015006095	synj1	62	55.205	ENSMLUG00000005764	-	92	55.396	Myotis_lucifugus
ENSSFOG00015006095	synj1	80	70.205	ENSNGAG00000000453	Synj1	100	83.022	Nannospalax_galili
ENSSFOG00015006095	synj1	100	73.178	ENSNBRG00000011936	synj1	94	82.458	Neolamprologus_brichardi
ENSSFOG00015006095	synj1	83	59.660	ENSNLEG00000003734	SYNJ1	99	66.068	Nomascus_leucogenys
ENSSFOG00015006095	synj1	72	59.805	ENSMEUG00000004158	-	73	61.644	Notamacropus_eugenii
ENSSFOG00015006095	synj1	88	77.455	ENSOPRG00000013602	SYNJ1	87	77.455	Ochotona_princeps
ENSSFOG00015006095	synj1	90	75.034	ENSONIG00000004667	synj1	100	77.561	Oreochromis_niloticus
ENSSFOG00015006095	synj1	81	65.330	ENSOANG00000006929	SYNJ1	88	64.559	Ornithorhynchus_anatinus
ENSSFOG00015006095	synj1	95	62.005	ENSOCUG00000001420	SYNJ1	95	62.714	Oryctolagus_cuniculus
ENSSFOG00015006095	synj1	96	74.635	ENSORLG00000004320	synj1	100	81.696	Oryzias_latipes
ENSSFOG00015006095	synj1	84	77.827	ENSORLG00020011994	synj1	99	78.646	Oryzias_latipes_hni
ENSSFOG00015006095	synj1	95	72.566	ENSORLG00015018077	synj1	94	75.111	Oryzias_latipes_hsok
ENSSFOG00015006095	synj1	95	73.896	ENSOMEG00000014322	synj1	99	77.843	Oryzias_melastigma
ENSSFOG00015006095	synj1	95	59.836	ENSOGAG00000006010	SYNJ1	93	61.509	Otolemur_garnettii
ENSSFOG00015006095	synj1	95	63.101	ENSOARG00000013414	SYNJ1	92	64.668	Ovis_aries
ENSSFOG00015006095	synj1	95	65.065	ENSPPAG00000026784	SYNJ1	100	70.545	Pan_paniscus
ENSSFOG00015006095	synj1	95	65.506	ENSPPRG00000023469	SYNJ1	99	70.846	Panthera_pardus
ENSSFOG00015006095	synj1	95	65.572	ENSPTIG00000007930	SYNJ1	99	70.920	Panthera_tigris_altaica
ENSSFOG00015006095	synj1	95	64.566	ENSPTRG00000023787	SYNJ1	100	71.979	Pan_troglodytes
ENSSFOG00015006095	synj1	95	65.130	ENSPTRG00000048135	-	100	71.979	Pan_troglodytes
ENSSFOG00015006095	synj1	95	65.337	ENSPANG00000022531	SYNJ1	100	70.398	Papio_anubis
ENSSFOG00015006095	synj1	70	91.026	ENSPKIG00000022603	synj1	95	87.554	Paramormyrops_kingsleyae
ENSSFOG00015006095	synj1	95	84.871	ENSPMGG00000016831	synj1	99	84.788	Periophthalmus_magnuspinnatus
ENSSFOG00015006095	synj1	79	70.666	ENSPEMG00000018767	Synj1	100	83.309	Peromyscus_maniculatus_bairdii
ENSSFOG00015006095	synj1	90	66.783	ENSPCIG00000016372	SYNJ1	99	68.429	Phascolarctos_cinereus
ENSSFOG00015006095	synj1	83	82.546	ENSPFOG00000016886	synj1	100	82.036	Poecilia_formosa
ENSSFOG00015006095	synj1	97	73.978	ENSPLAG00000017559	synj1	100	80.529	Poecilia_latipinna
ENSSFOG00015006095	synj1	97	74.148	ENSPMEG00000007643	synj1	98	74.644	Poecilia_mexicana
ENSSFOG00015006095	synj1	86	81.898	ENSPREG00000012412	synj1	100	81.947	Poecilia_reticulata
ENSSFOG00015006095	synj1	84	66.691	ENSPPYG00000011365	SYNJ1	95	69.209	Pongo_abelii
ENSSFOG00015006095	synj1	72	84.286	ENSPCAG00000009906	SYNJ1	67	84.286	Procavia_capensis
ENSSFOG00015006095	synj1	89	76.108	ENSPCOG00000024841	SYNJ1	93	76.108	Propithecus_coquereli
ENSSFOG00015006095	synj1	95	59.735	ENSPVAG00000000892	SYNJ1	95	62.013	Pteropus_vampyrus
ENSSFOG00015006095	synj1	100	74.307	ENSPNYG00000022989	synj1	100	82.969	Pundamilia_nyererei
ENSSFOG00015006095	synj1	70	88.818	ENSPNAG00000021119	synj1	91	88.171	Pygocentrus_nattereri
ENSSFOG00015006095	synj1	95	62.270	ENSRNOG00000002051	Synj1	99	71.536	Rattus_norvegicus
ENSSFOG00015006095	synj1	95	65.277	ENSRBIG00000034477	SYNJ1	100	70.398	Rhinopithecus_bieti
ENSSFOG00015006095	synj1	95	62.089	ENSRROG00000039256	SYNJ1	100	70.398	Rhinopithecus_roxellana
ENSSFOG00015006095	synj1	95	63.953	ENSSBOG00000021001	SYNJ1	100	70.250	Saimiri_boliviensis_boliviensis
ENSSFOG00015006095	synj1	91	64.057	ENSSHAG00000008538	SYNJ1	96	62.319	Sarcophilus_harrisii
ENSSFOG00015006095	synj1	100	73.691	ENSSMAG00000018066	synj1	98	80.832	Scophthalmus_maximus
ENSSFOG00015006095	synj1	100	73.238	ENSSDUG00000013058	synj1	90	79.416	Seriola_dumerili
ENSSFOG00015006095	synj1	100	72.939	ENSSLDG00000021406	synj1	100	82.870	Seriola_lalandi_dorsalis
ENSSFOG00015006095	synj1	67	79.330	ENSSARG00000009490	SYNJ1	69	79.330	Sorex_araneus
ENSSFOG00015006095	synj1	95	64.560	ENSSPUG00000012552	SYNJ1	94	64.544	Sphenodon_punctatus
ENSSFOG00015006095	synj1	89	77.809	ENSSPAG00000006812	SYNJ1	90	79.500	Stegastes_partitus
ENSSFOG00015006095	synj1	100	75.077	ENSSPAG00000017029	synj1	99	81.067	Stegastes_partitus
ENSSFOG00015006095	synj1	95	64.164	ENSSSCG00000012035	SYNJ1	99	70.864	Sus_scrofa
ENSSFOG00015006095	synj1	100	60.060	ENSTGUG00000013445	SYNJ1	100	61.887	Taeniopygia_guttata
ENSSFOG00015006095	synj1	99	73.698	ENSTRUG00000006907	synj1	97	78.728	Takifugu_rubripes
ENSSFOG00015006095	synj1	90	70.509	ENSTNIG00000009940	synj1	100	74.021	Tetraodon_nigroviridis
ENSSFOG00015006095	synj1	84	87.013	ENSTBEG00000016298	SYNJ1	78	87.013	Tupaia_belangeri
ENSSFOG00015006095	synj1	95	58.616	ENSTTRG00000002222	SYNJ1	95	58.488	Tursiops_truncatus
ENSSFOG00015006095	synj1	95	66.098	ENSUAMG00000018606	SYNJ1	98	80.508	Ursus_americanus
ENSSFOG00015006095	synj1	95	66.098	ENSUMAG00000018419	SYNJ1	99	80.042	Ursus_maritimus
ENSSFOG00015006095	synj1	86	82.857	ENSVPAG00000001241	SYNJ1	80	82.857	Vicugna_pacos
ENSSFOG00015006095	synj1	95	63.060	ENSVVUG00000023125	SYNJ1	99	69.642	Vulpes_vulpes
ENSSFOG00015006095	synj1	100	58.652	ENSXETG00000009899	synj1	95	60.766	Xenopus_tropicalis
ENSSFOG00015006095	synj1	83	81.484	ENSXCOG00000011896	synj1	99	81.694	Xiphophorus_couchianus
ENSSFOG00015006095	synj1	97	71.869	ENSXMAG00000017524	synj1	100	81.879	Xiphophorus_maculatus