EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015006108 (Gene tree)
Gene ID: 108928733
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF6-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7179 bases
Position: chrKV410892.1:3136110-3143288
Accession: 108928733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	1	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	2	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	3	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	4	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	5	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	6	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	7	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	8	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	9	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	10	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	11	12
ENSSFOP00015009380	zf-C2H2	PF00096.26	7.5e-67	12	12
ENSSFOP00015009380	zf-met	PF12874.7	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009508	-	4372	XM_018742804	ENSSFOP00015009380	697 (aa)	XP_018598320	A0A1W4ZC49

Gene Model

Click here to download ENSSFOG00015006108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015006108	-	56	43.125	ENSSFOG00015023669	-	89	43.125
ENSSFOG00015006108	-	60	47.525	ENSSFOG00015008994	znf236	65	47.525
ENSSFOG00015006108	-	58	37.952	ENSSFOG00015008114	-	55	37.952
ENSSFOG00015006108	-	56	40.000	ENSSFOG00015006928	zbtb26	52	40.000
ENSSFOG00015006108	-	56	50.000	ENSSFOG00015012223	sall3a	51	50.000
ENSSFOG00015006108	-	58	44.910	ENSSFOG00015023295	znf652	83	45.783
ENSSFOG00015006108	-	56	40.347	ENSSFOG00015021831	-	68	43.682
ENSSFOG00015006108	-	67	31.532	ENSSFOG00015013930	PRDM15	54	31.532
ENSSFOG00015006108	-	71	40.244	ENSSFOG00015021291	e4f1	58	40.244
ENSSFOG00015006108	-	56	48.339	ENSSFOG00015013448	-	83	48.339
ENSSFOG00015006108	-	99	47.159	ENSSFOG00015015958	-	99	37.571
ENSSFOG00015006108	-	59	35.989	ENSSFOG00015014778	znf526	53	35.989
ENSSFOG00015006108	-	63	31.336	ENSSFOG00015010128	ZNF521	74	31.336
ENSSFOG00015006108	-	57	37.602	ENSSFOG00015012089	ZNF319	95	37.602
ENSSFOG00015006108	-	58	36.000	ENSSFOG00015015427	znf366	56	36.000
ENSSFOG00015006108	-	55	36.429	ENSSFOG00015021578	snai1a	55	36.429
ENSSFOG00015006108	-	56	40.741	ENSSFOG00015011531	-	91	39.535
ENSSFOG00015006108	-	52	51.020	ENSSFOG00015001117	rreb1b	55	35.366
ENSSFOG00015006108	-	59	48.831	ENSSFOG00015010829	-	73	48.831
ENSSFOG00015006108	-	57	35.493	ENSSFOG00015020478	prdm5	75	35.493
ENSSFOG00015006108	-	56	40.141	ENSSFOG00015001195	SCRT1	56	40.141
ENSSFOG00015006108	-	59	50.877	ENSSFOG00015000652	ZNF775	84	50.877
ENSSFOG00015006108	-	62	44.615	ENSSFOG00015015878	-	92	44.615
ENSSFOG00015006108	-	57	32.222	ENSSFOG00015004064	-	53	32.222
ENSSFOG00015006108	-	58	37.198	ENSSFOG00015013244	patz1	50	36.697
ENSSFOG00015006108	-	57	32.653	ENSSFOG00015017155	-	86	32.653
ENSSFOG00015006108	-	64	42.105	ENSSFOG00015011566	gfi1b	74	42.105
ENSSFOG00015006108	-	99	57.468	ENSSFOG00015009678	-	100	57.468
ENSSFOG00015006108	-	58	52.332	ENSSFOG00015019818	-	88	50.000
ENSSFOG00015006108	-	58	47.590	ENSSFOG00015020993	-	85	47.590
ENSSFOG00015006108	-	60	32.911	ENSSFOG00015004737	si:dkey-89b17.4	99	32.911
ENSSFOG00015006108	-	56	52.459	ENSSFOG00015005557	-	60	52.459
ENSSFOG00015006108	-	57	37.195	ENSSFOG00015021699	si:ch211-166g5.4	71	34.146
ENSSFOG00015006108	-	58	41.481	ENSSFOG00015018025	SNAI2	53	41.481
ENSSFOG00015006108	-	57	47.959	ENSSFOG00015008577	-	98	45.833
ENSSFOG00015006108	-	58	39.130	ENSSFOG00015016115	snai3	52	39.130
ENSSFOG00015006108	-	58	47.842	ENSSFOG00015015384	-	85	47.842
ENSSFOG00015006108	-	63	33.645	ENSSFOG00015007599	ZNF521	73	30.603
ENSSFOG00015006108	-	59	32.061	ENSSFOG00015014678	znf341	52	32.061
ENSSFOG00015006108	-	56	42.308	ENSSFOG00015021176	-	51	42.308
ENSSFOG00015006108	-	59	43.132	ENSSFOG00015003121	znf668	85	43.132
ENSSFOG00015006108	-	99	43.741	ENSSFOG00015006083	-	99	42.936
ENSSFOG00015006108	-	58	45.665	ENSSFOG00015012207	-	81	45.665

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006108	-	99	48.095	ENSAPOG00000013511	-	92	48.095	Acanthochromis_polyacanthus
ENSSFOG00015006108	-	56	41.711	ENSAPOG00000004328	-	86	41.711	Acanthochromis_polyacanthus
ENSSFOG00015006108	-	59	37.389	ENSACIG00000010739	-	84	37.389	Amphilophus_citrinellus
ENSSFOG00015006108	-	67	41.146	ENSAOCG00000007045	-	82	41.146	Amphiprion_ocellaris
ENSSFOG00015006108	-	67	41.600	ENSAPEG00000001596	-	79	42.857	Amphiprion_percula
ENSSFOG00015006108	-	99	45.064	ENSAPEG00000016483	-	96	45.064	Amphiprion_percula
ENSSFOG00015006108	-	65	41.444	ENSATEG00000006085	-	84	41.444	Anabas_testudineus
ENSSFOG00015006108	-	59	50.259	ENSACAG00000000082	-	99	50.259	Anolis_carolinensis
ENSSFOG00015006108	-	57	48.540	ENSACAG00000025537	-	96	48.540	Anolis_carolinensis
ENSSFOG00015006108	-	62	51.667	ENSAMXG00000026143	-	96	51.667	Astyanax_mexicanus
ENSSFOG00015006108	-	60	59.245	ENSAMXG00000035949	-	86	59.245	Astyanax_mexicanus
ENSSFOG00015006108	-	60	59.070	ENSAMXG00000035145	-	66	59.070	Astyanax_mexicanus
ENSSFOG00015006108	-	56	51.639	ENSAMXG00000036257	-	91	51.639	Astyanax_mexicanus
ENSSFOG00015006108	-	58	52.448	ENSAMXG00000032237	-	93	52.448	Astyanax_mexicanus
ENSSFOG00015006108	-	58	49.808	ENSAMXG00000012873	-	92	49.808	Astyanax_mexicanus
ENSSFOG00015006108	-	58	53.271	ENSAMXG00000033013	-	85	52.752	Astyanax_mexicanus
ENSSFOG00015006108	-	65	41.299	ENSCVAG00000011235	-	89	41.299	Cyprinodon_variegatus
ENSSFOG00015006108	-	58	48.910	ENSELUG00000013357	-	82	48.910	Esox_lucius
ENSSFOG00015006108	-	58	44.853	ENSELUG00000013844	-	88	39.062	Esox_lucius
ENSSFOG00015006108	-	56	45.780	ENSELUG00000021287	-	77	45.780	Esox_lucius
ENSSFOG00015006108	-	59	59.343	ENSFHEG00000019915	-	75	59.343	Fundulus_heteroclitus
ENSSFOG00015006108	-	56	49.057	ENSGMOG00000003238	-	99	49.057	Gadus_morhua
ENSSFOG00015006108	-	100	44.706	ENSGAFG00000003150	-	88	57.995	Gambusia_affinis
ENSSFOG00015006108	-	59	42.338	ENSGAFG00000012977	-	96	42.338	Gambusia_affinis
ENSSFOG00015006108	-	59	54.774	ENSIPUG00000021556	-	83	54.774	Ictalurus_punctatus
ENSSFOG00015006108	-	56	51.613	ENSIPUG00000004428	-	75	51.613	Ictalurus_punctatus
ENSSFOG00015006108	-	59	51.813	ENSIPUG00000006916	-	76	51.813	Ictalurus_punctatus
ENSSFOG00015006108	-	59	41.944	ENSKMAG00000004988	-	86	41.944	Kryptolebias_marmoratus
ENSSFOG00015006108	-	58	43.831	ENSLOCG00000014366	-	94	46.763	Lepisosteus_oculatus
ENSSFOG00015006108	-	61	44.375	ENSLOCG00000014144	-	100	44.375	Lepisosteus_oculatus
ENSSFOG00015006108	-	99	44.921	ENSMAMG00000016542	-	99	44.921	Mastacembelus_armatus
ENSSFOG00015006108	-	67	42.386	ENSMAMG00000019301	-	94	48.214	Mastacembelus_armatus
ENSSFOG00015006108	-	58	42.767	ENSMMOG00000009852	-	86	42.767	Mola_mola
ENSSFOG00015006108	-	59	62.388	ENSMALG00000005554	-	88	62.388	Monopterus_albus
ENSSFOG00015006108	-	58	41.067	ENSOCUG00000005876	-	100	44.058	Oryctolagus_cuniculus
ENSSFOG00015006108	-	99	67.468	ENSPKIG00000006616	-	100	67.468	Paramormyrops_kingsleyae
ENSSFOG00015006108	-	57	40.049	ENSPMGG00000017633	-	93	40.049	Periophthalmus_magnuspinnatus
ENSSFOG00015006108	-	59	41.558	ENSPFOG00000010682	-	99	38.683	Poecilia_formosa
ENSSFOG00015006108	-	56	42.295	ENSPLAG00000002892	-	69	42.458	Poecilia_latipinna
ENSSFOG00015006108	-	59	41.558	ENSPMEG00000001399	-	89	41.558	Poecilia_mexicana
ENSSFOG00015006108	-	59	41.818	ENSPREG00000001386	-	89	41.818	Poecilia_reticulata
ENSSFOG00015006108	-	61	41.702	ENSPREG00000002582	-	61	41.702	Poecilia_reticulata
ENSSFOG00015006108	-	61	55.417	ENSPNAG00000015116	-	74	55.417	Pygocentrus_nattereri
ENSSFOG00015006108	-	56	48.949	ENSPNAG00000000219	-	90	51.452	Pygocentrus_nattereri
ENSSFOG00015006108	-	59	44.643	ENSPNAG00000025570	-	79	44.643	Pygocentrus_nattereri
ENSSFOG00015006108	-	52	59.615	ENSSMAG00000009115	-	91	59.615	Scophthalmus_maximus
ENSSFOG00015006108	-	99	45.442	ENSSDUG00000002195	-	94	55.776	Seriola_dumerili
ENSSFOG00015006108	-	67	42.386	ENSSDUG00000006463	-	85	42.386	Seriola_dumerili
ENSSFOG00015006108	-	57	48.936	ENSSLDG00000020727	-	99	45.455	Seriola_lalandi_dorsalis
ENSSFOG00015006108	-	59	48.824	ENSSLDG00000006724	-	92	48.824	Seriola_lalandi_dorsalis
ENSSFOG00015006108	-	57	46.988	ENSSPAG00000012960	-	81	46.988	Stegastes_partitus
ENSSFOG00015006108	-	56	58.763	ENSSPAG00000021008	-	89	58.763	Stegastes_partitus
ENSSFOG00015006108	-	99	55.870	ENSTRUG00000005321	-	97	54.478	Takifugu_rubripes
ENSSFOG00015006108	-	56	36.790	ENSTRUG00000021675	-	69	36.790	Takifugu_rubripes
ENSSFOG00015006108	-	56	49.772	ENSTNIG00000000320	-	100	49.554	Tetraodon_nigroviridis
ENSSFOG00015006108	-	58	40.798	ENSTNIG00000008200	-	100	40.798	Tetraodon_nigroviridis
ENSSFOG00015006108	-	59	49.498	ENSXETG00000006575	znf420	77	48.964	Xenopus_tropicalis
ENSSFOG00015006108	-	56	54.023	ENSXCOG00000009665	-	93	54.023	Xiphophorus_couchianus
ENSSFOG00015006108	-	59	41.818	ENSXMAG00000028625	-	89	41.818	Xiphophorus_maculatus