EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015006128 (Gene tree)
Gene ID: 108927801
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2893 bases
Position: chrKV410874.1:752746-755638
Accession: 108927801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009429	Sua5_yciO_yrdC	PF01300.18	2.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009557	-	702	XM_018741361	ENSSFOP00015009429	233 (aa)	XP_018596877	-

Gene Model

Click here to download ENSSFOG00015006128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006128	yrdc	91	63.679	ENSG00000196449	YRDC	76	63.679	Homo_sapiens
ENSSFOG00015006128	yrdc	90	73.684	ENSAPOG00000024293	yrdc	79	73.684	Acanthochromis_polyacanthus
ENSSFOG00015006128	yrdc	79	68.478	ENSAMEG00000001173	YRDC	98	68.478	Ailuropoda_melanoleuca
ENSSFOG00015006128	yrdc	91	73.460	ENSACIG00000017330	yrdc	78	73.460	Amphilophus_citrinellus
ENSSFOG00015006128	yrdc	90	74.641	ENSAOCG00000021647	yrdc	79	74.641	Amphiprion_ocellaris
ENSSFOG00015006128	yrdc	90	74.641	ENSAPEG00000006164	yrdc	79	74.641	Amphiprion_percula
ENSSFOG00015006128	yrdc	88	74.272	ENSATEG00000010086	yrdc	77	74.272	Anabas_testudineus
ENSSFOG00015006128	yrdc	83	63.918	ENSACAG00000017203	YRDC	97	62.621	Anolis_carolinensis
ENSSFOG00015006128	yrdc	91	60.280	ENSANAG00000031052	-	78	60.280	Aotus_nancymaae
ENSSFOG00015006128	yrdc	90	63.333	ENSANAG00000028788	-	89	63.333	Aotus_nancymaae
ENSSFOG00015006128	yrdc	88	75.243	ENSACLG00000027775	yrdc	76	75.243	Astatotilapia_calliptera
ENSSFOG00015006128	yrdc	93	72.146	ENSAMXG00000037791	yrdc	81	75.253	Astyanax_mexicanus
ENSSFOG00015006128	yrdc	88	64.563	ENSBTAG00000006510	YRDC	74	64.563	Bos_taurus
ENSSFOG00015006128	yrdc	85	37.619	WBGene00012997	Y48C3A.18	93	39.130	Caenorhabditis_elegans
ENSSFOG00015006128	yrdc	91	63.208	ENSCJAG00000002078	YRDC	58	63.208	Callithrix_jacchus
ENSSFOG00015006128	yrdc	88	65.049	ENSCAFG00000003253	YRDC	75	65.049	Canis_familiaris
ENSSFOG00015006128	yrdc	88	66.019	ENSCAFG00020007843	YRDC	75	66.019	Canis_lupus_dingo
ENSSFOG00015006128	yrdc	88	64.078	ENSCHIG00000007882	YRDC	74	64.078	Capra_hircus
ENSSFOG00015006128	yrdc	75	64.571	ENSTSYG00000005555	YRDC	63	64.571	Carlito_syrichta
ENSSFOG00015006128	yrdc	88	64.078	ENSCPOG00000036144	YRDC	73	64.078	Cavia_porcellus
ENSSFOG00015006128	yrdc	91	63.208	ENSCCAG00000028891	YRDC	76	63.208	Cebus_capucinus
ENSSFOG00015006128	yrdc	91	61.792	ENSCATG00000036928	YRDC	76	63.679	Cercocebus_atys
ENSSFOG00015006128	yrdc	82	67.358	ENSCLAG00000015012	YRDC	73	64.563	Chinchilla_lanigera
ENSSFOG00015006128	yrdc	91	61.792	ENSCSAG00000001116	YRDC	76	63.679	Chlorocebus_sabaeus
ENSSFOG00015006128	yrdc	61	60.284	ENSCHOG00000005500	YRDC	67	60.284	Choloepus_hoffmanni
ENSSFOG00015006128	yrdc	88	65.700	ENSCPBG00000018446	YRDC	88	65.700	Chrysemys_picta_bellii
ENSSFOG00015006128	yrdc	87	50.943	ENSCING00000007564	-	97	50.943	Ciona_intestinalis
ENSSFOG00015006128	yrdc	87	50.000	ENSCSAVG00000009982	-	97	50.000	Ciona_savignyi
ENSSFOG00015006128	yrdc	91	61.321	ENSCANG00000031111	YRDC	76	63.208	Colobus_angolensis_palliatus
ENSSFOG00015006128	yrdc	88	63.107	ENSCGRG00001014496	-	74	63.107	Cricetulus_griseus_chok1gshd
ENSSFOG00015006128	yrdc	88	56.311	ENSCGRG00001000829	-	57	56.311	Cricetulus_griseus_chok1gshd
ENSSFOG00015006128	yrdc	51	65.833	ENSCGRG00000001307	-	94	65.833	Cricetulus_griseus_crigri
ENSSFOG00015006128	yrdc	89	72.596	ENSCSEG00000019075	yrdc	75	72.596	Cynoglossus_semilaevis
ENSSFOG00015006128	yrdc	92	70.561	ENSCVAG00000017355	yrdc	80	70.561	Cyprinodon_variegatus
ENSSFOG00015006128	yrdc	98	65.812	ENSDARG00000041428	yrdc	98	65.812	Danio_rerio
ENSSFOG00015006128	yrdc	82	50.769	ENSDNOG00000036198	-	94	50.769	Dasypus_novemcinctus
ENSSFOG00015006128	yrdc	88	62.136	ENSDNOG00000038789	-	74	62.434	Dasypus_novemcinctus
ENSSFOG00015006128	yrdc	81	67.368	ENSDORG00000008788	Yrdc	84	67.368	Dipodomys_ordii
ENSSFOG00015006128	yrdc	87	48.058	FBgn0061361	CG33786	83	48.058	Drosophila_melanogaster
ENSSFOG00015006128	yrdc	88	47.573	ENSETEG00000003442	YRDC	74	47.573	Echinops_telfairi
ENSSFOG00015006128	yrdc	91	51.643	ENSEBUG00000014080	yrdc	88	51.643	Eptatretus_burgeri
ENSSFOG00015006128	yrdc	88	65.534	ENSEASG00005012253	YRDC	74	65.534	Equus_asinus_asinus
ENSSFOG00015006128	yrdc	88	65.534	ENSECAG00000022522	YRDC	74	65.534	Equus_caballus
ENSSFOG00015006128	yrdc	90	75.598	ENSELUG00000018071	yrdc	68	75.598	Esox_lucius
ENSSFOG00015006128	yrdc	88	63.592	ENSFCAG00000011018	YRDC	74	63.592	Felis_catus
ENSSFOG00015006128	yrdc	83	65.979	ENSFALG00000000964	YRDC	90	65.482	Ficedula_albicollis
ENSSFOG00015006128	yrdc	84	30.097	ENSFALG00000011333	-	54	30.097	Ficedula_albicollis
ENSSFOG00015006128	yrdc	93	69.585	ENSFHEG00000001029	yrdc	79	70.854	Fundulus_heteroclitus
ENSSFOG00015006128	yrdc	90	74.641	ENSGMOG00000015635	yrdc	100	74.641	Gadus_morhua
ENSSFOG00015006128	yrdc	86	67.164	ENSGALG00000029001	YRDC	79	67.164	Gallus_gallus
ENSSFOG00015006128	yrdc	89	71.635	ENSGAFG00000008396	yrdc	77	71.635	Gambusia_affinis
ENSSFOG00015006128	yrdc	91	72.897	ENSGACG00000013878	yrdc	86	73.810	Gasterosteus_aculeatus
ENSSFOG00015006128	yrdc	88	66.184	ENSGAGG00000014968	YRDC	90	66.184	Gopherus_agassizii
ENSSFOG00015006128	yrdc	91	63.679	ENSGGOG00000007619	YRDC	76	63.679	Gorilla_gorilla
ENSSFOG00015006128	yrdc	88	75.728	ENSHBUG00000009298	yrdc	76	75.728	Haplochromis_burtoni
ENSSFOG00015006128	yrdc	88	63.592	ENSHGLG00000014075	YRDC	73	63.592	Heterocephalus_glaber_female
ENSSFOG00015006128	yrdc	87	64.216	ENSHGLG00100002734	YRDC	74	64.216	Heterocephalus_glaber_male
ENSSFOG00015006128	yrdc	92	70.233	ENSHCOG00000006598	yrdc	84	70.233	Hippocampus_comes
ENSSFOG00015006128	yrdc	92	72.430	ENSIPUG00000014985	yrdc	87	72.430	Ictalurus_punctatus
ENSSFOG00015006128	yrdc	88	64.563	ENSSTOG00000001643	YRDC	74	64.563	Ictidomys_tridecemlineatus
ENSSFOG00015006128	yrdc	91	71.564	ENSKMAG00000013468	yrdc	78	71.564	Kryptolebias_marmoratus
ENSSFOG00015006128	yrdc	93	75.115	ENSLBEG00000027501	yrdc	80	75.115	Labrus_bergylta
ENSSFOG00015006128	yrdc	84	30.476	ENSLACG00000017624	si:ch211-153b23.3	63	30.476	Latimeria_chalumnae
ENSSFOG00015006128	yrdc	89	65.865	ENSLACG00000010689	YRDC	96	65.865	Latimeria_chalumnae
ENSSFOG00015006128	yrdc	91	71.226	ENSLOCG00000003321	yrdc	87	71.226	Lepisosteus_oculatus
ENSSFOG00015006128	yrdc	88	64.078	ENSLAFG00000017556	YRDC	74	64.078	Loxodonta_africana
ENSSFOG00015006128	yrdc	90	62.085	ENSMFAG00000003487	YRDC	99	63.981	Macaca_fascicularis
ENSSFOG00015006128	yrdc	91	61.792	ENSMMUG00000005372	YRDC	57	63.679	Macaca_mulatta
ENSSFOG00015006128	yrdc	91	61.792	ENSMNEG00000029348	YRDC	76	63.679	Macaca_nemestrina
ENSSFOG00015006128	yrdc	64	66.000	ENSMLEG00000041122	YRDC	99	68.667	Mandrillus_leucophaeus
ENSSFOG00015006128	yrdc	88	74.757	ENSMAMG00000007315	yrdc	76	74.757	Mastacembelus_armatus
ENSSFOG00015006128	yrdc	88	75.243	ENSMZEG00005006948	yrdc	76	75.243	Maylandia_zebra
ENSSFOG00015006128	yrdc	86	66.667	ENSMGAG00000002833	YRDC	98	66.667	Meleagris_gallopavo
ENSSFOG00015006128	yrdc	88	64.563	ENSMICG00000031688	YRDC	74	64.563	Microcebus_murinus
ENSSFOG00015006128	yrdc	61	59.155	ENSMOCG00000000164	-	55	59.155	Microtus_ochrogaster
ENSSFOG00015006128	yrdc	91	72.038	ENSMMOG00000002119	yrdc	79	72.038	Mola_mola
ENSSFOG00015006128	yrdc	88	63.107	ENSMODG00000017750	YRDC	73	63.107	Monodelphis_domestica
ENSSFOG00015006128	yrdc	89	77.295	ENSMALG00000012471	yrdc	78	77.295	Monopterus_albus
ENSSFOG00015006128	yrdc	81	64.550	MGP_CAROLIEiJ_G0026453	Yrdc	98	69.903	Mus_caroli
ENSSFOG00015006128	yrdc	88	63.107	ENSMUSG00000028889	Yrdc	100	69.524	Mus_musculus
ENSSFOG00015006128	yrdc	88	63.592	MGP_PahariEiJ_G0028784	Yrdc	100	69.524	Mus_pahari
ENSSFOG00015006128	yrdc	88	63.107	MGP_SPRETEiJ_G0027432	Yrdc	74	63.107	Mus_spretus
ENSSFOG00015006128	yrdc	94	62.443	ENSMPUG00000014542	YRDC	87	62.443	Mustela_putorius_furo
ENSSFOG00015006128	yrdc	88	54.634	ENSMLUG00000028796	-	73	54.634	Myotis_lucifugus
ENSSFOG00015006128	yrdc	86	61.692	ENSMLUG00000024310	-	99	61.692	Myotis_lucifugus
ENSSFOG00015006128	yrdc	88	64.563	ENSMLUG00000000955	-	74	64.563	Myotis_lucifugus
ENSSFOG00015006128	yrdc	88	63.592	ENSNGAG00000019099	Yrdc	74	63.592	Nannospalax_galili
ENSSFOG00015006128	yrdc	91	72.986	ENSNBRG00000009475	yrdc	78	72.986	Neolamprologus_brichardi
ENSSFOG00015006128	yrdc	90	64.286	ENSNLEG00000011665	YRDC	76	64.286	Nomascus_leucogenys
ENSSFOG00015006128	yrdc	88	63.592	ENSMEUG00000005068	YRDC	96	63.592	Notamacropus_eugenii
ENSSFOG00015006128	yrdc	88	64.078	ENSODEG00000007401	YRDC	100	68.571	Octodon_degus
ENSSFOG00015006128	yrdc	91	73.934	ENSONIG00000016213	yrdc	88	73.934	Oreochromis_niloticus
ENSSFOG00015006128	yrdc	88	64.878	ENSOCUG00000005384	YRDC	70	64.878	Oryctolagus_cuniculus
ENSSFOG00015006128	yrdc	90	72.249	ENSORLG00000014393	yrdc	78	72.249	Oryzias_latipes
ENSSFOG00015006128	yrdc	90	71.292	ENSORLG00020019663	yrdc	78	71.292	Oryzias_latipes_hni
ENSSFOG00015006128	yrdc	90	71.292	ENSORLG00015004625	yrdc	78	71.292	Oryzias_latipes_hsok
ENSSFOG00015006128	yrdc	95	68.326	ENSOMEG00000018550	yrdc	83	68.326	Oryzias_melastigma
ENSSFOG00015006128	yrdc	88	64.078	ENSOGAG00000030474	YRDC	75	64.078	Otolemur_garnettii
ENSSFOG00015006128	yrdc	88	64.078	ENSOARG00000019873	YRDC	73	64.078	Ovis_aries
ENSSFOG00015006128	yrdc	63	68.243	ENSPPAG00000039722	-	99	68.243	Pan_paniscus
ENSSFOG00015006128	yrdc	88	64.078	ENSPPRG00000007752	YRDC	74	64.078	Panthera_pardus
ENSSFOG00015006128	yrdc	64	66.225	ENSPTIG00000019821	YRDC	65	66.225	Panthera_tigris_altaica
ENSSFOG00015006128	yrdc	91	63.679	ENSPTRG00000000557	YRDC	76	63.679	Pan_troglodytes
ENSSFOG00015006128	yrdc	91	61.792	ENSPANG00000006487	YRDC	57	63.679	Papio_anubis
ENSSFOG00015006128	yrdc	89	75.481	ENSPKIG00000004574	yrdc	76	75.481	Paramormyrops_kingsleyae
ENSSFOG00015006128	yrdc	87	67.157	ENSPSIG00000006483	YRDC	72	67.157	Pelodiscus_sinensis
ENSSFOG00015006128	yrdc	91	70.283	ENSPMGG00000004184	yrdc	81	70.283	Periophthalmus_magnuspinnatus
ENSSFOG00015006128	yrdc	74	64.162	ENSPEMG00000016985	Yrdc	94	54.091	Peromyscus_maniculatus_bairdii
ENSSFOG00015006128	yrdc	79	56.216	ENSPMAG00000002905	yrdc	100	56.216	Petromyzon_marinus
ENSSFOG00015006128	yrdc	88	62.621	ENSPCIG00000025731	YRDC	72	64.737	Phascolarctos_cinereus
ENSSFOG00015006128	yrdc	94	69.266	ENSPFOG00000023097	yrdc	81	69.266	Poecilia_formosa
ENSSFOG00015006128	yrdc	94	68.349	ENSPLAG00000020882	yrdc	81	68.349	Poecilia_latipinna
ENSSFOG00015006128	yrdc	94	69.266	ENSPMEG00000013237	yrdc	81	69.266	Poecilia_mexicana
ENSSFOG00015006128	yrdc	94	69.266	ENSPREG00000005285	yrdc	81	69.266	Poecilia_reticulata
ENSSFOG00015006128	yrdc	88	65.049	ENSPPYG00000001523	-	84	65.049	Pongo_abelii
ENSSFOG00015006128	yrdc	88	63.107	ENSPCAG00000016850	YRDC	74	63.107	Procavia_capensis
ENSSFOG00015006128	yrdc	88	64.563	ENSPCOG00000013214	YRDC	74	64.563	Propithecus_coquereli
ENSSFOG00015006128	yrdc	89	64.593	ENSPVAG00000010147	YRDC	75	64.593	Pteropus_vampyrus
ENSSFOG00015006128	yrdc	88	75.243	ENSPNYG00000013956	yrdc	76	75.243	Pundamilia_nyererei
ENSSFOG00015006128	yrdc	82	78.421	ENSPNAG00000015625	yrdc	77	78.421	Pygocentrus_nattereri
ENSSFOG00015006128	yrdc	88	63.107	ENSRNOG00000025424	Yrdc	74	63.107	Rattus_norvegicus
ENSSFOG00015006128	yrdc	91	61.321	ENSRBIG00000032289	YRDC	76	63.208	Rhinopithecus_bieti
ENSSFOG00015006128	yrdc	93	60.829	ENSRROG00000039370	YRDC	74	62.673	Rhinopithecus_roxellana
ENSSFOG00015006128	yrdc	97	60.088	ENSSBOG00000018937	YRDC	97	60.088	Saimiri_boliviensis_boliviensis
ENSSFOG00015006128	yrdc	62	66.897	ENSSHAG00000013957	-	98	66.897	Sarcophilus_harrisii
ENSSFOG00015006128	yrdc	90	72.381	ENSSMAG00000005195	yrdc	79	72.381	Scophthalmus_maximus
ENSSFOG00015006128	yrdc	58	33.803	ENSSDUG00000006631	-	66	33.088	Seriola_dumerili
ENSSFOG00015006128	yrdc	94	71.233	ENSSDUG00000009775	yrdc	81	71.233	Seriola_dumerili
ENSSFOG00015006128	yrdc	61	34.667	ENSSDUG00000006736	-	77	34.667	Seriola_dumerili
ENSSFOG00015006128	yrdc	54	32.812	ENSSLDG00000008694	-	62	32.812	Seriola_lalandi_dorsalis
ENSSFOG00015006128	yrdc	94	71.233	ENSSLDG00000003196	yrdc	81	71.233	Seriola_lalandi_dorsalis
ENSSFOG00015006128	yrdc	87	68.966	ENSSPUG00000003946	YRDC	79	68.966	Sphenodon_punctatus
ENSSFOG00015006128	yrdc	90	72.727	ENSSPAG00000012559	yrdc	78	72.727	Stegastes_partitus
ENSSFOG00015006128	yrdc	88	65.049	ENSSSCG00000040425	YRDC	73	65.049	Sus_scrofa
ENSSFOG00015006128	yrdc	63	68.027	ENSTGUG00000001507	YRDC	100	68.027	Taeniopygia_guttata
ENSSFOG00015006128	yrdc	89	70.192	ENSTRUG00000005923	yrdc	81	68.610	Takifugu_rubripes
ENSSFOG00015006128	yrdc	66	66.883	ENSTBEG00000008863	YRDC	98	66.883	Tupaia_belangeri
ENSSFOG00015006128	yrdc	61	69.014	ENSTTRG00000013538	-	95	69.014	Tursiops_truncatus
ENSSFOG00015006128	yrdc	84	69.388	ENSUAMG00000006150	YRDC	97	69.388	Ursus_americanus
ENSSFOG00015006128	yrdc	88	49.515	ENSVPAG00000006642	YRDC	88	49.515	Vicugna_pacos
ENSSFOG00015006128	yrdc	89	66.346	ENSXETG00000014420	yrdc	87	66.346	Xenopus_tropicalis
ENSSFOG00015006128	yrdc	94	66.972	ENSXCOG00000000829	yrdc	90	66.972	Xiphophorus_couchianus
ENSSFOG00015006128	yrdc	94	67.890	ENSXMAG00000014606	yrdc	76	67.890	Xiphophorus_maculatus