EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015006245 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4426 bases
Position: chrKV411278.1:4241705-4246130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009857	MMR_HSR1	PF01926.23	5.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009993	-	612	-	ENSSFOP00015009857	203 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015006245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015006245	-	96	38.785	ENSSFOG00015001293	rab1ab	99	38.785
ENSSFOG00015006245	-	94	31.308	ENSSFOG00015010492	rab9b	98	31.308
ENSSFOG00015006245	-	74	43.195	ENSSFOG00015020836	rab1ba	83	43.195
ENSSFOG00015006245	-	100	61.468	ENSSFOG00015024042	rab11a	100	61.468
ENSSFOG00015006245	-	96	37.037	ENSSFOG00015005464	zgc:171927	97	37.037
ENSSFOG00015006245	-	70	33.721	ENSSFOG00015021180	RAB7A	78	33.721
ENSSFOG00015006245	-	100	73.853	ENSSFOG00015009042	rab11bb	100	73.853
ENSSFOG00015006245	-	70	33.721	ENSSFOG00015005076	zgc:100918	79	33.721
ENSSFOG00015006245	-	75	39.181	ENSSFOG00015015336	rab4a	80	39.181
ENSSFOG00015006245	-	94	32.367	ENSSFOG00015014517	rab5a	90	32.367
ENSSFOG00015006245	-	79	35.196	ENSSFOG00015017296	rab15	82	35.196
ENSSFOG00015006245	-	75	40.000	ENSSFOG00015011318	-	78	40.000
ENSSFOG00015006245	-	70	34.302	ENSSFOG00015020012	rab7a	78	34.302
ENSSFOG00015006245	-	99	57.269	ENSSFOG00015008618	rab11al	99	57.269
ENSSFOG00015006245	-	70	33.140	ENSSFOG00015011771	-	79	33.140
ENSSFOG00015006245	-	70	31.250	ENSSFOG00015012085	rab22a	81	31.250
ENSSFOG00015006245	-	82	30.159	ENSSFOG00015012088	rab42	83	30.159
ENSSFOG00015006245	-	77	40.909	ENSSFOG00015000865	-	83	41.358
ENSSFOG00015006245	-	76	35.227	ENSSFOG00015003259	rab9a	82	35.227
ENSSFOG00015006245	-	77	31.429	ENSSFOG00015006175	zgc:101559	74	31.429
ENSSFOG00015006245	-	74	37.209	ENSSFOG00015000053	rab9a	78	37.209
ENSSFOG00015006245	-	72	32.099	ENSSFOG00015009988	-	73	32.099
ENSSFOG00015006245	-	79	33.158	ENSSFOG00015003628	-	83	33.158
ENSSFOG00015006245	-	78	36.667	ENSSFOG00015021754	rab13	87	36.667
ENSSFOG00015006245	-	77	37.342	ENSSFOG00015009244	rab39bb	77	37.342
ENSSFOG00015006245	-	77	39.306	ENSSFOG00015015034	rab2a	81	39.306
ENSSFOG00015006245	-	81	31.633	ENSSFOG00015020732	rab42a	85	31.633
ENSSFOG00015006245	-	75	40.000	ENSSFOG00015012785	rab14	78	40.000
ENSSFOG00015006245	-	99	38.182	ENSSFOG00015011140	-	100	38.182
ENSSFOG00015006245	-	96	32.857	ENSSFOG00015021448	-	98	32.857
ENSSFOG00015006245	-	81	36.598	ENSSFOG00015018421	rab39b	83	35.829
ENSSFOG00015006245	-	94	31.884	ENSSFOG00015021115	-	90	31.884
ENSSFOG00015006245	-	100	47.059	ENSSFOG00015008657	rab25a	100	47.059
ENSSFOG00015006245	-	78	34.254	ENSSFOG00015016000	-	82	34.254
ENSSFOG00015006245	-	74	38.554	ENSSFOG00015006076	rab35	99	34.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006245	-	100	75.229	ENSAPOG00000023455	rab11bb	100	75.229	Acanthochromis_polyacanthus
ENSSFOG00015006245	-	100	73.853	ENSACIG00000024376	-	100	73.853	Amphilophus_citrinellus
ENSSFOG00015006245	-	100	65.138	ENSACIG00000019631	rab11bb	100	65.138	Amphilophus_citrinellus
ENSSFOG00015006245	-	100	73.853	ENSAOCG00000018849	-	100	73.853	Amphiprion_ocellaris
ENSSFOG00015006245	-	100	75.229	ENSAOCG00000018239	rab11bb	100	75.229	Amphiprion_ocellaris
ENSSFOG00015006245	-	100	75.229	ENSAPEG00000016590	rab11bb	100	75.229	Amphiprion_percula
ENSSFOG00015006245	-	100	75.229	ENSATEG00000017696	rab11bb	100	75.229	Anabas_testudineus
ENSSFOG00015006245	-	100	74.312	ENSATEG00000023725	-	100	74.312	Anabas_testudineus
ENSSFOG00015006245	-	94	72.816	ENSAPLG00000011046	-	94	72.816	Anas_platyrhynchos
ENSSFOG00015006245	-	100	75.229	ENSACLG00000007076	rab11bb	100	75.229	Astatotilapia_calliptera
ENSSFOG00015006245	-	100	73.853	ENSACLG00000005446	-	100	73.853	Astatotilapia_calliptera
ENSSFOG00015006245	-	100	72.936	ENSAMXG00000037623	-	100	72.936	Astyanax_mexicanus
ENSSFOG00015006245	-	100	74.771	ENSAMXG00000042655	rab11bb	100	74.771	Astyanax_mexicanus
ENSSFOG00015006245	-	100	72.936	ENSBTAG00000002475	RAB11B	100	72.936	Bos_taurus
ENSSFOG00015006245	-	96	70.616	ENSCHIG00000022426	-	94	70.616	Capra_hircus
ENSSFOG00015006245	-	100	72.936	ENSCATG00000029188	-	100	72.936	Cercocebus_atys
ENSSFOG00015006245	-	100	73.394	ENSCPBG00000017056	-	100	73.394	Chrysemys_picta_bellii
ENSSFOG00015006245	-	100	75.229	ENSCSEG00000012149	rab11bb	100	75.229	Cynoglossus_semilaevis
ENSSFOG00015006245	-	100	73.394	ENSCSEG00000007239	-	100	73.394	Cynoglossus_semilaevis
ENSSFOG00015006245	-	100	72.936	ENSCVAG00000019718	-	100	72.936	Cyprinodon_variegatus
ENSSFOG00015006245	-	100	70.642	ENSCVAG00000019751	-	100	70.642	Cyprinodon_variegatus
ENSSFOG00015006245	-	100	75.229	ENSCVAG00000017021	-	100	75.229	Cyprinodon_variegatus
ENSSFOG00015006245	-	100	73.394	ENSDARG00000090086	rab11bb	100	73.394	Danio_rerio
ENSSFOG00015006245	-	99	71.429	ENSETEG00000000905	-	99	71.429	Echinops_telfairi
ENSSFOG00015006245	-	99	70.270	ENSEASG00005003708	-	99	70.270	Equus_asinus_asinus
ENSSFOG00015006245	-	99	70.270	ENSECAG00000000716	RAB11B	99	70.270	Equus_caballus
ENSSFOG00015006245	-	100	72.477	ENSELUG00000020948	-	99	72.477	Esox_lucius
ENSSFOG00015006245	-	100	73.394	ENSELUG00000021148	rab11bb	100	73.394	Esox_lucius
ENSSFOG00015006245	-	100	71.560	ENSELUG00000000916	-	100	71.560	Esox_lucius
ENSSFOG00015006245	-	100	73.394	ENSFALG00000011828	-	100	73.394	Ficedula_albicollis
ENSSFOG00015006245	-	100	75.229	ENSFHEG00000018353	rab11bb	100	75.229	Fundulus_heteroclitus
ENSSFOG00015006245	-	100	74.312	ENSFHEG00000022676	-	100	74.312	Fundulus_heteroclitus
ENSSFOG00015006245	-	100	74.771	ENSGMOG00000009211	rab11bb	100	74.771	Gadus_morhua
ENSSFOG00015006245	-	99	70.370	ENSGMOG00000009668	-	99	70.370	Gadus_morhua
ENSSFOG00015006245	-	100	73.394	ENSGALG00000000613	RAB11B	100	73.394	Gallus_gallus
ENSSFOG00015006245	-	100	75.229	ENSGAFG00000007102	rab11bb	100	75.229	Gambusia_affinis
ENSSFOG00015006245	-	100	74.771	ENSGACG00000015479	rab11bb	100	74.771	Gasterosteus_aculeatus
ENSSFOG00015006245	-	100	70.721	ENSGACG00000013297	-	99	70.721	Gasterosteus_aculeatus
ENSSFOG00015006245	-	100	72.936	ENSGGOG00000014516	RAB11B	100	72.936	Gorilla_gorilla
ENSSFOG00015006245	-	100	73.853	ENSHBUG00000009947	-	100	73.853	Haplochromis_burtoni
ENSSFOG00015006245	-	100	75.229	ENSHBUG00000014777	rab11bb	100	75.229	Haplochromis_burtoni
ENSSFOG00015006245	-	100	71.560	ENSHCOG00000000954	-	100	71.560	Hippocampus_comes
ENSSFOG00015006245	-	100	69.725	ENSHCOG00000000985	-	100	69.725	Hippocampus_comes
ENSSFOG00015006245	-	100	74.771	ENSHCOG00000002423	rab11bb	100	74.771	Hippocampus_comes
ENSSFOG00015006245	-	100	73.394	ENSIPUG00000025100	rab11b	100	73.394	Ictalurus_punctatus
ENSSFOG00015006245	-	100	75.229	ENSIPUG00000019927	rab11bb	100	75.229	Ictalurus_punctatus
ENSSFOG00015006245	-	100	75.229	ENSKMAG00000009033	rab11bb	100	75.229	Kryptolebias_marmoratus
ENSSFOG00015006245	-	100	73.853	ENSKMAG00000006170	-	100	73.853	Kryptolebias_marmoratus
ENSSFOG00015006245	-	100	74.771	ENSLBEG00000015248	rab11bb	100	74.771	Labrus_bergylta
ENSSFOG00015006245	-	100	77.073	ENSLBEG00000005981	-	100	77.073	Labrus_bergylta
ENSSFOG00015006245	-	100	72.523	ENSLBEG00000004172	-	100	72.523	Labrus_bergylta
ENSSFOG00015006245	-	100	73.394	ENSLACG00000016857	-	100	73.394	Latimeria_chalumnae
ENSSFOG00015006245	-	100	72.936	ENSMFAG00000003654	RAB11B	100	72.936	Macaca_fascicularis
ENSSFOG00015006245	-	100	72.936	ENSMLEG00000030601	-	100	72.936	Mandrillus_leucophaeus
ENSSFOG00015006245	-	100	73.394	ENSMAMG00000018533	-	100	73.394	Mastacembelus_armatus
ENSSFOG00015006245	-	100	74.771	ENSMAMG00000006378	rab11bb	100	74.771	Mastacembelus_armatus
ENSSFOG00015006245	-	100	75.229	ENSMZEG00005003352	rab11bb	100	75.229	Maylandia_zebra
ENSSFOG00015006245	-	100	73.853	ENSMZEG00005010975	-	100	73.853	Maylandia_zebra
ENSSFOG00015006245	-	100	72.936	ENSMICG00000034065	-	100	72.936	Microcebus_murinus
ENSSFOG00015006245	-	100	73.853	ENSMMOG00000001250	-	100	73.853	Mola_mola
ENSSFOG00015006245	-	94	73.659	ENSMMOG00000007917	rab11bb	100	73.659	Mola_mola
ENSSFOG00015006245	-	99	71.889	ENSMMOG00000001238	-	99	71.889	Mola_mola
ENSSFOG00015006245	-	100	73.394	ENSMODG00000003841	-	100	73.394	Monodelphis_domestica
ENSSFOG00015006245	-	100	75.229	ENSMALG00000022187	rab11bb	100	75.229	Monopterus_albus
ENSSFOG00015006245	-	94	62.617	ENSMLUG00000006677	-	100	62.617	Myotis_lucifugus
ENSSFOG00015006245	-	100	75.229	ENSNBRG00000000372	rab11bb	100	75.229	Neolamprologus_brichardi
ENSSFOG00015006245	-	100	73.853	ENSNBRG00000023885	-	100	73.853	Neolamprologus_brichardi
ENSSFOG00015006245	-	100	73.394	ENSMEUG00000003686	-	100	73.394	Notamacropus_eugenii
ENSSFOG00015006245	-	100	73.853	ENSONIG00000002544	-	100	73.853	Oreochromis_niloticus
ENSSFOG00015006245	-	100	75.229	ENSONIG00000010435	rab11bb	100	75.229	Oreochromis_niloticus
ENSSFOG00015006245	-	99	69.737	ENSORLG00000015284	-	72	69.737	Oryzias_latipes
ENSSFOG00015006245	-	100	74.771	ENSORLG00000013938	rab11bb	100	74.771	Oryzias_latipes
ENSSFOG00015006245	-	100	74.771	ENSORLG00020019393	rab11bb	100	74.771	Oryzias_latipes_hni
ENSSFOG00015006245	-	99	72.685	ENSORLG00020020844	RAB11B	99	72.685	Oryzias_latipes_hni
ENSSFOG00015006245	-	100	74.771	ENSORLG00015020173	rab11bb	100	74.771	Oryzias_latipes_hsok
ENSSFOG00015006245	-	99	72.685	ENSORLG00015016999	RAB11B	99	72.685	Oryzias_latipes_hsok
ENSSFOG00015006245	-	100	75.229	ENSOMEG00000017806	-	100	75.229	Oryzias_melastigma
ENSSFOG00015006245	-	100	73.394	ENSOMEG00000002562	-	100	73.394	Oryzias_melastigma
ENSSFOG00015006245	-	100	72.936	ENSPPAG00000028589	-	100	72.936	Pan_paniscus
ENSSFOG00015006245	-	100	72.936	ENSPTRG00000010422	RAB11B	100	72.936	Pan_troglodytes
ENSSFOG00015006245	-	100	72.936	ENSPANG00000007765	-	100	72.936	Papio_anubis
ENSSFOG00015006245	-	100	74.771	ENSPKIG00000011703	-	100	74.771	Paramormyrops_kingsleyae
ENSSFOG00015006245	-	98	72.018	ENSPKIG00000001389	-	69	72.018	Paramormyrops_kingsleyae
ENSSFOG00015006245	-	100	75.229	ENSPKIG00000011640	rab11bb	100	75.229	Paramormyrops_kingsleyae
ENSSFOG00015006245	-	98	68.778	ENSPSIG00000010242	-	85	68.778	Pelodiscus_sinensis
ENSSFOG00015006245	-	100	73.394	ENSPMGG00000014333	-	100	73.394	Periophthalmus_magnuspinnatus
ENSSFOG00015006245	-	99	70.370	ENSPMGG00000014336	-	99	70.370	Periophthalmus_magnuspinnatus
ENSSFOG00015006245	-	100	75.229	ENSPMGG00000009435	rab11bb	100	75.229	Periophthalmus_magnuspinnatus
ENSSFOG00015006245	-	97	71.226	ENSPCIG00000020371	-	99	71.226	Phascolarctos_cinereus
ENSSFOG00015006245	-	100	75.229	ENSPFOG00000024114	-	100	75.229	Poecilia_formosa
ENSSFOG00015006245	-	100	73.853	ENSPFOG00000006224	-	100	73.853	Poecilia_formosa
ENSSFOG00015006245	-	100	75.229	ENSPLAG00000001598	rab11bb	100	75.229	Poecilia_latipinna
ENSSFOG00015006245	-	100	73.853	ENSPLAG00000014207	-	100	73.853	Poecilia_latipinna
ENSSFOG00015006245	-	100	73.853	ENSPMEG00000007842	-	100	73.853	Poecilia_mexicana
ENSSFOG00015006245	-	100	75.229	ENSPMEG00000012389	rab11bb	100	75.229	Poecilia_mexicana
ENSSFOG00015006245	-	100	73.394	ENSPREG00000006336	-	100	73.394	Poecilia_reticulata
ENSSFOG00015006245	-	100	75.229	ENSPREG00000014269	rab11bb	100	75.229	Poecilia_reticulata
ENSSFOG00015006245	-	100	75.229	ENSPNYG00000004098	rab11bb	100	75.229	Pundamilia_nyererei
ENSSFOG00015006245	-	100	73.853	ENSPNYG00000019611	-	100	73.853	Pundamilia_nyererei
ENSSFOG00015006245	-	100	72.936	ENSRROG00000037812	-	100	72.936	Rhinopithecus_roxellana
ENSSFOG00015006245	-	97	71.698	ENSSHAG00000006816	-	97	71.698	Sarcophilus_harrisii
ENSSFOG00015006245	-	100	74.771	ENSSMAG00000004922	rab11bb	100	74.771	Scophthalmus_maximus
ENSSFOG00015006245	-	100	71.560	ENSSMAG00000018613	-	100	71.560	Scophthalmus_maximus
ENSSFOG00015006245	-	100	73.853	ENSSDUG00000002934	-	100	73.853	Seriola_dumerili
ENSSFOG00015006245	-	100	75.229	ENSSDUG00000013558	rab11bb	100	75.229	Seriola_dumerili
ENSSFOG00015006245	-	100	73.853	ENSSLDG00000005275	-	100	73.853	Seriola_lalandi_dorsalis
ENSSFOG00015006245	-	100	75.229	ENSSLDG00000020676	rab11bb	100	75.229	Seriola_lalandi_dorsalis
ENSSFOG00015006245	-	100	72.936	ENSSPUG00000002243	-	100	72.936	Sphenodon_punctatus
ENSSFOG00015006245	-	100	73.853	ENSSPAG00000014559	-	100	73.853	Stegastes_partitus
ENSSFOG00015006245	-	100	75.229	ENSSPAG00000011419	rab11bb	100	75.229	Stegastes_partitus
ENSSFOG00015006245	-	100	73.394	ENSTGUG00000000084	-	100	73.394	Taeniopygia_guttata
ENSSFOG00015006245	-	100	75.229	ENSTRUG00000022029	rab11bb	100	75.229	Takifugu_rubripes
ENSSFOG00015006245	-	99	71.296	ENSTRUG00000021614	-	99	71.296	Takifugu_rubripes
ENSSFOG00015006245	-	99	74.537	ENSTRUG00000021619	-	100	74.537	Takifugu_rubripes
ENSSFOG00015006245	-	100	73.853	ENSTNIG00000011081	rab11bb	100	73.853	Tetraodon_nigroviridis
ENSSFOG00015006245	-	99	70.833	ENSTNIG00000013184	-	99	70.833	Tetraodon_nigroviridis
ENSSFOG00015006245	-	99	74.537	ENSTNIG00000013182	-	100	74.537	Tetraodon_nigroviridis
ENSSFOG00015006245	-	93	70.936	ENSTNIG00000002003	-	100	70.936	Tetraodon_nigroviridis
ENSSFOG00015006245	-	94	72.195	ENSUAMG00000006639	-	99	72.195	Ursus_americanus
ENSSFOG00015006245	-	100	73.516	ENSXETG00000025484	rab11b.1	99	73.516	Xenopus_tropicalis
ENSSFOG00015006245	-	100	73.853	ENSXCOG00000009190	-	100	73.853	Xiphophorus_couchianus
ENSSFOG00015006245	-	100	75.229	ENSXCOG00000008042	-	100	75.229	Xiphophorus_couchianus
ENSSFOG00015006245	-	100	73.853	ENSXMAG00000024840	-	100	73.853	Xiphophorus_maculatus
ENSSFOG00015006245	-	100	75.229	ENSXMAG00000011926	rab11bb	100	75.229	Xiphophorus_maculatus