EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015006296 (Gene tree)
Gene ID: 108918174
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 35041 bases
Position: chrKV411252.1:3043484-3078524
Accession: 108918174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009852	ResIII	PF04851.15	1.6e-08	1	1
ENSSFOP00015009805	ResIII	PF04851.15	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009940	-	7080	XM_018725235	ENSSFOP00015009805	2000 (aa)	XP_018580751	-
ENSSFOT00015009988	-	5490	-	ENSSFOP00015009852	1829 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015006296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015006296	chd5	87	77.432	ENSSFOG00015023123	chd3	97	66.286
ENSSFOG00015006296	chd5	91	75.510	ENSSFOG00015002908	chd4	95	71.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006296	chd5	92	87.352	ENSG00000116254	CHD5	97	78.053	Homo_sapiens
ENSSFOG00015006296	chd5	92	87.209	ENSAMEG00000009880	CHD5	92	83.274	Ailuropoda_melanoleuca
ENSSFOG00015006296	chd5	91	88.112	ENSACIG00000012582	chd5	99	85.722	Amphilophus_citrinellus
ENSSFOG00015006296	chd5	100	84.081	ENSAOCG00000020356	chd5	100	83.982	Amphiprion_ocellaris
ENSSFOG00015006296	chd5	87	92.991	ENSAPLG00000015475	CHD5	90	87.554	Anas_platyrhynchos
ENSSFOG00015006296	chd5	93	81.295	ENSACAG00000002441	CHD5	97	75.204	Anolis_carolinensis
ENSSFOG00015006296	chd5	81	94.872	ENSANAG00000001078	CHD5	84	87.978	Aotus_nancymaae
ENSSFOG00015006296	chd5	89	88.080	ENSACLG00000003012	chd5	96	88.786	Astatotilapia_calliptera
ENSSFOG00015006296	chd5	91	85.764	ENSAMXG00000008921	chd5	97	89.809	Astyanax_mexicanus
ENSSFOG00015006296	chd5	86	92.558	ENSBTAG00000040477	CHD5	91	88.841	Bos_taurus
ENSSFOG00015006296	chd5	92	87.352	ENSCJAG00000000101	CHD5	97	77.172	Callithrix_jacchus
ENSSFOG00015006296	chd5	90	83.214	ENSCAFG00000019545	CHD5	99	78.755	Canis_familiaris
ENSSFOG00015006296	chd5	93	83.274	ENSCAFG00020008689	CHD5	94	78.556	Canis_lupus_dingo
ENSSFOG00015006296	chd5	90	92.558	ENSCHIG00000015027	CHD5	88	88.841	Capra_hircus
ENSSFOG00015006296	chd5	92	86.381	ENSTSYG00000033991	CHD5	91	82.394	Carlito_syrichta
ENSSFOG00015006296	chd5	96	76.878	ENSCAPG00000009294	CHD5	98	78.347	Cavia_aperea
ENSSFOG00015006296	chd5	92	87.160	ENSCPOG00000025080	CHD5	98	78.347	Cavia_porcellus
ENSSFOG00015006296	chd5	92	87.352	ENSCCAG00000024756	CHD5	97	77.224	Cebus_capucinus
ENSSFOG00015006296	chd5	92	87.352	ENSCATG00000043011	CHD5	97	76.710	Cercocebus_atys
ENSSFOG00015006296	chd5	90	92.558	ENSCLAG00000010589	CHD5	88	88.841	Chinchilla_lanigera
ENSSFOG00015006296	chd5	92	87.352	ENSCSAG00000000733	CHD5	97	77.378	Chlorocebus_sabaeus
ENSSFOG00015006296	chd5	89	86.770	ENSCPBG00000019363	CHD5	100	77.289	Chrysemys_picta_bellii
ENSSFOG00015006296	chd5	92	87.352	ENSCANG00000032302	CHD5	97	77.481	Colobus_angolensis_palliatus
ENSSFOG00015006296	chd5	57	78.451	ENSCGRG00001011042	Chd5	99	82.547	Cricetulus_griseus_chok1gshd
ENSSFOG00015006296	chd5	90	92.093	ENSCGRG00000011341	Chd5	89	88.412	Cricetulus_griseus_crigri
ENSSFOG00015006296	chd5	90	82.488	ENSDARG00000025789	chd4b	88	82.488	Danio_rerio
ENSSFOG00015006296	chd5	99	84.010	ENSDARG00000105083	chd5	100	86.604	Danio_rerio
ENSSFOG00015006296	chd5	89	92.000	ENSDNOG00000046342	CHD5	86	92.000	Dasypus_novemcinctus
ENSSFOG00015006296	chd5	92	86.770	ENSDORG00000005923	Chd5	98	78.556	Dipodomys_ordii
ENSSFOG00015006296	chd5	92	87.059	ENSEASG00005021464	CHD5	93	90.338	Equus_asinus_asinus
ENSSFOG00015006296	chd5	92	87.059	ENSECAG00000025043	CHD5	97	88.841	Equus_caballus
ENSSFOG00015006296	chd5	72	85.714	ENSEEUG00000002772	CHD5	73	84.793	Erinaceus_europaeus
ENSSFOG00015006296	chd5	97	82.012	ENSELUG00000010742	chd5	96	88.446	Esox_lucius
ENSSFOG00015006296	chd5	92	86.770	ENSFCAG00000006319	CHD5	97	77.263	Felis_catus
ENSSFOG00015006296	chd5	89	86.770	ENSFALG00000009740	CHD5	99	76.150	Ficedula_albicollis
ENSSFOG00015006296	chd5	94	78.384	ENSFDAG00000012881	CHD5	95	77.790	Fukomys_damarensis
ENSSFOG00015006296	chd5	97	76.004	ENSGALG00000000747	CHD5	99	76.619	Gallus_gallus
ENSSFOG00015006296	chd5	59	83.715	ENSGACG00000004389	chd5	99	87.133	Gasterosteus_aculeatus
ENSSFOG00015006296	chd5	88	92.130	ENSGAGG00000001590	CHD5	96	92.000	Gopherus_agassizii
ENSSFOG00015006296	chd5	92	87.352	ENSGGOG00000000708	CHD5	98	77.212	Gorilla_gorilla
ENSSFOG00015006296	chd5	93	81.475	ENSHBUG00000013453	chd5	96	85.724	Haplochromis_burtoni
ENSSFOG00015006296	chd5	91	87.395	ENSHGLG00000018184	CHD5	99	77.181	Heterocephalus_glaber_female
ENSSFOG00015006296	chd5	91	87.395	ENSHGLG00100013261	CHD5	96	71.421	Heterocephalus_glaber_male
ENSSFOG00015006296	chd5	96	82.616	ENSIPUG00000005446	chd5	99	84.876	Ictalurus_punctatus
ENSSFOG00015006296	chd5	90	92.558	ENSSTOG00000002778	CHD5	90	86.667	Ictidomys_tridecemlineatus
ENSSFOG00015006296	chd5	92	86.275	ENSJJAG00000019072	Chd5	97	78.901	Jaculus_jaculus
ENSSFOG00015006296	chd5	100	85.265	ENSLOCG00000004944	chd5	100	86.314	Lepisosteus_oculatus
ENSSFOG00015006296	chd5	92	86.822	ENSLAFG00000006348	CHD5	100	77.676	Loxodonta_africana
ENSSFOG00015006296	chd5	92	87.251	ENSMFAG00000033993	CHD5	91	87.983	Macaca_fascicularis
ENSSFOG00015006296	chd5	90	92.417	ENSMMUG00000016838	CHD5	89	87.983	Macaca_mulatta
ENSSFOG00015006296	chd5	92	87.352	ENSMNEG00000040044	CHD5	97	77.429	Macaca_nemestrina
ENSSFOG00015006296	chd5	88	82.740	ENSMLEG00000039166	CHD5	98	74.683	Mandrillus_leucophaeus
ENSSFOG00015006296	chd5	88	87.024	ENSMZEG00005000841	chd5	92	87.684	Maylandia_zebra
ENSSFOG00015006296	chd5	90	82.918	ENSMGAG00000001055	CHD5	98	76.289	Meleagris_gallopavo
ENSSFOG00015006296	chd5	93	79.094	ENSMICG00000017862	CHD5	97	81.951	Microcebus_murinus
ENSSFOG00015006296	chd5	90	92.093	ENSMOCG00000011049	Chd5	89	88.412	Microtus_ochrogaster
ENSSFOG00015006296	chd5	78	87.549	ENSMODG00000006294	CHD5	77	82.679	Monodelphis_domestica
ENSSFOG00015006296	chd5	93	87.105	ENSMALG00000002831	chd5	99	85.751	Monopterus_albus
ENSSFOG00015006296	chd5	90	92.093	MGP_CAROLIEiJ_G0026857	Chd5	97	77.401	Mus_caroli
ENSSFOG00015006296	chd5	90	92.093	ENSMUSG00000005045	Chd5	97	78.352	Mus_musculus
ENSSFOG00015006296	chd5	90	92.093	MGP_PahariEiJ_G0029205	Chd5	88	88.412	Mus_pahari
ENSSFOG00015006296	chd5	90	92.093	MGP_SPRETEiJ_G0027850	Chd5	97	78.695	Mus_spretus
ENSSFOG00015006296	chd5	94	82.857	ENSMPUG00000007122	CHD5	98	76.635	Mustela_putorius_furo
ENSSFOG00015006296	chd5	92	85.441	ENSNGAG00000019812	Chd5	94	77.378	Nannospalax_galili
ENSSFOG00015006296	chd5	92	79.601	ENSNLEG00000010320	CHD5	98	75.476	Nomascus_leucogenys
ENSSFOG00015006296	chd5	83	73.706	ENSOPRG00000004304	CHD5	84	73.569	Ochotona_princeps
ENSSFOG00015006296	chd5	91	88.235	ENSODEG00000010262	CHD5	89	88.841	Octodon_degus
ENSSFOG00015006296	chd5	91	89.680	ENSONIG00000000619	chd5	99	82.812	Oreochromis_niloticus
ENSSFOG00015006296	chd5	89	87.405	ENSOANG00000001819	CHD5	88	83.746	Ornithorhynchus_anatinus
ENSSFOG00015006296	chd5	91	83.630	ENSOGAG00000005703	CHD5	93	78.347	Otolemur_garnettii
ENSSFOG00015006296	chd5	90	92.558	ENSOARG00000013425	CHD5	89	88.841	Ovis_aries
ENSSFOG00015006296	chd5	92	87.352	ENSPPAG00000034048	CHD5	98	77.224	Pan_paniscus
ENSSFOG00015006296	chd5	92	86.770	ENSPPRG00000009453	CHD5	97	77.336	Panthera_pardus
ENSSFOG00015006296	chd5	92	74.585	ENSPTIG00000013926	CHD5	98	71.791	Panthera_tigris_altaica
ENSSFOG00015006296	chd5	92	87.352	ENSPTRG00000000075	CHD5	97	77.224	Pan_troglodytes
ENSSFOG00015006296	chd5	92	87.352	ENSPANG00000006765	CHD5	97	77.429	Papio_anubis
ENSSFOG00015006296	chd5	94	85.954	ENSPKIG00000004282	chd5	94	90.693	Paramormyrops_kingsleyae
ENSSFOG00015006296	chd5	89	78.478	ENSPSIG00000006414	CHD5	99	72.156	Pelodiscus_sinensis
ENSSFOG00015006296	chd5	68	79.968	ENSPEMG00000014799	Chd5	97	82.769	Peromyscus_maniculatus_bairdii
ENSSFOG00015006296	chd5	97	78.176	ENSPCIG00000028310	CHD5	96	78.181	Phascolarctos_cinereus
ENSSFOG00015006296	chd5	93	89.007	ENSPLAG00000005343	chd5	96	83.569	Poecilia_latipinna
ENSSFOG00015006296	chd5	88	87.352	ENSPPYG00000001952	CHD5	98	79.469	Pongo_abelii
ENSSFOG00015006296	chd5	90	83.571	ENSPCOG00000022930	CHD5	97	76.994	Propithecus_coquereli
ENSSFOG00015006296	chd5	91	87.413	ENSPNYG00000003183	chd5	99	84.035	Pundamilia_nyererei
ENSSFOG00015006296	chd5	92	86.381	ENSRNOG00000011268	Chd5	98	77.303	Rattus_norvegicus
ENSSFOG00015006296	chd5	91	87.352	ENSRBIG00000032140	CHD5	99	76.687	Rhinopithecus_bieti
ENSSFOG00015006296	chd5	94	87.352	ENSRROG00000041146	CHD5	97	77.275	Rhinopithecus_roxellana
ENSSFOG00015006296	chd5	88	87.352	ENSSBOG00000001955	CHD5	99	78.999	Saimiri_boliviensis_boliviensis
ENSSFOG00015006296	chd5	94	72.093	ENSSHAG00000018641	CHD5	99	71.835	Sarcophilus_harrisii
ENSSFOG00015006296	chd5	91	84.939	ENSSDUG00000017526	chd5	94	88.664	Seriola_dumerili
ENSSFOG00015006296	chd5	93	87.549	ENSSPUG00000010622	CHD5	92	83.274	Sphenodon_punctatus
ENSSFOG00015006296	chd5	90	88.261	ENSSSCG00000003366	CHD5	99	78.625	Sus_scrofa
ENSSFOG00015006296	chd5	88	86.695	ENSTGUG00000002634	-	93	86.695	Taeniopygia_guttata
ENSSFOG00015006296	chd5	51	87.771	ENSTNIG00000004346	chd5	99	87.747	Tetraodon_nigroviridis
ENSSFOG00015006296	chd5	93	83.214	ENSTTRG00000010468	CHD5	97	77.673	Tursiops_truncatus
ENSSFOG00015006296	chd5	90	93.023	ENSUAMG00000024509	CHD5	95	90.291	Ursus_americanus
ENSSFOG00015006296	chd5	89	95.312	ENSUMAG00000024173	CHD5	90	90.233	Ursus_maritimus
ENSSFOG00015006296	chd5	96	82.746	ENSVVUG00000026480	CHD5	93	91.133	Vulpes_vulpes
ENSSFOG00015006296	chd5	96	74.416	ENSXETG00000002904	chd5	99	73.819	Xenopus_tropicalis
ENSSFOG00015006296	chd5	62	85.714	ENSXCOG00000014202	chd5	99	85.714	Xiphophorus_couchianus