EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015006338 (Gene tree)
Gene ID: 108936262
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 12923 bases
Position: chrKV411115.1:1307817-1320739
Accession: 108936262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009731	RRM_1	PF00076.22	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009866	-	4315	XM_018755546	ENSSFOP00015009731	955 (aa)	XP_018611062	-

Gene Model

Click here to download ENSSFOG00015006338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006338	scaf4a	54	58.226	ENSG00000156304	SCAF4	89	47.267	Homo_sapiens
ENSSFOG00015006338	scaf4a	59	46.292	ENSAPOG00000019615	scaf4b	61	42.921	Acanthochromis_polyacanthus
ENSSFOG00015006338	scaf4a	83	54.897	ENSAPOG00000002946	scaf4a	88	46.673	Acanthochromis_polyacanthus
ENSSFOG00015006338	scaf4a	83	54.106	ENSAOCG00000000615	scaf4a	58	51.573	Amphiprion_ocellaris
ENSSFOG00015006338	scaf4a	80	45.775	ENSAOCG00000010433	scaf4b	62	44.318	Amphiprion_ocellaris
ENSSFOG00015006338	scaf4a	80	45.775	ENSAPEG00000010913	scaf4b	62	44.318	Amphiprion_percula
ENSSFOG00015006338	scaf4a	83	53.865	ENSAPEG00000021229	scaf4a	58	51.300	Amphiprion_percula
ENSSFOG00015006338	scaf4a	98	51.055	ENSAPLG00000002509	SCAF4	87	50.402	Anas_platyrhynchos
ENSSFOG00015006338	scaf4a	92	49.687	ENSACAG00000002569	SCAF4	75	48.960	Anolis_carolinensis
ENSSFOG00015006338	scaf4a	54	58.041	ENSANAG00000037494	SCAF4	89	47.697	Aotus_nancymaae
ENSSFOG00015006338	scaf4a	61	40.652	ENSACLG00000024833	scaf4b	63	41.432	Astatotilapia_calliptera
ENSSFOG00015006338	scaf4a	98	55.304	ENSAMXG00000008585	scaf4a	87	56.174	Astyanax_mexicanus
ENSSFOG00015006338	scaf4a	54	57.404	ENSBTAG00000018855	SCAF4	88	47.172	Bos_taurus
ENSSFOG00015006338	scaf4a	54	57.749	ENSCJAG00000008993	SCAF4	89	47.132	Callithrix_jacchus
ENSSFOG00015006338	scaf4a	54	58.442	ENSCAFG00000008863	SCAF4	88	47.947	Canis_familiaris
ENSSFOG00015006338	scaf4a	54	58.442	ENSCAFG00020026019	SCAF4	99	47.947	Canis_lupus_dingo
ENSSFOG00015006338	scaf4a	54	57.692	ENSCHIG00000008385	SCAF4	87	48.528	Capra_hircus
ENSSFOG00015006338	scaf4a	54	56.498	ENSCPOG00000012443	SCAF4	87	46.699	Cavia_porcellus
ENSSFOG00015006338	scaf4a	54	57.963	ENSCCAG00000033727	SCAF4	67	53.359	Cebus_capucinus
ENSSFOG00015006338	scaf4a	54	59.847	ENSCATG00000030379	SCAF4	88	47.328	Cercocebus_atys
ENSSFOG00015006338	scaf4a	54	55.635	ENSCLAG00000006298	SCAF4	67	52.179	Chinchilla_lanigera
ENSSFOG00015006338	scaf4a	54	57.934	ENSCSAG00000009438	SCAF4	66	53.350	Chlorocebus_sabaeus
ENSSFOG00015006338	scaf4a	54	58.041	ENSCANG00000029847	SCAF4	89	47.092	Colobus_angolensis_palliatus
ENSSFOG00015006338	scaf4a	95	46.595	ENSCSEG00000019549	scaf4a	56	46.979	Cynoglossus_semilaevis
ENSSFOG00015006338	scaf4a	85	57.927	ENSDARG00000077093	scaf4a	60	59.199	Danio_rerio
ENSSFOG00015006338	scaf4a	54	57.301	ENSDNOG00000019014	SCAF4	83	47.338	Dasypus_novemcinctus
ENSSFOG00015006338	scaf4a	66	79.724	ENSETEG00000000583	SCAF4	55	52.455	Echinops_telfairi
ENSSFOG00015006338	scaf4a	54	57.248	ENSEASG00005007756	SCAF4	66	52.978	Equus_asinus_asinus
ENSSFOG00015006338	scaf4a	54	57.248	ENSECAG00000014248	SCAF4	87	46.558	Equus_caballus
ENSSFOG00015006338	scaf4a	54	57.404	ENSFCAG00000002228	SCAF4	88	47.628	Felis_catus
ENSSFOG00015006338	scaf4a	54	53.345	ENSFDAG00000017780	SCAF4	67	50.918	Fukomys_damarensis
ENSSFOG00015006338	scaf4a	93	50.651	ENSFHEG00000017866	scaf4a	77	48.271	Fundulus_heteroclitus
ENSSFOG00015006338	scaf4a	98	51.008	ENSGALG00000033965	SCAF4	86	50.653	Gallus_gallus
ENSSFOG00015006338	scaf4a	70	54.352	ENSGACG00000020580	scaf4a	72	55.158	Gasterosteus_aculeatus
ENSSFOG00015006338	scaf4a	91	54.516	ENSGGOG00000015557	SCAF4	63	53.947	Gorilla_gorilla
ENSSFOG00015006338	scaf4a	83	52.996	ENSHBUG00000007920	scaf4a	92	45.078	Haplochromis_burtoni
ENSSFOG00015006338	scaf4a	96	54.118	ENSIPUG00000011285	scaf4	91	55.719	Ictalurus_punctatus
ENSSFOG00015006338	scaf4a	53	57.786	ENSSTOG00000004450	SCAF4	92	45.962	Ictidomys_tridecemlineatus
ENSSFOG00015006338	scaf4a	54	59.259	ENSJJAG00000019447	Scaf4	83	48.621	Jaculus_jaculus
ENSSFOG00015006338	scaf4a	79	40.000	ENSKMAG00000005742	scaf4b	52	47.309	Kryptolebias_marmoratus
ENSSFOG00015006338	scaf4a	79	54.071	ENSLBEG00000014675	scaf4a	91	44.824	Labrus_bergylta
ENSSFOG00015006338	scaf4a	53	55.229	ENSLACG00000013913	SCAF4	88	48.649	Latimeria_chalumnae
ENSSFOG00015006338	scaf4a	100	66.223	ENSLOCG00000009162	scaf4a	88	66.905	Lepisosteus_oculatus
ENSSFOG00015006338	scaf4a	54	58.692	ENSLAFG00000010710	SCAF4	87	48.524	Loxodonta_africana
ENSSFOG00015006338	scaf4a	54	59.847	ENSMFAG00000037668	SCAF4	65	54.534	Macaca_fascicularis
ENSSFOG00015006338	scaf4a	54	57.856	ENSMMUG00000001712	SCAF4	66	53.291	Macaca_mulatta
ENSSFOG00015006338	scaf4a	54	59.847	ENSMNEG00000032966	SCAF4	88	47.941	Macaca_nemestrina
ENSSFOG00015006338	scaf4a	54	57.856	ENSMLEG00000039674	SCAF4	89	46.286	Mandrillus_leucophaeus
ENSSFOG00015006338	scaf4a	81	47.973	ENSMAMG00000013223	scaf4a	81	50.141	Mastacembelus_armatus
ENSSFOG00015006338	scaf4a	99	48.068	ENSMZEG00005024349	scaf4a	88	45.779	Maylandia_zebra
ENSSFOG00015006338	scaf4a	98	51.109	ENSMGAG00000014515	SCAF4	87	50.854	Meleagris_gallopavo
ENSSFOG00015006338	scaf4a	54	57.741	ENSMAUG00000013307	Scaf4	84	48.036	Mesocricetus_auratus
ENSSFOG00015006338	scaf4a	54	60.374	ENSMICG00000005256	SCAF4	88	46.958	Microcebus_murinus
ENSSFOG00015006338	scaf4a	54	60.152	ENSMODG00000021040	SCAF4	86	49.704	Monodelphis_domestica
ENSSFOG00015006338	scaf4a	54	58.256	ENSMPUG00000001078	SCAF4	66	53.553	Mustela_putorius_furo
ENSSFOG00015006338	scaf4a	54	58.577	ENSNGAG00000005214	Scaf4	66	53.701	Nannospalax_galili
ENSSFOG00015006338	scaf4a	54	58.226	ENSNLEG00000003569	SCAF4	89	47.025	Nomascus_leucogenys
ENSSFOG00015006338	scaf4a	54	54.965	ENSODEG00000002718	SCAF4	66	50.927	Octodon_degus
ENSSFOG00015006338	scaf4a	83	52.336	ENSONIG00000004687	scaf4a	87	47.265	Oreochromis_niloticus
ENSSFOG00015006338	scaf4a	54	56.909	ENSOCUG00000008336	SCAF4	65	52.799	Oryctolagus_cuniculus
ENSSFOG00015006338	scaf4a	67	53.182	ENSORLG00000004384	scaf4a	87	44.968	Oryzias_latipes
ENSSFOG00015006338	scaf4a	94	44.828	ENSORLG00020011857	scaf4a	87	45.009	Oryzias_latipes_hni
ENSSFOG00015006338	scaf4a	67	53.111	ENSOMEG00000014482	scaf4a	87	45.096	Oryzias_melastigma
ENSSFOG00015006338	scaf4a	54	57.091	ENSOARG00000013894	SCAF4	87	48.250	Ovis_aries
ENSSFOG00015006338	scaf4a	54	59.847	ENSPPAG00000028535	SCAF4	89	47.707	Pan_paniscus
ENSSFOG00015006338	scaf4a	54	57.982	ENSPPRG00000000635	SCAF4	89	47.909	Panthera_pardus
ENSSFOG00015006338	scaf4a	54	58.647	ENSPTIG00000021578	SCAF4	68	52.073	Panthera_tigris_altaica
ENSSFOG00015006338	scaf4a	54	59.847	ENSPTRG00000013848	SCAF4	89	47.707	Pan_troglodytes
ENSSFOG00015006338	scaf4a	54	57.856	ENSPANG00000017332	SCAF4	67	53.291	Papio_anubis
ENSSFOG00015006338	scaf4a	60	78.547	ENSPKIG00000022408	scaf4a	83	78.401	Paramormyrops_kingsleyae
ENSSFOG00015006338	scaf4a	98	49.950	ENSPSIG00000014242	SCAF4	84	48.695	Pelodiscus_sinensis
ENSSFOG00015006338	scaf4a	54	59.583	ENSPCIG00000028183	SCAF4	80	48.614	Phascolarctos_cinereus
ENSSFOG00015006338	scaf4a	90	48.552	ENSPFOG00000017156	scaf4a	52	48.263	Poecilia_formosa
ENSSFOG00015006338	scaf4a	54	58.226	ENSPPYG00000011355	SCAF4	88	47.363	Pongo_abelii
ENSSFOG00015006338	scaf4a	61	75.610	ENSPCAG00000009998	SCAF4	75	52.256	Procavia_capensis
ENSSFOG00015006338	scaf4a	99	46.763	ENSPCOG00000018710	SCAF4	87	47.619	Propithecus_coquereli
ENSSFOG00015006338	scaf4a	54	59.150	ENSPVAG00000005220	SCAF4	87	48.760	Pteropus_vampyrus
ENSSFOG00015006338	scaf4a	61	40.652	ENSPNYG00000010526	scaf4b	63	41.432	Pundamilia_nyererei
ENSSFOG00015006338	scaf4a	87	61.340	ENSPNAG00000016892	scaf4a	56	59.425	Pygocentrus_nattereri
ENSSFOG00015006338	scaf4a	54	58.365	ENSRBIG00000040007	SCAF4	60	45.345	Rhinopithecus_bieti
ENSSFOG00015006338	scaf4a	54	57.856	ENSRROG00000029488	SCAF4	91	46.800	Rhinopithecus_roxellana
ENSSFOG00015006338	scaf4a	54	59.287	ENSSHAG00000001581	SCAF4	87	50.204	Sarcophilus_harrisii
ENSSFOG00015006338	scaf4a	80	42.506	ENSSMAG00000003738	scaf4b	74	43.274	Scophthalmus_maximus
ENSSFOG00015006338	scaf4a	95	45.480	ENSSMAG00000017901	scaf4a	78	48.418	Scophthalmus_maximus
ENSSFOG00015006338	scaf4a	79	52.785	ENSSDUG00000012918	scaf4a	88	46.834	Seriola_dumerili
ENSSFOG00015006338	scaf4a	79	53.083	ENSSLDG00000021671	scaf4a	88	46.753	Seriola_lalandi_dorsalis
ENSSFOG00015006338	scaf4a	54	58.303	ENSSARG00000009994	SCAF4	65	54.268	Sorex_araneus
ENSSFOG00015006338	scaf4a	54	56.937	ENSSSCG00000021023	SCAF4	83	48.238	Sus_scrofa
ENSSFOG00015006338	scaf4a	72	57.670	ENSTGUG00000013464	SCAF4	85	52.000	Taeniopygia_guttata
ENSSFOG00015006338	scaf4a	54	57.353	ENSTTRG00000010963	SCAF4	67	52.685	Tursiops_truncatus
ENSSFOG00015006338	scaf4a	54	58.333	ENSUAMG00000008860	SCAF4	87	48.077	Ursus_americanus
ENSSFOG00015006338	scaf4a	54	59.770	ENSUMAG00000016962	SCAF4	88	49.655	Ursus_maritimus
ENSSFOG00015006338	scaf4a	54	58.442	ENSVVUG00000002953	SCAF4	88	47.947	Vulpes_vulpes
ENSSFOG00015006338	scaf4a	56	51.133	ENSXETG00000007351	scaf4	86	43.435	Xenopus_tropicalis