EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015006344 (Gene tree)
Gene ID: 108930936
Gene Symbol: acin1b
Alias: acinus|acinusb|fi14c05|wu:fe06a10|wu:fi14c05
Full Name: apoptotic chromatin condensation inducer in the nucleus-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 28288 bases
Position: chrKV410941.1:49901-78188
Accession: 108930936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015009806	SAP	PF02037.27	4.3e-10	1	1
ENSSFOP00015009769	SAP	PF02037.27	5.8e-10	1	1
ENSSFOP00015009753	SAP	PF02037.27	6.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015009904	-	4874	-	ENSSFOP00015009769	1506 (aa)	-	-
ENSSFOT00015009872	-	5899	-	ENSSFOP00015009737	1521 (aa)	-	-
ENSSFOT00015009974	-	1949	-	ENSSFOP00015009838	578 (aa)	-	-
ENSSFOT00015009888	-	6317	XM_018746431	ENSSFOP00015009753	1562 (aa)	XP_018601947	-
ENSSFOT00015009961	-	6337	-	ENSSFOP00015009826	1514 (aa)	-	-
ENSSFOT00015009941	-	3355	-	ENSSFOP00015009806	1019 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015006344's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG
sfm03015	mRNA surveillance pathway	KEGG
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006344	acin1b	68	56.109	ENSAOCG00000018649	acin1b	74	57.258	Amphiprion_ocellaris
ENSSFOG00015006344	acin1b	66	59.683	ENSATEG00000001677	acin1b	82	55.031	Anabas_testudineus
ENSSFOG00015006344	acin1b	61	58.932	ENSACLG00000011103	acin1b	55	63.636	Astatotilapia_calliptera
ENSSFOG00015006344	acin1b	68	53.765	ENSCSEG00000004364	acin1b	83	53.945	Cynoglossus_semilaevis
ENSSFOG00015006344	acin1b	66	56.842	ENSDARG00000026842	acin1b	53	82.787	Danio_rerio
ENSSFOG00015006344	acin1b	54	88.043	ENSELUG00000003511	acin1b	72	88.043	Esox_lucius
ENSSFOG00015006344	acin1b	69	54.460	ENSGAFG00000003479	acin1b	82	55.788	Gambusia_affinis
ENSSFOG00015006344	acin1b	59	64.206	ENSHBUG00000020274	acin1b	81	59.844	Haplochromis_burtoni
ENSSFOG00015006344	acin1b	67	56.446	ENSHCOG00000000814	acin1b	88	79.245	Hippocampus_comes
ENSSFOG00015006344	acin1b	60	64.978	ENSIPUG00000006269	acin1b	70	92.661	Ictalurus_punctatus
ENSSFOG00015006344	acin1b	67	59.585	ENSMAMG00000015673	acin1b	83	55.156	Mastacembelus_armatus
ENSSFOG00015006344	acin1b	65	62.111	ENSORLG00000007365	acin1b	82	60.105	Oryzias_latipes
ENSSFOG00015006344	acin1b	65	61.235	ENSORLG00020007510	acin1b	82	59.331	Oryzias_latipes_hni
ENSSFOG00015006344	acin1b	67	61.959	ENSOMEG00000015053	acin1b	83	60.000	Oryzias_melastigma
ENSSFOG00015006344	acin1b	64	68.868	ENSPKIG00000009246	-	54	65.225	Paramormyrops_kingsleyae
ENSSFOG00015006344	acin1b	98	59.812	ENSPKIG00000006917	-	96	60.381	Paramormyrops_kingsleyae
ENSSFOG00015006344	acin1b	54	59.840	ENSPFOG00000009202	acin1b	81	56.271	Poecilia_formosa
ENSSFOG00015006344	acin1b	54	59.840	ENSPLAG00000021380	acin1b	81	56.178	Poecilia_latipinna
ENSSFOG00015006344	acin1b	54	60.106	ENSPMEG00000000313	acin1b	81	56.623	Poecilia_mexicana
ENSSFOG00015006344	acin1b	56	60.302	ENSPREG00000004790	acin1b	82	57.074	Poecilia_reticulata
ENSSFOG00015006344	acin1b	59	64.206	ENSPNYG00000005309	acin1b	80	59.064	Pundamilia_nyererei
ENSSFOG00015006344	acin1b	62	58.517	ENSPNAG00000022123	acin1b	59	58.118	Pygocentrus_nattereri
ENSSFOG00015006344	acin1b	65	61.221	ENSSMAG00000005897	acin1b	81	58.444	Scophthalmus_maximus
ENSSFOG00015006344	acin1b	58	59.414	ENSSDUG00000006437	acin1b	83	56.299	Seriola_dumerili
ENSSFOG00015006344	acin1b	54	66.316	ENSTRUG00000008622	acin1b	83	60.596	Takifugu_rubripes
ENSSFOG00015006344	acin1b	50	61.538	ENSXCOG00000000454	acin1b	79	57.328	Xiphophorus_couchianus
ENSSFOG00015006344	acin1b	56	57.816	ENSXMAG00000001598	acin1b	81	55.397	Xiphophorus_maculatus