EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015006414 (Gene tree)
Gene ID: 108941688
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5607 bases
Position: chrKV411220.1:4545095-4550701
Accession: 108941688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010144	MMR_HSR1	PF01926.23	4.3e-07	1	1
ENSSFOP00015010175	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015010315	-	597	-	ENSSFOP00015010175	198 (aa)	-	-
ENSSFOT00015010283	-	630	XM_018764473	ENSSFOP00015010144	209 (aa)	XP_018619989	-

Gene Model

Click here to download ENSSFOG00015006414's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006414's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015006414	-	78	35.542	ENSSFOG00015011157	-	87	35.542
ENSSFOG00015006414	-	80	36.047	ENSSFOG00015023903	KRAS	95	34.066
ENSSFOG00015006414	-	79	63.694	ENSSFOG00015005464	zgc:171927	77	62.577
ENSSFOG00015006414	-	58	30.172	ENSSFOG00015002122	arl5b	62	30.172
ENSSFOG00015006414	-	80	35.838	ENSSFOG00015011771	-	84	35.838
ENSSFOG00015006414	-	91	36.318	ENSSFOG00015005188	rab34	78	36.318
ENSSFOG00015006414	-	93	38.191	ENSSFOG00015012088	rab42	88	38.191
ENSSFOG00015006414	-	77	39.216	ENSSFOG00015012085	rab22a	83	37.267
ENSSFOG00015006414	-	93	33.333	ENSSFOG00015021180	RAB7A	93	33.333
ENSSFOG00015006414	-	83	47.701	ENSSFOG00015017296	rab15	82	47.701
ENSSFOG00015006414	-	78	32.143	ENSSFOG00015014992	rhebl1	88	32.143
ENSSFOG00015006414	-	82	37.079	ENSSFOG00015000053	rab9a	81	37.079
ENSSFOG00015006414	-	79	44.970	ENSSFOG00015015336	rab4a	78	44.970
ENSSFOG00015006414	-	93	40.933	ENSSFOG00015000865	-	99	40.933
ENSSFOG00015006414	-	77	35.185	ENSSFOG00015006846	-	94	34.078
ENSSFOG00015006414	-	95	40.704	ENSSFOG00015014517	rab5a	89	40.704
ENSSFOG00015006414	-	89	42.857	ENSSFOG00015020112	rab33b	87	42.857
ENSSFOG00015006414	-	85	46.196	ENSSFOG00015004253	rab33a	82	46.196
ENSSFOG00015006414	-	83	44.828	ENSSFOG00015008618	rab11al	81	44.828
ENSSFOG00015006414	-	82	48.521	ENSSFOG00015017444	rab18a	69	48.521
ENSSFOG00015006414	-	80	47.826	ENSSFOG00015018421	rab39b	81	45.930
ENSSFOG00015006414	-	95	35.176	ENSSFOG00015002077	rab6a	93	35.176
ENSSFOG00015006414	-	81	43.478	ENSSFOG00015012785	rab14	80	42.105
ENSSFOG00015006414	-	82	35.028	ENSSFOG00015020012	rab7a	85	35.028
ENSSFOG00015006414	-	86	45.078	ENSSFOG00015006175	zgc:101559	83	45.078
ENSSFOG00015006414	-	89	34.359	ENSSFOG00015005076	zgc:100918	95	34.359
ENSSFOG00015006414	-	76	32.484	ENSSFOG00015017512	dnajc27	58	33.544
ENSSFOG00015006414	-	94	41.463	ENSSFOG00015003628	-	96	41.463
ENSSFOG00015006414	-	82	35.429	ENSSFOG00015016156	rab36	69	35.429
ENSSFOG00015006414	-	90	37.895	ENSSFOG00015024034	rab33ba	94	37.895
ENSSFOG00015006414	-	97	53.922	ENSSFOG00015001293	rab1ab	99	53.922
ENSSFOG00015006414	-	97	53.922	ENSSFOG00015011140	-	97	53.922
ENSSFOG00015006414	-	80	31.250	ENSSFOG00015020074	DNAJC27	64	31.250
ENSSFOG00015006414	-	84	33.714	ENSSFOG00015012604	rab23	80	33.673
ENSSFOG00015006414	-	78	34.524	ENSSFOG00015023790	rheb	88	34.524
ENSSFOG00015006414	-	89	45.213	ENSSFOG00015024042	rab11a	87	45.213
ENSSFOG00015006414	-	95	35.678	ENSSFOG00015004941	rab41	90	35.678
ENSSFOG00015006414	-	78	41.071	ENSSFOG00015016000	-	78	41.071
ENSSFOG00015006414	-	93	31.443	ENSSFOG00015020738	rabl2	81	31.443
ENSSFOG00015006414	-	81	44.186	ENSSFOG00015020732	rab42a	81	44.186
ENSSFOG00015006414	-	81	40.491	ENSSFOG00015019202	RAB6B	83	38.728
ENSSFOG00015006414	-	76	30.519	ENSSFOG00015004613	rasd4	74	30.519
ENSSFOG00015006414	-	85	45.556	ENSSFOG00015009042	rab11bb	83	45.556
ENSSFOG00015006414	-	84	33.149	ENSSFOG00015003259	rab9a	85	33.149
ENSSFOG00015006414	-	76	32.919	ENSSFOG00015014423	rras2	90	32.919
ENSSFOG00015006414	-	80	42.262	ENSSFOG00015021115	-	78	42.262
ENSSFOG00015006414	-	82	37.569	ENSSFOG00015004325	rab34a	70	37.569
ENSSFOG00015006414	-	82	43.931	ENSSFOG00015009988	-	78	43.931
ENSSFOG00015006414	-	83	51.136	ENSSFOG00015021754	rab13	88	51.136
ENSSFOG00015006414	-	81	39.412	ENSSFOG00015009244	rab39bb	76	39.412
ENSSFOG00015006414	-	95	33.005	ENSSFOG00015009566	si:dkey-13a21.4	96	33.005
ENSSFOG00015006414	-	78	35.542	ENSSFOG00015003051	hrasb	87	35.542
ENSSFOG00015006414	-	81	43.275	ENSSFOG00015015034	rab2a	81	43.023
ENSSFOG00015006414	-	84	38.122	ENSSFOG00015010492	rab9b	88	38.122
ENSSFOG00015006414	-	97	52.941	ENSSFOG00015020836	rab1ba	99	52.941
ENSSFOG00015006414	-	78	44.516	ENSSFOG00015008657	rab25a	75	44.304
ENSSFOG00015006414	-	99	78.846	ENSSFOG00015021448	-	99	78.846
ENSSFOG00015006414	-	77	35.583	ENSSFOG00015020319	mras	84	35.583
ENSSFOG00015006414	-	81	43.478	ENSSFOG00015011318	-	80	42.105
ENSSFOG00015006414	-	89	38.542	ENSSFOG00015011268	RAB41	91	38.542
ENSSFOG00015006414	-	83	78.035	ENSSFOG00015006076	rab35	99	69.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006414	-	85	83.051	ENSAPOG00000008263	si:dkey-16l2.16	99	79.808	Acanthochromis_polyacanthus
ENSSFOG00015006414	-	93	77.041	ENSAOCG00000016825	si:dkey-16l2.16	99	80.288	Amphiprion_ocellaris
ENSSFOG00015006414	-	93	77.041	ENSAPEG00000006500	si:dkey-16l2.16	99	80.288	Amphiprion_percula
ENSSFOG00015006414	-	99	80.288	ENSATEG00000019238	si:dkey-16l2.16	99	80.769	Anabas_testudineus
ENSSFOG00015006414	-	85	84.746	ENSACLG00000018721	si:dkey-16l2.16	99	81.731	Astatotilapia_calliptera
ENSSFOG00015006414	-	93	81.122	ENSAMXG00000038243	si:dkey-16l2.16	94	88.983	Astyanax_mexicanus
ENSSFOG00015006414	-	60	89.831	ENSCSEG00000009988	si:dkey-16l2.16	90	89.831	Cynoglossus_semilaevis
ENSSFOG00015006414	-	93	78.571	ENSCVAG00000003537	si:dkey-16l2.16	99	81.250	Cyprinodon_variegatus
ENSSFOG00015006414	-	99	80.288	ENSDARG00000037967	si:dkey-16l2.16	99	89.831	Danio_rerio
ENSSFOG00015006414	-	99	75.728	ENSELUG00000023247	si:dkey-16l2.16	98	75.728	Esox_lucius
ENSSFOG00015006414	-	60	86.441	ENSFHEG00000000767	si:dkey-16l2.16	78	85.124	Fundulus_heteroclitus
ENSSFOG00015006414	-	81	75.776	ENSGMOG00000015174	si:dkey-16l2.16	99	75.460	Gadus_morhua
ENSSFOG00015006414	-	99	76.923	ENSGAFG00000005388	si:dkey-16l2.16	99	76.923	Gambusia_affinis
ENSSFOG00015006414	-	85	83.051	ENSGACG00000014915	si:dkey-16l2.16	97	78.846	Gasterosteus_aculeatus
ENSSFOG00015006414	-	85	85.311	ENSHBUG00000019261	si:dkey-16l2.16	99	82.212	Haplochromis_burtoni
ENSSFOG00015006414	-	99	75.962	ENSHCOG00000006538	si:dkey-16l2.16	99	78.365	Hippocampus_comes
ENSSFOG00015006414	-	85	80.226	ENSKMAG00000003494	si:dkey-16l2.16	99	77.404	Kryptolebias_marmoratus
ENSSFOG00015006414	-	85	82.486	ENSLBEG00000007681	si:dkey-16l2.16	99	78.846	Labrus_bergylta
ENSSFOG00015006414	-	99	80.288	ENSMAMG00000019230	si:dkey-16l2.16	99	80.288	Mastacembelus_armatus
ENSSFOG00015006414	-	85	84.746	ENSMZEG00005002081	si:dkey-16l2.16	99	81.731	Maylandia_zebra
ENSSFOG00015006414	-	94	76.263	ENSMMOG00000020140	si:dkey-16l2.16	99	79.048	Mola_mola
ENSSFOG00015006414	-	99	77.885	ENSMALG00000014727	si:dkey-16l2.16	99	80.769	Monopterus_albus
ENSSFOG00015006414	-	85	85.311	ENSNBRG00000008930	si:dkey-16l2.16	99	82.212	Neolamprologus_brichardi
ENSSFOG00015006414	-	85	85.311	ENSONIG00000009443	si:dkey-16l2.16	99	81.731	Oreochromis_niloticus
ENSSFOG00015006414	-	99	75.845	ENSORLG00000001098	si:dkey-16l2.16	99	75.845	Oryzias_latipes
ENSSFOG00015006414	-	99	75.845	ENSORLG00020000867	si:dkey-16l2.16	99	75.845	Oryzias_latipes_hni
ENSSFOG00015006414	-	93	77.949	ENSOMEG00000015474	si:dkey-16l2.16	99	77.778	Oryzias_melastigma
ENSSFOG00015006414	-	98	76.699	ENSPKIG00000018888	si:dkey-16l2.16	99	76.699	Paramormyrops_kingsleyae
ENSSFOG00015006414	-	85	83.616	ENSPKIG00000005686	-	99	81.250	Paramormyrops_kingsleyae
ENSSFOG00015006414	-	93	76.020	ENSPMGG00000000751	si:dkey-16l2.16	99	78.846	Periophthalmus_magnuspinnatus
ENSSFOG00015006414	-	99	77.404	ENSPFOG00000004746	si:dkey-16l2.16	99	77.404	Poecilia_formosa
ENSSFOG00015006414	-	99	76.923	ENSPLAG00000021043	si:dkey-16l2.16	99	76.923	Poecilia_latipinna
ENSSFOG00015006414	-	99	77.404	ENSPMEG00000007165	si:dkey-16l2.16	99	77.404	Poecilia_mexicana
ENSSFOG00015006414	-	99	76.923	ENSPREG00000005323	si:dkey-16l2.16	99	76.923	Poecilia_reticulata
ENSSFOG00015006414	-	85	85.311	ENSPNYG00000009490	si:dkey-16l2.16	99	82.212	Pundamilia_nyererei
ENSSFOG00015006414	-	93	81.633	ENSPNAG00000018986	si:dkey-16l2.16	99	81.731	Pygocentrus_nattereri
ENSSFOG00015006414	-	99	72.596	ENSSMAG00000011769	si:dkey-16l2.16	93	75.481	Scophthalmus_maximus
ENSSFOG00015006414	-	85	83.616	ENSSDUG00000005719	si:dkey-16l2.16	99	80.288	Seriola_dumerili
ENSSFOG00015006414	-	85	83.616	ENSSLDG00000003631	si:dkey-16l2.16	99	80.288	Seriola_lalandi_dorsalis
ENSSFOG00015006414	-	85	83.616	ENSSPAG00000006302	si:dkey-16l2.16	99	80.288	Stegastes_partitus
ENSSFOG00015006414	-	85	83.616	ENSTRUG00000025076	si:dkey-16l2.16	94	88.235	Takifugu_rubripes
ENSSFOG00015006414	-	93	78.061	ENSTNIG00000011300	si:dkey-16l2.16	99	80.769	Tetraodon_nigroviridis
ENSSFOG00015006414	-	99	77.404	ENSXMAG00000021767	si:dkey-16l2.16	99	77.404	Xiphophorus_maculatus