EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015006610 (Gene tree)
Gene ID: 108933853
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 6146 bases
Position: chrKV411042.1:34250-40395
Accession: 108933853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010163	zf-U11-48K	PF05253.12	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015010302	-	1656	XM_018751222	ENSSFOP00015010163	422 (aa)	XP_018606738	A0A1W5A0N3

Gene Model

Click here to download ENSSFOG00015006610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006610	snrnp48	69	50.168	ENSG00000168566	SNRNP48	84	41.667	Homo_sapiens
ENSSFOG00015006610	snrnp48	68	60.554	ENSAPOG00000021430	snrnp48	73	62.451	Acanthochromis_polyacanthus
ENSSFOG00015006610	snrnp48	74	47.205	ENSAMEG00000017349	SNRNP48	72	49.802	Ailuropoda_melanoleuca
ENSSFOG00015006610	snrnp48	73	55.049	ENSACIG00000002032	snrnp48	72	57.540	Amphilophus_citrinellus
ENSSFOG00015006610	snrnp48	68	60.554	ENSAOCG00000010562	snrnp48	73	62.451	Amphiprion_ocellaris
ENSSFOG00015006610	snrnp48	68	59.862	ENSAPEG00000003231	snrnp48	73	62.055	Amphiprion_percula
ENSSFOG00015006610	snrnp48	69	60.345	ENSATEG00000020210	snrnp48	73	62.055	Anabas_testudineus
ENSSFOG00015006610	snrnp48	68	50.853	ENSACAG00000002811	SNRNP48	62	56.931	Anolis_carolinensis
ENSSFOG00015006610	snrnp48	69	49.662	ENSANAG00000033538	SNRNP48	73	51.779	Aotus_nancymaae
ENSSFOG00015006610	snrnp48	73	59.425	ENSAMXG00000015309	snrnp48	78	62.132	Astyanax_mexicanus
ENSSFOG00015006610	snrnp48	67	47.887	ENSBTAG00000001123	SNRNP48	73	51.190	Bos_taurus
ENSSFOG00015006610	snrnp48	72	48.387	ENSCJAG00000021330	SNRNP48	75	50.187	Callithrix_jacchus
ENSSFOG00015006610	snrnp48	79	46.064	ENSCAFG00000009574	SNRNP48	61	50.598	Canis_familiaris
ENSSFOG00015006610	snrnp48	71	47.896	ENSCAFG00020013203	SNRNP48	73	50.598	Canis_lupus_dingo
ENSSFOG00015006610	snrnp48	67	48.239	ENSCHIG00000015216	SNRNP48	75	50.562	Capra_hircus
ENSSFOG00015006610	snrnp48	67	46.823	ENSCAPG00000006768	SNRNP48	73	51.111	Cavia_aperea
ENSSFOG00015006610	snrnp48	73	46.130	ENSCPOG00000007910	SNRNP48	73	50.988	Cavia_porcellus
ENSSFOG00015006610	snrnp48	68	49.828	ENSCCAG00000035652	SNRNP48	71	52.419	Cebus_capucinus
ENSSFOG00015006610	snrnp48	71	49.196	ENSCATG00000033947	SNRNP48	87	40.458	Cercocebus_atys
ENSSFOG00015006610	snrnp48	70	48.136	ENSCLAG00000003765	SNRNP48	74	51.562	Chinchilla_lanigera
ENSSFOG00015006610	snrnp48	69	50.000	ENSCSAG00000007409	SNRNP48	73	52.174	Chlorocebus_sabaeus
ENSSFOG00015006610	snrnp48	73	47.649	ENSCPBG00000019146	SNRNP48	70	52.889	Chrysemys_picta_bellii
ENSSFOG00015006610	snrnp48	72	30.000	ENSCING00000004121	-	70	31.148	Ciona_intestinalis
ENSSFOG00015006610	snrnp48	69	49.662	ENSCANG00000030017	SNRNP48	73	51.779	Colobus_angolensis_palliatus
ENSSFOG00015006610	snrnp48	68	42.123	ENSCGRG00001008805	-	72	44.538	Cricetulus_griseus_chok1gshd
ENSSFOG00015006610	snrnp48	70	48.161	ENSCGRG00001001076	-	74	50.781	Cricetulus_griseus_chok1gshd
ENSSFOG00015006610	snrnp48	70	48.161	ENSCGRG00000007781	Snrnp48	74	50.781	Cricetulus_griseus_crigri
ENSSFOG00015006610	snrnp48	60	57.874	ENSCSEG00000000722	snrnp48	68	57.490	Cynoglossus_semilaevis
ENSSFOG00015006610	snrnp48	85	56.389	ENSCVAG00000019829	snrnp48	64	61.811	Cyprinodon_variegatus
ENSSFOG00015006610	snrnp48	73	54.693	ENSDARG00000039989	snrnp48	74	56.439	Danio_rerio
ENSSFOG00015006610	snrnp48	71	47.386	ENSDNOG00000014978	SNRNP48	98	36.879	Dasypus_novemcinctus
ENSSFOG00015006610	snrnp48	68	48.097	ENSDORG00000015140	Snrnp48	74	49.606	Dipodomys_ordii
ENSSFOG00015006610	snrnp48	69	48.299	ENSEASG00005012021	SNRNP48	73	50.598	Equus_asinus_asinus
ENSSFOG00015006610	snrnp48	69	48.639	ENSECAG00000026937	SNRNP48	73	50.996	Equus_caballus
ENSSFOG00015006610	snrnp48	70	34.122	ENSEEUG00000015437	SNRNP48	74	33.992	Erinaceus_europaeus
ENSSFOG00015006610	snrnp48	76	59.327	ENSELUG00000009766	snrnp48	72	62.500	Esox_lucius
ENSSFOG00015006610	snrnp48	69	48.299	ENSFCAG00000018853	SNRNP48	73	50.598	Felis_catus
ENSSFOG00015006610	snrnp48	59	55.253	ENSFALG00000007797	SNRNP48	64	59.606	Ficedula_albicollis
ENSSFOG00015006610	snrnp48	59	61.111	ENSGMOG00000018599	-	77	60.784	Gadus_morhua
ENSSFOG00015006610	snrnp48	62	54.244	ENSGALG00000013005	SNRNP48	68	59.113	Gallus_gallus
ENSSFOG00015006610	snrnp48	64	60.073	ENSGAFG00000021639	snrnp48	73	61.569	Gambusia_affinis
ENSSFOG00015006610	snrnp48	60	58.498	ENSGACG00000017756	-	74	58.268	Gasterosteus_aculeatus
ENSSFOG00015006610	snrnp48	69	49.495	ENSGAGG00000000865	SNRNP48	66	56.158	Gopherus_agassizii
ENSSFOG00015006610	snrnp48	69	49.662	ENSGGOG00000013220	SNRNP48	73	51.779	Gorilla_gorilla
ENSSFOG00015006610	snrnp48	62	59.924	ENSHBUG00000017066	snrnp48	72	59.924	Haplochromis_burtoni
ENSSFOG00015006610	snrnp48	69	48.649	ENSHGLG00000015241	SNRNP48	73	50.988	Heterocephalus_glaber_female
ENSSFOG00015006610	snrnp48	69	48.649	ENSHGLG00100010027	SNRNP48	73	50.988	Heterocephalus_glaber_male
ENSSFOG00015006610	snrnp48	59	58.498	ENSHCOG00000014066	snrnp48	71	58.268	Hippocampus_comes
ENSSFOG00015006610	snrnp48	70	48.822	ENSSTOG00000014635	SNRNP48	74	50.787	Ictidomys_tridecemlineatus
ENSSFOG00015006610	snrnp48	68	47.222	ENSJJAG00000011495	Snrnp48	73	50.199	Jaculus_jaculus
ENSSFOG00015006610	snrnp48	75	56.467	ENSKMAG00000016514	snrnp48	74	60.465	Kryptolebias_marmoratus
ENSSFOG00015006610	snrnp48	62	60.305	ENSLBEG00000026249	snrnp48	73	60.392	Labrus_bergylta
ENSSFOG00015006610	snrnp48	78	50.147	ENSLACG00000003958	SNRNP48	74	54.688	Latimeria_chalumnae
ENSSFOG00015006610	snrnp48	71	61.794	ENSLOCG00000004187	snrnp48	75	65.625	Lepisosteus_oculatus
ENSSFOG00015006610	snrnp48	69	47.782	ENSLAFG00000011152	SNRNP48	73	50.400	Loxodonta_africana
ENSSFOG00015006610	snrnp48	69	50.000	ENSMFAG00000045216	SNRNP48	87	41.221	Macaca_fascicularis
ENSSFOG00015006610	snrnp48	69	50.000	ENSMMUG00000014785	SNRNP48	73	52.174	Macaca_mulatta
ENSSFOG00015006610	snrnp48	69	50.000	ENSMNEG00000042269	SNRNP48	73	52.174	Macaca_nemestrina
ENSSFOG00015006610	snrnp48	69	50.000	ENSMLEG00000034004	SNRNP48	87	41.221	Mandrillus_leucophaeus
ENSSFOG00015006610	snrnp48	65	60.145	ENSMAMG00000018673	snrnp48	64	61.660	Mastacembelus_armatus
ENSSFOG00015006610	snrnp48	70	50.974	ENSMGAG00000006037	SNRNP48	68	59.606	Meleagris_gallopavo
ENSSFOG00015006610	snrnp48	66	48.944	ENSMAUG00000011944	Snrnp48	74	50.787	Mesocricetus_auratus
ENSSFOG00015006610	snrnp48	70	49.164	ENSMICG00000012497	SNRNP48	74	51.953	Microcebus_murinus
ENSSFOG00015006610	snrnp48	72	47.727	ENSMOCG00000015555	Snrnp48	74	51.575	Microtus_ochrogaster
ENSSFOG00015006610	snrnp48	72	47.516	ENSMODG00000009996	SNRNP48	76	48.227	Monodelphis_domestica
ENSSFOG00015006610	snrnp48	66	58.719	ENSMALG00000005725	snrnp48	73	60.547	Monopterus_albus
ENSSFOG00015006610	snrnp48	70	47.826	MGP_CAROLIEiJ_G0018441	Snrnp48	74	51.562	Mus_caroli
ENSSFOG00015006610	snrnp48	70	47.826	ENSMUSG00000021431	Snrnp48	74	51.562	Mus_musculus
ENSSFOG00015006610	snrnp48	64	50.909	MGP_PahariEiJ_G0019509	Snrnp48	74	51.953	Mus_pahari
ENSSFOG00015006610	snrnp48	70	48.495	MGP_SPRETEiJ_G0019321	Snrnp48	74	51.953	Mus_spretus
ENSSFOG00015006610	snrnp48	84	44.538	ENSNGAG00000004849	Snrnp48	61	45.977	Nannospalax_galili
ENSSFOG00015006610	snrnp48	62	59.924	ENSNBRG00000012127	snrnp48	73	59.924	Neolamprologus_brichardi
ENSSFOG00015006610	snrnp48	69	49.662	ENSNLEG00000011667	SNRNP48	73	51.779	Nomascus_leucogenys
ENSSFOG00015006610	snrnp48	60	49.609	ENSOPRG00000015471	SNRNP48	78	49.407	Ochotona_princeps
ENSSFOG00015006610	snrnp48	76	56.386	ENSONIG00000001520	snrnp48	73	60.687	Oreochromis_niloticus
ENSSFOG00015006610	snrnp48	67	48.410	ENSOCUG00000005168	SNRNP48	82	50.397	Oryctolagus_cuniculus
ENSSFOG00015006610	snrnp48	72	60.596	ENSORLG00000015654	snrnp48	70	62.500	Oryzias_latipes
ENSSFOG00015006610	snrnp48	72	59.934	ENSORLG00020015976	snrnp48	60	60.887	Oryzias_latipes_hni
ENSSFOG00015006610	snrnp48	72	59.934	ENSORLG00015022379	snrnp48	60	60.887	Oryzias_latipes_hsok
ENSSFOG00015006610	snrnp48	68	61.592	ENSOMEG00000022007	snrnp48	71	63.710	Oryzias_melastigma
ENSSFOG00015006610	snrnp48	75	44.643	ENSOGAG00000005275	SNRNP48	78	48.881	Otolemur_garnettii
ENSSFOG00015006610	snrnp48	59	51.210	ENSOARG00000017319	SNRNP48	71	54.106	Ovis_aries
ENSSFOG00015006610	snrnp48	69	49.662	ENSPPAG00000032873	SNRNP48	73	51.779	Pan_paniscus
ENSSFOG00015006610	snrnp48	68	48.611	ENSPPRG00000004283	SNRNP48	73	50.598	Panthera_pardus
ENSSFOG00015006610	snrnp48	59	50.806	ENSPTIG00000013502	SNRNP48	71	54.146	Panthera_tigris_altaica
ENSSFOG00015006610	snrnp48	69	49.662	ENSPTRG00000017703	SNRNP48	73	51.779	Pan_troglodytes
ENSSFOG00015006610	snrnp48	69	50.000	ENSPANG00000000771	SNRNP48	87	41.221	Papio_anubis
ENSSFOG00015006610	snrnp48	98	53.445	ENSPKIG00000013703	snrnp48	54	68.093	Paramormyrops_kingsleyae
ENSSFOG00015006610	snrnp48	68	48.701	ENSPSIG00000002213	SNRNP48	70	54.260	Pelodiscus_sinensis
ENSSFOG00015006610	snrnp48	61	56.420	ENSPMGG00000008120	snrnp48	89	55.952	Periophthalmus_magnuspinnatus
ENSSFOG00015006610	snrnp48	70	49.158	ENSPEMG00000008872	Snrnp48	74	51.969	Peromyscus_maniculatus_bairdii
ENSSFOG00015006610	snrnp48	67	60.351	ENSPFOG00000003578	snrnp48	73	62.745	Poecilia_formosa
ENSSFOG00015006610	snrnp48	59	58.175	ENSPLAG00000002290	snrnp48	89	58.175	Poecilia_latipinna
ENSSFOG00015006610	snrnp48	67	60.351	ENSPMEG00000018033	snrnp48	73	62.745	Poecilia_mexicana
ENSSFOG00015006610	snrnp48	60	61.811	ENSPREG00000018541	snrnp48	73	61.569	Poecilia_reticulata
ENSSFOG00015006610	snrnp48	69	48.649	ENSPPYG00000016209	SNRNP48	73	50.794	Pongo_abelii
ENSSFOG00015006610	snrnp48	57	39.506	ENSPCAG00000011991	SNRNP48	92	39.357	Procavia_capensis
ENSSFOG00015006610	snrnp48	69	49.662	ENSPVAG00000002854	SNRNP48	73	51.779	Pteropus_vampyrus
ENSSFOG00015006610	snrnp48	76	49.387	ENSPNYG00000015399	snrnp48	80	59.924	Pundamilia_nyererei
ENSSFOG00015006610	snrnp48	70	49.164	ENSRNOG00000013756	Snrnp48	74	51.953	Rattus_norvegicus
ENSSFOG00015006610	snrnp48	69	50.000	ENSRBIG00000043856	SNRNP48	78	52.174	Rhinopithecus_bieti
ENSSFOG00015006610	snrnp48	69	50.000	ENSRROG00000043229	SNRNP48	73	52.174	Rhinopithecus_roxellana
ENSSFOG00015006610	snrnp48	69	50.338	ENSSBOG00000019486	SNRNP48	73	52.569	Saimiri_boliviensis_boliviensis
ENSSFOG00015006610	snrnp48	71	48.860	ENSSHAG00000014483	SNRNP48	73	49.813	Sarcophilus_harrisii
ENSSFOG00015006610	snrnp48	73	57.980	ENSSDUG00000014953	snrnp48	73	59.127	Seriola_dumerili
ENSSFOG00015006610	snrnp48	73	57.655	ENSSLDG00000005989	snrnp48	73	58.730	Seriola_lalandi_dorsalis
ENSSFOG00015006610	snrnp48	69	48.495	ENSSPUG00000006257	SNRNP48	59	54.286	Sphenodon_punctatus
ENSSFOG00015006610	snrnp48	69	61.092	ENSSPAG00000006454	snrnp48	74	63.035	Stegastes_partitus
ENSSFOG00015006610	snrnp48	68	53.512	ENSTGUG00000007575	SNRNP48	66	59.524	Taeniopygia_guttata
ENSSFOG00015006610	snrnp48	60	56.746	ENSTRUG00000007031	snrnp48	73	56.746	Takifugu_rubripes
ENSSFOG00015006610	snrnp48	60	58.893	ENSTNIG00000012977	-	75	58.498	Tetraodon_nigroviridis
ENSSFOG00015006610	snrnp48	62	50.000	ENSTBEG00000015620	SNRNP48	74	50.391	Tupaia_belangeri
ENSSFOG00015006610	snrnp48	67	49.477	ENSTTRG00000016715	SNRNP48	73	51.779	Tursiops_truncatus
ENSSFOG00015006610	snrnp48	71	48.052	ENSUAMG00000003690	SNRNP48	73	50.400	Ursus_americanus
ENSSFOG00015006610	snrnp48	59	52.610	ENSVPAG00000003557	SNRNP48	71	55.825	Vicugna_pacos
ENSSFOG00015006610	snrnp48	74	47.368	ENSVVUG00000004996	SNRNP48	75	49.434	Vulpes_vulpes
ENSSFOG00015006610	snrnp48	70	44.595	ENSXETG00000020447	snrnp48	70	49.383	Xenopus_tropicalis
ENSSFOG00015006610	snrnp48	56	61.345	ENSXCOG00000004478	snrnp48	72	61.345	Xiphophorus_couchianus
ENSSFOG00015006610	snrnp48	67	60.000	ENSXMAG00000013595	snrnp48	73	62.353	Xiphophorus_maculatus