EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015006796 (Gene tree)
Gene ID: 108928728
Gene Symbol: -
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5642 bases
Position: chrKV410892.1:3665862-3671503
Accession: 108928728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010454	RRM_1	PF00076.22	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015010596	-	1701	XM_018742795	ENSSFOP00015010454	246 (aa)	XP_018598311	A0A1W4ZCQ8

Gene Model

Click here to download ENSSFOG00015006796's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG
sfm05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006796	-	89	57.273	ENSANAG00000019399	SRSF7	82	75.221	Aotus_nancymaae
ENSSFOG00015006796	-	72	84.746	ENSAMXG00000031648	-	76	80.319	Astyanax_mexicanus
ENSSFOG00015006796	-	80	54.502	ENSAMXG00000007005	srsf7b	58	72.358	Astyanax_mexicanus
ENSSFOG00015006796	-	50	55.200	ENSCAFG00020013547	-	69	56.250	Canis_lupus_dingo
ENSSFOG00015006796	-	51	90.551	ENSCSEG00000006378	srsf7a	87	90.244	Cynoglossus_semilaevis
ENSSFOG00015006796	-	59	54.483	ENSCVAG00000009865	-	57	70.930	Cyprinodon_variegatus
ENSSFOG00015006796	-	96	74.308	ENSDARG00000035325	srsf7a	100	93.151	Danio_rerio
ENSSFOG00015006796	-	61	54.194	ENSEBUG00000002677	-	57	64.368	Eptatretus_burgeri
ENSSFOG00015006796	-	100	61.961	ENSGMOG00000002004	srsf7a	54	88.095	Gadus_morhua
ENSSFOG00015006796	-	52	65.891	ENSGAFG00000008856	srsf7b	80	72.973	Gambusia_affinis
ENSSFOG00015006796	-	73	79.444	ENSIPUG00000007928	-	76	78.191	Ictalurus_punctatus
ENSSFOG00015006796	-	62	49.032	ENSJJAG00000020230	-	69	58.772	Jaculus_jaculus
ENSSFOG00015006796	-	68	46.429	ENSMAUG00000011430	-	57	56.977	Mesocricetus_auratus
ENSSFOG00015006796	-	50	91.935	ENSMMOG00000005208	srsf7a	81	91.935	Mola_mola
ENSSFOG00015006796	-	96	80.816	ENSPKIG00000008209	-	91	83.268	Paramormyrops_kingsleyae
ENSSFOG00015006796	-	55	69.118	ENSPKIG00000017425	srsf7b	64	76.106	Paramormyrops_kingsleyae
ENSSFOG00015006796	-	50	89.344	ENSPREG00000020685	srsf7a	91	89.744	Poecilia_reticulata
ENSSFOG00015006796	-	64	46.835	ENSPNYG00000013747	-	56	70.930	Pundamilia_nyererei
ENSSFOG00015006796	-	78	79.275	ENSPNAG00000000149	-	76	81.383	Pygocentrus_nattereri
ENSSFOG00015006796	-	69	52.632	ENSRNOG00000008398	AABR07055789.1	67	65.766	Rattus_norvegicus
ENSSFOG00015006796	-	52	91.339	ENSSPAG00000022192	srsf7a	93	92.308	Stegastes_partitus
ENSSFOG00015006796	-	53	47.328	ENSUAMG00000018039	SRSF3	55	70.930	Ursus_americanus
ENSSFOG00015006796	-	59	47.712	ENSVVUG00000006092	-	69	61.111	Vulpes_vulpes
ENSSFOG00015006796	-	50	90.164	ENSXCOG00000009381	srsf7a	91	90.598	Xiphophorus_couchianus