EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015006974 (Gene tree)
Gene ID: 108924824
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12712 bases
Position: chrKV410836.1:2428486-2441197
Accession: 108924824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010744	Symplekin_C	PF12295.8	2.7e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015010890	-	4246	XM_018736412	ENSSFOP00015010744	1243 (aa)	XP_018591928	A0A1W4YK23

Gene Model

Click here to download ENSSFOG00015006974's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03015	mRNA surveillance pathway	KEGG
sfm04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015006974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015006974	sympk	90	76.004	ENSG00000125755	SYMPK	100	81.119	Homo_sapiens
ENSSFOG00015006974	sympk	95	81.657	ENSAPOG00000015934	sympk	98	82.934	Acanthochromis_polyacanthus
ENSSFOG00015006974	sympk	90	76.271	ENSAMEG00000000680	SYMPK	87	76.271	Ailuropoda_melanoleuca
ENSSFOG00015006974	sympk	88	84.244	ENSACIG00000006357	sympk	92	84.244	Amphilophus_citrinellus
ENSSFOG00015006974	sympk	94	82.620	ENSAOCG00000024124	sympk	98	79.772	Amphiprion_ocellaris
ENSSFOG00015006974	sympk	94	82.534	ENSAPEG00000003465	sympk	98	79.608	Amphiprion_percula
ENSSFOG00015006974	sympk	98	80.213	ENSATEG00000008472	sympk	91	85.099	Anabas_testudineus
ENSSFOG00015006974	sympk	81	74.328	ENSACAG00000004126	SYMPK	83	74.328	Anolis_carolinensis
ENSSFOG00015006974	sympk	90	76.182	ENSANAG00000021087	SYMPK	99	76.586	Aotus_nancymaae
ENSSFOG00015006974	sympk	91	82.476	ENSACLG00000001813	sympk	98	78.606	Astatotilapia_calliptera
ENSSFOG00015006974	sympk	92	81.513	ENSAMXG00000013677	sympk	94	81.943	Astyanax_mexicanus
ENSSFOG00015006974	sympk	90	76.004	ENSBTAG00000012101	SYMPK	87	76.004	Bos_taurus
ENSSFOG00015006974	sympk	90	76.182	ENSCJAG00000012172	SYMPK	99	75.000	Callithrix_jacchus
ENSSFOG00015006974	sympk	90	76.271	ENSCAFG00000004376	SYMPK	87	76.271	Canis_familiaris
ENSSFOG00015006974	sympk	90	76.271	ENSCAFG00020001815	SYMPK	87	76.271	Canis_lupus_dingo
ENSSFOG00015006974	sympk	90	76.093	ENSCHIG00000026784	SYMPK	87	76.093	Capra_hircus
ENSSFOG00015006974	sympk	91	75.463	ENSTSYG00000006268	SYMPK	95	74.457	Carlito_syrichta
ENSSFOG00015006974	sympk	87	74.259	ENSCAPG00000005112	SYMPK	96	74.259	Cavia_aperea
ENSSFOG00015006974	sympk	90	75.890	ENSCPOG00000010434	SYMPK	89	75.890	Cavia_porcellus
ENSSFOG00015006974	sympk	90	76.182	ENSCCAG00000036309	SYMPK	99	76.362	Cebus_capucinus
ENSSFOG00015006974	sympk	91	75.463	ENSCATG00000045107	SYMPK	99	76.248	Cercocebus_atys
ENSSFOG00015006974	sympk	92	74.934	ENSCLAG00000001206	SYMPK	89	74.934	Chinchilla_lanigera
ENSSFOG00015006974	sympk	90	76.093	ENSCSAG00000003115	SYMPK	87	76.093	Chlorocebus_sabaeus
ENSSFOG00015006974	sympk	72	90.909	ENSCHOG00000012456	SYMPK	81	90.909	Choloepus_hoffmanni
ENSSFOG00015006974	sympk	90	75.597	ENSCPBG00000007170	SYMPK	89	75.597	Chrysemys_picta_bellii
ENSSFOG00015006974	sympk	86	47.786	ENSCING00000021232	-	97	47.786	Ciona_intestinalis
ENSSFOG00015006974	sympk	84	47.664	ENSCSAVG00000005154	-	100	48.041	Ciona_savignyi
ENSSFOG00015006974	sympk	91	74.780	ENSCANG00000040907	SYMPK	99	74.359	Colobus_angolensis_palliatus
ENSSFOG00015006974	sympk	81	78.846	ENSCGRG00001010086	Sympk	85	78.846	Cricetulus_griseus_chok1gshd
ENSSFOG00015006974	sympk	94	78.613	ENSCSEG00000016802	sympk	91	82.285	Cynoglossus_semilaevis
ENSSFOG00015006974	sympk	99	75.218	ENSDARG00000059553	sympk	99	75.178	Danio_rerio
ENSSFOG00015006974	sympk	90	76.093	ENSDNOG00000016149	SYMPK	86	76.093	Dasypus_novemcinctus
ENSSFOG00015006974	sympk	86	36.770	FBgn0037371	Sym	91	36.780	Drosophila_melanogaster
ENSSFOG00015006974	sympk	68	61.485	ENSEBUG00000000387	sympk	88	61.485	Eptatretus_burgeri
ENSSFOG00015006974	sympk	90	76.360	ENSEASG00005014227	SYMPK	87	76.360	Equus_asinus_asinus
ENSSFOG00015006974	sympk	90	76.360	ENSECAG00000008163	SYMPK	87	76.360	Equus_caballus
ENSSFOG00015006974	sympk	71	75.209	ENSEEUG00000000270	-	81	75.209	Erinaceus_europaeus
ENSSFOG00015006974	sympk	90	85.497	ENSELUG00000000850	sympk	100	79.308	Esox_lucius
ENSSFOG00015006974	sympk	90	76.271	ENSFCAG00000007337	SYMPK	87	76.271	Felis_catus
ENSSFOG00015006974	sympk	90	75.825	ENSFDAG00000011272	SYMPK	87	75.825	Fukomys_damarensis
ENSSFOG00015006974	sympk	89	83.303	ENSFHEG00000010274	sympk	90	83.303	Fundulus_heteroclitus
ENSSFOG00015006974	sympk	87	81.481	ENSGMOG00000002357	sympk	99	81.759	Gadus_morhua
ENSSFOG00015006974	sympk	89	82.849	ENSGAFG00000010976	sympk	97	77.750	Gambusia_affinis
ENSSFOG00015006974	sympk	99	76.954	ENSGACG00000002735	sympk	99	82.734	Gasterosteus_aculeatus
ENSSFOG00015006974	sympk	63	68.640	ENSGAGG00000012538	-	88	74.135	Gopherus_agassizii
ENSSFOG00015006974	sympk	90	76.004	ENSGGOG00000003410	SYMPK	97	75.900	Gorilla_gorilla
ENSSFOG00015006974	sympk	91	82.476	ENSHBUG00000023564	sympk	98	78.606	Haplochromis_burtoni
ENSSFOG00015006974	sympk	90	71.543	ENSHGLG00000005228	SYMPK	87	71.543	Heterocephalus_glaber_female
ENSSFOG00015006974	sympk	90	75.914	ENSHGLG00100018571	SYMPK	89	75.914	Heterocephalus_glaber_male
ENSSFOG00015006974	sympk	89	77.597	ENSHCOG00000017400	sympk	91	77.387	Hippocampus_comes
ENSSFOG00015006974	sympk	90	82.691	ENSIPUG00000024020	SYMPK	100	75.851	Ictalurus_punctatus
ENSSFOG00015006974	sympk	90	76.539	ENSSTOG00000001534	SYMPK	87	76.539	Ictidomys_tridecemlineatus
ENSSFOG00015006974	sympk	90	75.914	ENSJJAG00000006633	Sympk	87	75.914	Jaculus_jaculus
ENSSFOG00015006974	sympk	88	84.384	ENSKMAG00000016292	sympk	89	84.475	Kryptolebias_marmoratus
ENSSFOG00015006974	sympk	96	80.302	ENSLBEG00000027913	sympk	95	81.981	Labrus_bergylta
ENSSFOG00015006974	sympk	90	71.314	ENSLACG00000016497	SYMPK	92	71.188	Latimeria_chalumnae
ENSSFOG00015006974	sympk	90	76.450	ENSLAFG00000008726	SYMPK	87	76.450	Loxodonta_africana
ENSSFOG00015006974	sympk	90	76.093	ENSMMUG00000015428	SYMPK	93	74.185	Macaca_mulatta
ENSSFOG00015006974	sympk	91	75.197	ENSMNEG00000019439	SYMPK	99	76.248	Macaca_nemestrina
ENSSFOG00015006974	sympk	90	76.093	ENSMLEG00000040508	SYMPK	99	76.248	Mandrillus_leucophaeus
ENSSFOG00015006974	sympk	94	82.146	ENSMAMG00000010486	sympk	98	79.133	Mastacembelus_armatus
ENSSFOG00015006974	sympk	91	82.476	ENSMZEG00005014146	sympk	98	78.606	Maylandia_zebra
ENSSFOG00015006974	sympk	89	75.518	ENSMAUG00000015657	Sympk	86	75.518	Mesocricetus_auratus
ENSSFOG00015006974	sympk	90	75.914	ENSMICG00000001871	SYMPK	92	74.642	Microcebus_murinus
ENSSFOG00015006974	sympk	90	76.004	ENSMOCG00000008388	Sympk	86	76.004	Microtus_ochrogaster
ENSSFOG00015006974	sympk	93	79.654	ENSMMOG00000019227	sympk	93	82.321	Mola_mola
ENSSFOG00015006974	sympk	90	75.804	ENSMODG00000021534	SYMPK	87	75.758	Monodelphis_domestica
ENSSFOG00015006974	sympk	77	79.372	ENSMALG00000008347	sympk	97	79.686	Monopterus_albus
ENSSFOG00015006974	sympk	90	75.914	MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	Mus_caroli
ENSSFOG00015006974	sympk	90	75.825	ENSMUSG00000023118	Sympk	76	87.156	Mus_musculus
ENSSFOG00015006974	sympk	90	75.914	MGP_PahariEiJ_G0021127	Sympk	77	87.156	Mus_pahari
ENSSFOG00015006974	sympk	99	69.623	MGP_SPRETEiJ_G0030351	-	77	87.156	Mus_spretus
ENSSFOG00015006974	sympk	90	74.755	ENSMPUG00000005505	SYMPK	87	74.755	Mustela_putorius_furo
ENSSFOG00015006974	sympk	72	73.073	ENSMLUG00000001359	SYMPK	91	72.035	Myotis_lucifugus
ENSSFOG00015006974	sympk	90	75.914	ENSNGAG00000000820	Sympk	87	75.914	Nannospalax_galili
ENSSFOG00015006974	sympk	88	82.824	ENSNBRG00000018101	sympk	95	82.824	Neolamprologus_brichardi
ENSSFOG00015006974	sympk	90	62.214	ENSNLEG00000002369	SYMPK	86	65.333	Nomascus_leucogenys
ENSSFOG00015006974	sympk	72	83.607	ENSMEUG00000003866	SYMPK	70	83.607	Notamacropus_eugenii
ENSSFOG00015006974	sympk	90	74.664	ENSOPRG00000009967	SYMPK	89	73.560	Ochotona_princeps
ENSSFOG00015006974	sympk	98	70.942	ENSODEG00000007519	SYMPK	87	76.091	Octodon_degus
ENSSFOG00015006974	sympk	91	82.348	ENSONIG00000016802	sympk	99	82.348	Oreochromis_niloticus
ENSSFOG00015006974	sympk	79	74.872	ENSOCUG00000005511	SYMPK	90	74.872	Oryctolagus_cuniculus
ENSSFOG00015006974	sympk	89	83.318	ENSORLG00000015338	sympk	96	82.322	Oryzias_latipes
ENSSFOG00015006974	sympk	98	77.506	ENSORLG00020004402	sympk	91	83.228	Oryzias_latipes_hni
ENSSFOG00015006974	sympk	89	83.138	ENSORLG00015005712	sympk	91	83.138	Oryzias_latipes_hsok
ENSSFOG00015006974	sympk	93	81.739	ENSOMEG00000022561	sympk	99	77.814	Oryzias_melastigma
ENSSFOG00015006974	sympk	90	76.450	ENSOGAG00000013483	SYMPK	87	76.450	Otolemur_garnettii
ENSSFOG00015006974	sympk	89	73.321	ENSOARG00000010349	SYMPK	87	73.321	Ovis_aries
ENSSFOG00015006974	sympk	90	76.004	ENSPPAG00000043204	SYMPK	94	74.049	Pan_paniscus
ENSSFOG00015006974	sympk	90	76.271	ENSPPRG00000004282	SYMPK	87	76.271	Panthera_pardus
ENSSFOG00015006974	sympk	90	76.271	ENSPTIG00000015420	SYMPK	93	76.271	Panthera_tigris_altaica
ENSSFOG00015006974	sympk	90	76.004	ENSPTRG00000011169	SYMPK	94	74.049	Pan_troglodytes
ENSSFOG00015006974	sympk	90	76.093	ENSPANG00000019930	SYMPK	99	76.248	Papio_anubis
ENSSFOG00015006974	sympk	100	86.967	ENSPKIG00000017132	sympk	100	87.369	Paramormyrops_kingsleyae
ENSSFOG00015006974	sympk	90	75.801	ENSPEMG00000007564	Sympk	87	75.801	Peromyscus_maniculatus_bairdii
ENSSFOG00015006974	sympk	83	65.038	ENSPMAG00000004936	sympk	100	65.134	Petromyzon_marinus
ENSSFOG00015006974	sympk	96	71.927	ENSPCIG00000024476	SYMPK	91	73.425	Phascolarctos_cinereus
ENSSFOG00015006974	sympk	89	83.046	ENSPFOG00000001194	sympk	92	81.956	Poecilia_formosa
ENSSFOG00015006974	sympk	89	83.046	ENSPLAG00000012995	sympk	92	81.956	Poecilia_latipinna
ENSSFOG00015006974	sympk	89	83.046	ENSPMEG00000008099	sympk	92	81.956	Poecilia_mexicana
ENSSFOG00015006974	sympk	89	82.849	ENSPREG00000006176	sympk	92	81.179	Poecilia_reticulata
ENSSFOG00015006974	sympk	90	75.961	ENSPPYG00000010135	SYMPK	99	75.961	Pongo_abelii
ENSSFOG00015006974	sympk	84	79.326	ENSPCAG00000005182	SYMPK	80	79.326	Procavia_capensis
ENSSFOG00015006974	sympk	91	75.109	ENSPCOG00000023740	SYMPK	99	76.133	Propithecus_coquereli
ENSSFOG00015006974	sympk	90	74.844	ENSPVAG00000001355	SYMPK	89	74.844	Pteropus_vampyrus
ENSSFOG00015006974	sympk	91	82.563	ENSPNYG00000011455	sympk	98	78.606	Pundamilia_nyererei
ENSSFOG00015006974	sympk	99	78.897	ENSPNAG00000016505	sympk	99	78.206	Pygocentrus_nattereri
ENSSFOG00015006974	sympk	90	76.093	ENSRNOG00000014353	Sympk	86	76.093	Rattus_norvegicus
ENSSFOG00015006974	sympk	91	75.463	ENSRBIG00000040963	SYMPK	99	76.471	Rhinopithecus_bieti
ENSSFOG00015006974	sympk	90	76.093	ENSRROG00000024834	SYMPK	97	76.104	Rhinopithecus_roxellana
ENSSFOG00015006974	sympk	90	76.093	ENSSBOG00000034497	SYMPK	95	74.321	Saimiri_boliviensis_boliviensis
ENSSFOG00015006974	sympk	90	74.689	ENSSHAG00000003139	SYMPK	97	74.689	Sarcophilus_harrisii
ENSSFOG00015006974	sympk	94	80.920	ENSSMAG00000018130	sympk	79	78.659	Scophthalmus_maximus
ENSSFOG00015006974	sympk	98	79.918	ENSSDUG00000007092	sympk	99	79.918	Seriola_dumerili
ENSSFOG00015006974	sympk	98	79.836	ENSSLDG00000014774	sympk	99	79.836	Seriola_lalandi_dorsalis
ENSSFOG00015006974	sympk	57	87.692	ENSSARG00000004274	-	61	87.692	Sorex_araneus
ENSSFOG00015006974	sympk	91	75.197	ENSSPUG00000002789	SYMPK	87	75.197	Sphenodon_punctatus
ENSSFOG00015006974	sympk	88	85.923	ENSSPAG00000000854	sympk	97	80.948	Stegastes_partitus
ENSSFOG00015006974	sympk	90	76.182	ENSSSCG00000003093	SYMPK	87	76.182	Sus_scrofa
ENSSFOG00015006974	sympk	98	78.455	ENSTRUG00000010202	sympk	99	78.420	Takifugu_rubripes
ENSSFOG00015006974	sympk	88	83.227	ENSTNIG00000017855	sympk	97	83.212	Tetraodon_nigroviridis
ENSSFOG00015006974	sympk	80	88.312	ENSTBEG00000000454	SYMPK	77	88.312	Tupaia_belangeri
ENSSFOG00015006974	sympk	90	67.886	ENSTTRG00000014311	SYMPK	87	67.886	Tursiops_truncatus
ENSSFOG00015006974	sympk	90	74.487	ENSUAMG00000022272	SYMPK	95	74.502	Ursus_americanus
ENSSFOG00015006974	sympk	90	76.271	ENSUMAG00000023698	SYMPK	87	76.271	Ursus_maritimus
ENSSFOG00015006974	sympk	91	75.638	ENSVVUG00000003024	SYMPK	97	75.638	Vulpes_vulpes
ENSSFOG00015006974	sympk	97	67.076	ENSXETG00000024453	sympk	99	67.158	Xenopus_tropicalis
ENSSFOG00015006974	sympk	87	81.567	ENSXCOG00000015368	sympk	99	81.567	Xiphophorus_couchianus
ENSSFOG00015006974	sympk	89	82.849	ENSXMAG00000005737	sympk	99	76.786	Xiphophorus_maculatus