EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015007002 (Gene tree)
Gene ID: 108921897
Gene Symbol: snrpd3l (1 of many)
Alias: -
Full Name: small nuclear ribonucleoprotein Sm D3-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2271 bases
Position: chrKV410808.1:4100156-4102426
Accession: 108921897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010792	LSM	PF01423.22	1.5e-15	1	1
ENSSFOP00015010798	LSM	PF01423.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015010939	-	1375	XM_018731626	ENSSFOP00015010792	127 (aa)	XP_018587142	A0A0P7W7Q3
ENSSFOT00015010945	-	763	XM_018731624	ENSSFOP00015010798	127 (aa)	XP_018587140	A0A0P7W7Q3

Gene Model

Click here to download ENSSFOG00015007002's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015007002	snrpd3l	65	31.325	ENSSFOG00015022253	-	66	31.325
ENSSFOG00015007002	snrpd3l	65	31.325	ENSSFOG00015008809	-	66	31.325
ENSSFOG00015007002	snrpd3l	100	96.850	ENSSFOG00015014180	snrpd3l	100	96.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007002	snrpd3l	100	96.850	ENSG00000100028	SNRPD3	98	100.000	Homo_sapiens
ENSSFOG00015007002	snrpd3l	100	97.638	ENSAPOG00000007512	snrpd3l	100	97.638	Acanthochromis_polyacanthus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSAMEG00000013935	SNRPD3	100	96.850	Ailuropoda_melanoleuca
ENSSFOG00015007002	snrpd3l	100	97.638	ENSACIG00000008871	snrpd3l	100	97.638	Amphilophus_citrinellus
ENSSFOG00015007002	snrpd3l	100	97.638	ENSAOCG00000022442	-	100	97.638	Amphiprion_ocellaris
ENSSFOG00015007002	snrpd3l	100	97.638	ENSAOCG00000008497	SNRPD3	100	97.638	Amphiprion_ocellaris
ENSSFOG00015007002	snrpd3l	100	97.638	ENSAOCG00000016743	snrpd3l	100	97.638	Amphiprion_ocellaris
ENSSFOG00015007002	snrpd3l	83	98.113	ENSAOCG00000016759	-	98	98.113	Amphiprion_ocellaris
ENSSFOG00015007002	snrpd3l	83	98.113	ENSAPEG00000006260	-	98	98.113	Amphiprion_percula
ENSSFOG00015007002	snrpd3l	100	97.638	ENSAPEG00000006273	snrpd3l	100	97.638	Amphiprion_percula
ENSSFOG00015007002	snrpd3l	100	97.638	ENSATEG00000020556	snrpd3l	91	97.638	Anabas_testudineus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSAPLG00000008670	SNRPD3	100	96.850	Anas_platyrhynchos
ENSSFOG00015007002	snrpd3l	100	96.850	ENSANAG00000026106	SNRPD3	100	96.850	Aotus_nancymaae
ENSSFOG00015007002	snrpd3l	100	97.638	ENSACLG00000021295	snrpd3l	100	97.638	Astatotilapia_calliptera
ENSSFOG00015007002	snrpd3l	100	96.875	ENSAMXG00000038984	snrpd3l	100	96.875	Astyanax_mexicanus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSBTAG00000021262	SNRPD3	100	96.850	Bos_taurus
ENSSFOG00015007002	snrpd3l	90	64.348	WBGene00004914	snr-1	63	74.118	Caenorhabditis_elegans
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCJAG00000009630	SNRPD3	100	96.850	Callithrix_jacchus
ENSSFOG00015007002	snrpd3l	100	96.063	ENSCAFG00000017258	-	100	96.063	Canis_familiaris
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCAFG00000013864	-	100	96.850	Canis_familiaris
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCAFG00020007165	-	100	96.850	Canis_lupus_dingo
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCHIG00000000057	SNRPD3	100	96.850	Capra_hircus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSTSYG00000007649	SNRPD3	100	96.850	Carlito_syrichta
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCAPG00000016432	-	100	96.850	Cavia_aperea
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCPOG00000033102	-	100	96.850	Cavia_porcellus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCCAG00000035006	SNRPD3	100	96.850	Cebus_capucinus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCATG00000038878	SNRPD3	100	96.850	Cercocebus_atys
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCLAG00000011403	SNRPD3	100	96.850	Chinchilla_lanigera
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCSAG00000010694	SNRPD3	100	96.850	Chlorocebus_sabaeus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCPBG00000002065	SNRPD3	100	96.850	Chrysemys_picta_bellii
ENSSFOG00015007002	snrpd3l	84	79.439	ENSCSAVG00000004708	-	80	78.505	Ciona_savignyi
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCANG00000032106	SNRPD3	100	96.850	Colobus_angolensis_palliatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCGRG00001021990	Snrpd3	100	96.850	Cricetulus_griseus_chok1gshd
ENSSFOG00015007002	snrpd3l	100	96.850	ENSCGRG00000004280	Snrpd3	100	96.850	Cricetulus_griseus_crigri
ENSSFOG00015007002	snrpd3l	100	97.638	ENSCVAG00000001276	snrpd3l	100	97.638	Cyprinodon_variegatus
ENSSFOG00015007002	snrpd3l	100	96.875	ENSDARG00000076283	snrpd3l	100	96.875	Danio_rerio
ENSSFOG00015007002	snrpd3l	100	95.276	ENSDARG00000013800	snrpd3	100	95.276	Danio_rerio
ENSSFOG00015007002	snrpd3l	100	86.923	ENSDNOG00000018004	-	100	84.615	Dasypus_novemcinctus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSDNOG00000047424	-	100	96.850	Dasypus_novemcinctus
ENSSFOG00015007002	snrpd3l	97	74.797	ENSDNOG00000042638	-	100	72.358	Dasypus_novemcinctus
ENSSFOG00015007002	snrpd3l	100	81.890	ENSDORG00000027706	-	100	79.528	Dipodomys_ordii
ENSSFOG00015007002	snrpd3l	100	71.654	ENSDORG00000027169	-	100	67.717	Dipodomys_ordii
ENSSFOG00015007002	snrpd3l	87	88.288	ENSDORG00000002800	-	100	84.685	Dipodomys_ordii
ENSSFOG00015007002	snrpd3l	83	83.962	FBgn0023167	SmD3	71	83.178	Drosophila_melanogaster
ENSSFOG00015007002	snrpd3l	100	96.850	ENSEASG00005000273	SNRPD3	100	96.850	Equus_asinus_asinus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSECAG00000023316	SNRPD3	100	96.850	Equus_caballus
ENSSFOG00015007002	snrpd3l	100	96.063	ENSEEUG00000015518	SNRPD3	100	96.063	Erinaceus_europaeus
ENSSFOG00015007002	snrpd3l	100	98.425	ENSELUG00000010092	snrpd3l	100	98.425	Esox_lucius
ENSSFOG00015007002	snrpd3l	100	96.850	ENSELUG00000001854	snrpd3	100	96.850	Esox_lucius
ENSSFOG00015007002	snrpd3l	100	96.850	ENSFCAG00000001512	SNRPD3	100	96.850	Felis_catus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSFALG00000007303	SNRPD3	100	96.850	Ficedula_albicollis
ENSSFOG00015007002	snrpd3l	100	96.850	ENSFDAG00000010772	SNRPD3	100	96.850	Fukomys_damarensis
ENSSFOG00015007002	snrpd3l	100	98.425	ENSFHEG00000010754	snrpd3l	100	98.425	Fundulus_heteroclitus
ENSSFOG00015007002	snrpd3l	100	96.875	ENSGMOG00000008469	snrpd3l	100	96.875	Gadus_morhua
ENSSFOG00015007002	snrpd3l	100	96.850	ENSGALG00000006596	SNRPD3	100	96.850	Gallus_gallus
ENSSFOG00015007002	snrpd3l	83	98.113	ENSGAFG00000006661	snrpd3l	82	98.113	Gambusia_affinis
ENSSFOG00015007002	snrpd3l	100	96.875	ENSGACG00000017533	snrpd3l	100	96.875	Gasterosteus_aculeatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSGAGG00000023325	SNRPD3	100	96.850	Gopherus_agassizii
ENSSFOG00015007002	snrpd3l	100	96.850	ENSGGOG00000015640	SNRPD3	100	96.850	Gorilla_gorilla
ENSSFOG00015007002	snrpd3l	100	97.638	ENSHBUG00000001332	snrpd3l	100	97.638	Haplochromis_burtoni
ENSSFOG00015007002	snrpd3l	100	96.850	ENSHGLG00000016496	SNRPD3	100	96.850	Heterocephalus_glaber_female
ENSSFOG00015007002	snrpd3l	99	93.651	ENSHGLG00000009844	-	99	89.683	Heterocephalus_glaber_female
ENSSFOG00015007002	snrpd3l	100	96.850	ENSHGLG00100019304	SNRPD3	100	96.850	Heterocephalus_glaber_male
ENSSFOG00015007002	snrpd3l	99	93.651	ENSHGLG00100011326	-	99	89.683	Heterocephalus_glaber_male
ENSSFOG00015007002	snrpd3l	100	96.850	ENSHCOG00000014396	snrpd3l	100	96.850	Hippocampus_comes
ENSSFOG00015007002	snrpd3l	100	98.438	ENSIPUG00000003083	snrpd3	100	98.438	Ictalurus_punctatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSSTOG00000025674	SNRPD3	100	96.850	Ictidomys_tridecemlineatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSJJAG00000013303	Snrpd3	100	96.850	Jaculus_jaculus
ENSSFOG00015007002	snrpd3l	100	98.425	ENSKMAG00000012493	snrpd3l	100	98.425	Kryptolebias_marmoratus
ENSSFOG00015007002	snrpd3l	100	97.638	ENSLBEG00000003202	snrpd3l	100	97.638	Labrus_bergylta
ENSSFOG00015007002	snrpd3l	100	96.063	ENSLACG00000015192	SNRPD3	100	96.063	Latimeria_chalumnae
ENSSFOG00015007002	snrpd3l	100	97.638	ENSLOCG00000006978	snrpd3	100	97.638	Lepisosteus_oculatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSLAFG00000028180	SNRPD3	100	96.850	Loxodonta_africana
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMFAG00000033628	SNRPD3	100	96.850	Macaca_fascicularis
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMMUG00000000264	SNRPD3	100	96.850	Macaca_mulatta
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMNEG00000020857	SNRPD3	100	96.850	Macaca_nemestrina
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMLEG00000037548	SNRPD3	100	96.850	Mandrillus_leucophaeus
ENSSFOG00015007002	snrpd3l	100	97.638	ENSMZEG00005017664	snrpd3l	100	97.638	Maylandia_zebra
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMAUG00000021393	Snrpd3	100	96.850	Mesocricetus_auratus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMICG00000034782	SNRPD3	100	96.850	Microcebus_murinus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMOCG00000009361	Snrpd3	100	96.850	Microtus_ochrogaster
ENSSFOG00015007002	snrpd3l	83	98.113	ENSMMOG00000020985	snrpd3l	67	98.113	Mola_mola
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMODG00000004024	SNRPD3	100	96.850	Monodelphis_domestica
ENSSFOG00015007002	snrpd3l	100	97.638	ENSMALG00000013334	snrpd3l	100	97.638	Monopterus_albus
ENSSFOG00015007002	snrpd3l	100	96.850	MGP_CAROLIEiJ_G0015441	Snrpd3	100	96.850	Mus_caroli
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMUSG00000020180	Snrpd3	100	96.850	Mus_musculus
ENSSFOG00015007002	snrpd3l	100	96.850	MGP_PahariEiJ_G0030857	Snrpd3	100	96.850	Mus_pahari
ENSSFOG00015007002	snrpd3l	100	96.850	MGP_SPRETEiJ_G0016254	Snrpd3	100	96.850	Mus_spretus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMPUG00000002889	SNRPD3	100	96.850	Mustela_putorius_furo
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMLUG00000009838	SNRPD3	100	96.850	Myotis_lucifugus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSNGAG00000010328	Snrpd3	100	96.850	Nannospalax_galili
ENSSFOG00015007002	snrpd3l	100	97.638	ENSNBRG00000020307	snrpd3l	100	97.638	Neolamprologus_brichardi
ENSSFOG00015007002	snrpd3l	100	96.850	ENSNLEG00000035757	SNRPD3	100	96.850	Nomascus_leucogenys
ENSSFOG00015007002	snrpd3l	100	96.850	ENSMEUG00000003772	SNRPD3	100	96.850	Notamacropus_eugenii
ENSSFOG00015007002	snrpd3l	100	96.850	ENSOPRG00000005763	SNRPD3	100	96.850	Ochotona_princeps
ENSSFOG00015007002	snrpd3l	100	96.063	ENSODEG00000019354	-	100	96.063	Octodon_degus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSODEG00000008064	-	100	96.850	Octodon_degus
ENSSFOG00015007002	snrpd3l	100	93.701	ENSODEG00000020162	-	100	89.764	Octodon_degus
ENSSFOG00015007002	snrpd3l	100	97.638	ENSONIG00000003828	snrpd3l	100	97.638	Oreochromis_niloticus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSOANG00000002463	SNRPD3	100	96.850	Ornithorhynchus_anatinus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSOCUG00000004845	SNRPD3	100	96.850	Oryctolagus_cuniculus
ENSSFOG00015007002	snrpd3l	100	97.638	ENSORLG00000010586	snrpd3l	100	97.638	Oryzias_latipes
ENSSFOG00015007002	snrpd3l	100	97.638	ENSORLG00020011769	snrpd3l	100	97.638	Oryzias_latipes_hni
ENSSFOG00015007002	snrpd3l	100	97.638	ENSORLG00015022940	snrpd3l	100	97.638	Oryzias_latipes_hsok
ENSSFOG00015007002	snrpd3l	100	98.425	ENSOMEG00000022734	snrpd3l	100	98.425	Oryzias_melastigma
ENSSFOG00015007002	snrpd3l	100	96.850	ENSOGAG00000012708	SNRPD3	100	96.850	Otolemur_garnettii
ENSSFOG00015007002	snrpd3l	100	96.850	ENSOARG00000013984	SNRPD3	100	96.850	Ovis_aries
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPPAG00000039191	SNRPD3	100	96.850	Pan_paniscus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPPRG00000001470	SNRPD3	100	96.850	Panthera_pardus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPTIG00000016610	SNRPD3	100	96.850	Panthera_tigris_altaica
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPTRG00000014176	SNRPD3	100	96.850	Pan_troglodytes
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPANG00000009279	SNRPD3	100	96.850	Papio_anubis
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPKIG00000006412	snrpd3l	100	96.850	Paramormyrops_kingsleyae
ENSSFOG00015007002	snrpd3l	100	95.276	ENSPSIG00000010022	-	100	95.276	Pelodiscus_sinensis
ENSSFOG00015007002	snrpd3l	98	95.968	ENSPMGG00000004486	snrpd3l	100	95.968	Periophthalmus_magnuspinnatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPCIG00000010910	SNRPD3	84	96.850	Phascolarctos_cinereus
ENSSFOG00015007002	snrpd3l	100	98.425	ENSPFOG00000019673	snrpd3l	100	98.425	Poecilia_formosa
ENSSFOG00015007002	snrpd3l	100	98.425	ENSPLAG00000023249	snrpd3l	100	98.425	Poecilia_latipinna
ENSSFOG00015007002	snrpd3l	100	98.425	ENSPMEG00000008482	snrpd3l	100	98.425	Poecilia_mexicana
ENSSFOG00015007002	snrpd3l	97	87.805	ENSPREG00000007532	snrpd3l	98	87.805	Poecilia_reticulata
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPPYG00000011648	SNRPD3	100	96.850	Pongo_abelii
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPCAG00000002065	SNRPD3	100	96.850	Procavia_capensis
ENSSFOG00015007002	snrpd3l	100	96.850	ENSPCOG00000011842	SNRPD3	100	96.850	Propithecus_coquereli
ENSSFOG00015007002	snrpd3l	100	96.063	ENSPVAG00000011405	SNRPD3	100	96.063	Pteropus_vampyrus
ENSSFOG00015007002	snrpd3l	100	97.638	ENSPNYG00000013344	snrpd3l	100	97.638	Pundamilia_nyererei
ENSSFOG00015007002	snrpd3l	100	96.094	ENSPNAG00000008683	snrpd3l	100	96.094	Pygocentrus_nattereri
ENSSFOG00015007002	snrpd3l	100	96.063	ENSPNAG00000010547	snrpd3	100	96.063	Pygocentrus_nattereri
ENSSFOG00015007002	snrpd3l	100	96.850	ENSRNOG00000050410	Snrpd3	100	96.850	Rattus_norvegicus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSRBIG00000029017	SNRPD3	100	96.850	Rhinopithecus_bieti
ENSSFOG00015007002	snrpd3l	100	96.850	ENSRROG00000031152	SNRPD3	100	96.850	Rhinopithecus_roxellana
ENSSFOG00015007002	snrpd3l	75	47.368	YLR147C	SMD3	80	50.617	Saccharomyces_cerevisiae
ENSSFOG00015007002	snrpd3l	100	97.638	ENSSMAG00000019307	snrpd3l	100	97.638	Scophthalmus_maximus
ENSSFOG00015007002	snrpd3l	100	97.638	ENSSDUG00000006870	snrpd3l	100	97.638	Seriola_dumerili
ENSSFOG00015007002	snrpd3l	100	97.638	ENSSLDG00000022664	snrpd3l	100	97.638	Seriola_lalandi_dorsalis
ENSSFOG00015007002	snrpd3l	100	96.850	ENSSARG00000002357	SNRPD3	100	96.850	Sorex_araneus
ENSSFOG00015007002	snrpd3l	100	96.063	ENSSPUG00000014285	SNRPD3	100	96.063	Sphenodon_punctatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSSSCG00000010058	SNRPD3	100	96.850	Sus_scrofa
ENSSFOG00015007002	snrpd3l	100	96.850	ENSTGUG00000010079	SNRPD3	100	96.850	Taeniopygia_guttata
ENSSFOG00015007002	snrpd3l	83	98.113	ENSTRUG00000023976	snrpd3l	90	98.113	Takifugu_rubripes
ENSSFOG00015007002	snrpd3l	100	98.425	ENSTNIG00000005323	snrpd3l	100	98.425	Tetraodon_nigroviridis
ENSSFOG00015007002	snrpd3l	100	96.850	ENSTBEG00000014334	SNRPD3	100	96.850	Tupaia_belangeri
ENSSFOG00015007002	snrpd3l	100	96.850	ENSTTRG00000006022	SNRPD3	100	96.850	Tursiops_truncatus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSUAMG00000010767	SNRPD3	100	96.850	Ursus_americanus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSUMAG00000001670	SNRPD3	100	96.850	Ursus_maritimus
ENSSFOG00015007002	snrpd3l	100	96.850	ENSVPAG00000000241	SNRPD3	100	96.850	Vicugna_pacos
ENSSFOG00015007002	snrpd3l	83	98.113	ENSVVUG00000019340	SNRPD3	53	98.113	Vulpes_vulpes
ENSSFOG00015007002	snrpd3l	100	82.576	ENSXETG00000024918	snrpd3	100	78.788	Xenopus_tropicalis
ENSSFOG00015007002	snrpd3l	100	98.425	ENSXCOG00000004795	snrpd3l	100	98.425	Xiphophorus_couchianus
ENSSFOG00015007002	snrpd3l	100	98.425	ENSXMAG00000001133	snrpd3l	100	98.425	Xiphophorus_maculatus