EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015007013 (Gene tree)
Gene ID: 108922553
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1B-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 14901 bases
Position: chrKV410816.1:1729555-1744455
Accession: 108922553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010886	RRM_1	PF00076.22	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015011033	-	6822	XM_018732753	ENSSFOP00015010886	2273 (aa)	XP_018588269	-

Gene Model

Click here to download ENSSFOG00015007013's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007013	setd1a	53	95.556	ENSACIG00000007144	setd1a	90	81.290	Amphilophus_citrinellus
ENSSFOG00015007013	setd1a	51	82.000	ENSCAPG00000006491	-	50	81.169	Cavia_aperea
ENSSFOG00015007013	setd1a	70	70.488	ENSELUG00000020261	setd1a	60	70.133	Esox_lucius
ENSSFOG00015007013	setd1a	71	71.233	ENSFHEG00000023258	setd1a	88	97.561	Fundulus_heteroclitus
ENSSFOG00015007013	setd1a	58	79.688	ENSGAFG00000011698	setd1a	76	81.529	Gambusia_affinis
ENSSFOG00015007013	setd1a	63	74.114	ENSGACG00000013688	setd1a	69	76.791	Gasterosteus_aculeatus
ENSSFOG00015007013	setd1a	53	83.172	ENSGAGG00000010781	-	54	83.172	Gopherus_agassizii
ENSSFOG00015007013	setd1a	51	80.333	ENSHGLG00000014238	-	54	79.739	Heterocephalus_glaber_female
ENSSFOG00015007013	setd1a	53	75.424	ENSHCOG00000003119	setd1a	88	79.394	Hippocampus_comes
ENSSFOG00015007013	setd1a	52	80.602	ENSMNEG00000032572	-	53	79.545	Macaca_nemestrina
ENSSFOG00015007013	setd1a	54	78.210	ENSMAMG00000021851	setd1a	79	78.210	Mastacembelus_armatus
ENSSFOG00015007013	setd1a	50	81.333	ENSMAUG00000008959	-	51	80.519	Mesocricetus_auratus
ENSSFOG00015007013	setd1a	64	100.000	ENSMMOG00000016992	setd1a	96	80.480	Mola_mola
ENSSFOG00015007013	setd1a	58	55.259	ENSMALG00000007401	setd1a	57	54.370	Monopterus_albus
ENSSFOG00015007013	setd1a	51	81.333	MGP_CAROLIEiJ_G0030519	-	100	71.066	Mus_caroli
ENSSFOG00015007013	setd1a	51	81.333	ENSMUSG00000042308	Setd1a	100	71.066	Mus_musculus
ENSSFOG00015007013	setd1a	51	81.333	MGP_SPRETEiJ_G0031633	Setd1a	100	70.558	Mus_spretus
ENSSFOG00015007013	setd1a	52	80.602	ENSNLEG00000016072	-	53	79.545	Nomascus_leucogenys
ENSSFOG00015007013	setd1a	59	55.885	ENSPFOG00000013669	setd1a	58	54.922	Poecilia_formosa
ENSSFOG00015007013	setd1a	52	80.066	ENSRBIG00000033047	-	55	80.066	Rhinopithecus_bieti
ENSSFOG00015007013	setd1a	79	65.567	ENSTRUG00000008953	setd1a	90	65.256	Takifugu_rubripes
ENSSFOG00015007013	setd1a	68	91.111	ENSTNIG00000014930	setd1a	78	72.775	Tetraodon_nigroviridis
ENSSFOG00015007013	setd1a	58	67.051	ENSXCOG00000017585	setd1a	59	67.273	Xiphophorus_couchianus