EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015007053 (Gene tree)
Gene ID: 108930958
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 6234 bases
Position: chrKV410945.1:365822-372055
Accession: 108930958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010902	Pept_tRNA_hydro	PF01195.19	6.5e-44	1	1
ENSSFOP00015010893	Pept_tRNA_hydro	PF01195.19	2.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015011040	-	612	-	ENSSFOP00015010893	203 (aa)	-	-
ENSSFOT00015011049	-	1842	XM_018746465	ENSSFOP00015010902	307 (aa)	XP_018601981	A0A1W4ZN83

Gene Model

Click here to download ENSSFOG00015007053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007053	ptrh1	96	57.732	ENSG00000187024	PTRH1	87	57.732	Homo_sapiens
ENSSFOG00015007053	ptrh1	90	68.681	ENSAPOG00000010719	ptrh1	74	63.636	Acanthochromis_polyacanthus
ENSSFOG00015007053	ptrh1	90	68.681	ENSAPOG00000000947	PTRH1	74	63.636	Acanthochromis_polyacanthus
ENSSFOG00015007053	ptrh1	90	68.681	ENSAPOG00000003014	-	74	63.636	Acanthochromis_polyacanthus
ENSSFOG00015007053	ptrh1	93	52.128	ENSAMEG00000016791	PTRH1	86	52.128	Ailuropoda_melanoleuca
ENSSFOG00015007053	ptrh1	84	72.515	ENSACIG00000006734	ptrh1	76	72.316	Amphilophus_citrinellus
ENSSFOG00015007053	ptrh1	92	65.591	ENSAOCG00000009725	ptrh1	84	58.403	Amphiprion_ocellaris
ENSSFOG00015007053	ptrh1	92	65.591	ENSAPEG00000020993	ptrh1	84	58.403	Amphiprion_percula
ENSSFOG00015007053	ptrh1	84	71.176	ENSATEG00000010003	ptrh1	73	65.686	Anabas_testudineus
ENSSFOG00015007053	ptrh1	96	58.247	ENSANAG00000025547	PTRH1	87	58.247	Aotus_nancymaae
ENSSFOG00015007053	ptrh1	87	67.797	ENSACLG00000025462	ptrh1	81	64.078	Astatotilapia_calliptera
ENSSFOG00015007053	ptrh1	86	68.966	ENSAMXG00000034117	ptrh1	73	66.837	Astyanax_mexicanus
ENSSFOG00015007053	ptrh1	90	59.341	ENSCJAG00000019841	PTRH1	64	63.793	Callithrix_jacchus
ENSSFOG00015007053	ptrh1	93	55.556	ENSCAFG00000020123	PTRH1	85	55.556	Canis_familiaris
ENSSFOG00015007053	ptrh1	93	55.851	ENSCAFG00020015776	PTRH1	82	55.851	Canis_lupus_dingo
ENSSFOG00015007053	ptrh1	93	59.043	ENSCHIG00000008188	PTRH1	85	59.043	Capra_hircus
ENSSFOG00015007053	ptrh1	66	61.654	ENSCAPG00000015926	PTRH1	96	61.654	Cavia_aperea
ENSSFOG00015007053	ptrh1	90	59.890	ENSCPOG00000023968	PTRH1	85	59.890	Cavia_porcellus
ENSSFOG00015007053	ptrh1	96	57.732	ENSCCAG00000023134	PTRH1	87	57.732	Cebus_capucinus
ENSSFOG00015007053	ptrh1	96	57.216	ENSCATG00000042852	PTRH1	87	57.216	Cercocebus_atys
ENSSFOG00015007053	ptrh1	93	57.979	ENSCLAG00000011155	PTRH1	88	56.915	Chinchilla_lanigera
ENSSFOG00015007053	ptrh1	96	57.216	ENSCSAG00000013748	PTRH1	82	57.216	Chlorocebus_sabaeus
ENSSFOG00015007053	ptrh1	75	50.980	ENSCPBG00000025207	PTRH1	88	50.000	Chrysemys_picta_bellii
ENSSFOG00015007053	ptrh1	96	57.216	ENSCANG00000039856	PTRH1	87	57.216	Colobus_angolensis_palliatus
ENSSFOG00015007053	ptrh1	93	58.511	ENSCGRG00001013108	Ptrh1	89	58.511	Cricetulus_griseus_chok1gshd
ENSSFOG00015007053	ptrh1	87	61.364	ENSCGRG00000016553	Ptrh1	97	61.364	Cricetulus_griseus_crigri
ENSSFOG00015007053	ptrh1	83	65.680	ENSCSEG00000010332	ptrh1	89	51.953	Cynoglossus_semilaevis
ENSSFOG00015007053	ptrh1	81	68.902	ENSCVAG00000010701	ptrh1	77	62.019	Cyprinodon_variegatus
ENSSFOG00015007053	ptrh1	54	69.725	ENSCVAG00000003873	-	80	69.725	Cyprinodon_variegatus
ENSSFOG00015007053	ptrh1	89	66.111	ENSDARG00000098206	ptrh1	84	64.433	Danio_rerio
ENSSFOG00015007053	ptrh1	96	55.670	ENSDNOG00000024194	PTRH1	87	55.670	Dasypus_novemcinctus
ENSSFOG00015007053	ptrh1	89	58.564	ENSDORG00000013321	Ptrh1	84	58.564	Dipodomys_ordii
ENSSFOG00015007053	ptrh1	90	59.890	ENSEASG00005020466	PTRH1	81	61.494	Equus_asinus_asinus
ENSSFOG00015007053	ptrh1	84	62.941	ENSECAG00000007615	PTRH1	63	62.941	Equus_caballus
ENSSFOG00015007053	ptrh1	84	72.353	ENSELUG00000015467	ptrh1	84	58.537	Esox_lucius
ENSSFOG00015007053	ptrh1	93	54.787	ENSFCAG00000001483	PTRH1	91	54.124	Felis_catus
ENSSFOG00015007053	ptrh1	90	49.462	ENSFALG00000001352	PTRH1	89	49.462	Ficedula_albicollis
ENSSFOG00015007053	ptrh1	93	56.915	ENSFDAG00000020077	PTRH1	89	56.915	Fukomys_damarensis
ENSSFOG00015007053	ptrh1	84	71.765	ENSFHEG00000010590	ptrh1	80	63.333	Fundulus_heteroclitus
ENSSFOG00015007053	ptrh1	55	57.143	ENSGMOG00000009801	PTRH1	80	58.929	Gadus_morhua
ENSSFOG00015007053	ptrh1	84	69.412	ENSGAFG00000016215	ptrh1	75	68.539	Gambusia_affinis
ENSSFOG00015007053	ptrh1	81	70.732	ENSGACG00000014682	ptrh1	88	69.643	Gasterosteus_aculeatus
ENSSFOG00015007053	ptrh1	86	52.874	ENSGAGG00000022860	PTRH1	93	46.491	Gopherus_agassizii
ENSSFOG00015007053	ptrh1	96	57.216	ENSGGOG00000011033	PTRH1	87	57.216	Gorilla_gorilla
ENSSFOG00015007053	ptrh1	81	70.122	ENSHBUG00000020824	ptrh1	74	64.078	Haplochromis_burtoni
ENSSFOG00015007053	ptrh1	93	56.915	ENSHGLG00000019147	PTRH1	93	57.895	Heterocephalus_glaber_female
ENSSFOG00015007053	ptrh1	93	54.255	ENSHGLG00100003681	PTRH1	91	54.255	Heterocephalus_glaber_male
ENSSFOG00015007053	ptrh1	87	63.842	ENSHCOG00000014772	ptrh1	73	63.542	Hippocampus_comes
ENSSFOG00015007053	ptrh1	87	67.614	ENSIPUG00000015364	ptrh1	81	61.836	Ictalurus_punctatus
ENSSFOG00015007053	ptrh1	83	58.333	ENSSTOG00000008942	PTRH1	85	56.383	Ictidomys_tridecemlineatus
ENSSFOG00015007053	ptrh1	93	57.447	ENSJJAG00000014338	Ptrh1	88	57.447	Jaculus_jaculus
ENSSFOG00015007053	ptrh1	84	71.765	ENSKMAG00000003253	ptrh1	75	64.423	Kryptolebias_marmoratus
ENSSFOG00015007053	ptrh1	63	71.654	ENSLBEG00000028842	ptrh1	76	71.654	Labrus_bergylta
ENSSFOG00015007053	ptrh1	83	66.071	ENSLACG00000016741	PTRH1	73	63.842	Latimeria_chalumnae
ENSSFOG00015007053	ptrh1	93	53.723	ENSLAFG00000021934	PTRH1	89	53.723	Loxodonta_africana
ENSSFOG00015007053	ptrh1	96	57.216	ENSMFAG00000001700	PTRH1	87	57.216	Macaca_fascicularis
ENSSFOG00015007053	ptrh1	96	57.216	ENSMMUG00000016424	PTRH1	87	57.216	Macaca_mulatta
ENSSFOG00015007053	ptrh1	96	57.216	ENSMNEG00000033061	PTRH1	82	57.216	Macaca_nemestrina
ENSSFOG00015007053	ptrh1	52	54.717	ENSMLEG00000042412	-	98	54.717	Mandrillus_leucophaeus
ENSSFOG00015007053	ptrh1	81	68.902	ENSMAMG00000017386	ptrh1	88	54.231	Mastacembelus_armatus
ENSSFOG00015007053	ptrh1	87	67.797	ENSMZEG00005020001	ptrh1	81	64.078	Maylandia_zebra
ENSSFOG00015007053	ptrh1	90	59.890	ENSMAUG00000006266	Ptrh1	89	59.890	Mesocricetus_auratus
ENSSFOG00015007053	ptrh1	93	56.915	ENSMICG00000005611	PTRH1	84	56.915	Microcebus_murinus
ENSSFOG00015007053	ptrh1	93	57.447	ENSMOCG00000013992	Ptrh1	89	57.447	Microtus_ochrogaster
ENSSFOG00015007053	ptrh1	88	67.039	ENSMMOG00000014747	ptrh1	75	63.084	Mola_mola
ENSSFOG00015007053	ptrh1	94	50.259	ENSMODG00000005503	PTRH1	85	50.259	Monodelphis_domestica
ENSSFOG00015007053	ptrh1	62	67.200	ENSMALG00000005392	ptrh1	74	68.254	Monopterus_albus
ENSSFOG00015007053	ptrh1	92	57.653	MGP_CAROLIEiJ_G0023450	Ptrh1	96	57.653	Mus_caroli
ENSSFOG00015007053	ptrh1	92	57.653	ENSMUSG00000053746	Ptrh1	96	57.653	Mus_musculus
ENSSFOG00015007053	ptrh1	92	57.653	MGP_PahariEiJ_G0024907	Ptrh1	96	57.653	Mus_pahari
ENSSFOG00015007053	ptrh1	92	57.653	MGP_SPRETEiJ_G0024367	Ptrh1	96	57.653	Mus_spretus
ENSSFOG00015007053	ptrh1	93	55.263	ENSMPUG00000013790	PTRH1	85	55.263	Mustela_putorius_furo
ENSSFOG00015007053	ptrh1	93	53.769	ENSMLUG00000013454	PTRH1	87	53.769	Myotis_lucifugus
ENSSFOG00015007053	ptrh1	93	55.851	ENSNGAG00000014008	Ptrh1	90	55.738	Nannospalax_galili
ENSSFOG00015007053	ptrh1	87	67.797	ENSNBRG00000015590	ptrh1	74	64.563	Neolamprologus_brichardi
ENSSFOG00015007053	ptrh1	96	56.701	ENSNLEG00000017468	PTRH1	87	56.701	Nomascus_leucogenys
ENSSFOG00015007053	ptrh1	93	56.915	ENSODEG00000004012	PTRH1	87	56.284	Octodon_degus
ENSSFOG00015007053	ptrh1	87	67.232	ENSONIG00000013912	ptrh1	82	62.911	Oreochromis_niloticus
ENSSFOG00015007053	ptrh1	84	52.941	ENSOANG00000011891	PTRH1	90	46.083	Ornithorhynchus_anatinus
ENSSFOG00015007053	ptrh1	93	57.447	ENSOCUG00000006894	PTRH1	78	57.447	Oryctolagus_cuniculus
ENSSFOG00015007053	ptrh1	93	58.511	ENSOGAG00000008094	PTRH1	87	58.511	Otolemur_garnettii
ENSSFOG00015007053	ptrh1	93	51.759	ENSOARG00000011808	PTRH1	86	51.759	Ovis_aries
ENSSFOG00015007053	ptrh1	96	57.732	ENSPPAG00000041782	PTRH1	87	57.732	Pan_paniscus
ENSSFOG00015007053	ptrh1	93	55.319	ENSPPRG00000007889	PTRH1	91	54.639	Panthera_pardus
ENSSFOG00015007053	ptrh1	59	57.500	ENSPTIG00000021082	-	94	57.500	Panthera_tigris_altaica
ENSSFOG00015007053	ptrh1	96	57.732	ENSPTRG00000021394	PTRH1	87	57.732	Pan_troglodytes
ENSSFOG00015007053	ptrh1	96	51.269	ENSPANG00000031755	PTRH1	87	51.269	Papio_anubis
ENSSFOG00015007053	ptrh1	84	78.824	ENSPKIG00000005449	ptrh1	90	63.669	Paramormyrops_kingsleyae
ENSSFOG00015007053	ptrh1	84	51.176	ENSPSIG00000013828	PTRH1	65	49.438	Pelodiscus_sinensis
ENSSFOG00015007053	ptrh1	84	57.558	ENSPMGG00000002148	ptrh1	74	55.288	Periophthalmus_magnuspinnatus
ENSSFOG00015007053	ptrh1	83	59.763	ENSPEMG00000014360	Ptrh1	89	58.511	Peromyscus_maniculatus_bairdii
ENSSFOG00015007053	ptrh1	84	70.588	ENSPFOG00000003715	ptrh1	78	63.942	Poecilia_formosa
ENSSFOG00015007053	ptrh1	86	68.966	ENSPLAG00000023354	ptrh1	72	69.274	Poecilia_latipinna
ENSSFOG00015007053	ptrh1	84	70.588	ENSPMEG00000000447	ptrh1	78	63.942	Poecilia_mexicana
ENSSFOG00015007053	ptrh1	84	69.412	ENSPREG00000012612	ptrh1	78	62.981	Poecilia_reticulata
ENSSFOG00015007053	ptrh1	96	54.124	ENSPPYG00000019628	PTRH1	81	54.124	Pongo_abelii
ENSSFOG00015007053	ptrh1	93	56.915	ENSPCAG00000007016	PTRH1	84	56.915	Procavia_capensis
ENSSFOG00015007053	ptrh1	93	56.915	ENSPCOG00000014541	PTRH1	84	56.915	Propithecus_coquereli
ENSSFOG00015007053	ptrh1	93	57.979	ENSPVAG00000000954	PTRH1	85	57.979	Pteropus_vampyrus
ENSSFOG00015007053	ptrh1	87	66.667	ENSPNYG00000007789	ptrh1	74	63.592	Pundamilia_nyererei
ENSSFOG00015007053	ptrh1	84	72.353	ENSPNAG00000029930	ptrh1	79	64.151	Pygocentrus_nattereri
ENSSFOG00015007053	ptrh1	92	58.163	ENSRNOG00000049034	Ptrh1	96	58.163	Rattus_norvegicus
ENSSFOG00015007053	ptrh1	96	57.216	ENSRBIG00000027290	PTRH1	87	57.216	Rhinopithecus_bieti
ENSSFOG00015007053	ptrh1	96	57.216	ENSRROG00000028799	PTRH1	82	57.216	Rhinopithecus_roxellana
ENSSFOG00015007053	ptrh1	84	33.880	YHR189W	PTH1	100	32.124	Saccharomyces_cerevisiae
ENSSFOG00015007053	ptrh1	96	58.247	ENSSBOG00000026699	PTRH1	82	58.247	Saimiri_boliviensis_boliviensis
ENSSFOG00015007053	ptrh1	90	52.406	ENSSHAG00000018238	PTRH1	98	49.254	Sarcophilus_harrisii
ENSSFOG00015007053	ptrh1	84	67.251	ENSSMAG00000016747	ptrh1	75	67.045	Scophthalmus_maximus
ENSSFOG00015007053	ptrh1	81	68.902	ENSSDUG00000013471	ptrh1	90	66.667	Seriola_dumerili
ENSSFOG00015007053	ptrh1	82	67.857	ENSSLDG00000024662	ptrh1	89	59.276	Seriola_lalandi_dorsalis
ENSSFOG00015007053	ptrh1	86	52.299	ENSSPUG00000000040	PTRH1	80	50.549	Sphenodon_punctatus
ENSSFOG00015007053	ptrh1	88	67.598	ENSSPAG00000003298	ptrh1	89	68.927	Stegastes_partitus
ENSSFOG00015007053	ptrh1	96	56.701	ENSSSCG00000005615	PTRH1	87	56.701	Sus_scrofa
ENSSFOG00015007053	ptrh1	66	57.463	ENSTGUG00000003648	PTRH1	100	57.463	Taeniopygia_guttata
ENSSFOG00015007053	ptrh1	81	70.732	ENSTRUG00000019801	PTRH1	76	63.285	Takifugu_rubripes
ENSSFOG00015007053	ptrh1	84	71.176	ENSTNIG00000016735	ptrh1	88	66.834	Tetraodon_nigroviridis
ENSSFOG00015007053	ptrh1	89	54.444	ENSTTRG00000016458	PTRH1	84	54.444	Tursiops_truncatus
ENSSFOG00015007053	ptrh1	93	55.319	ENSUAMG00000023948	-	86	54.450	Ursus_americanus
ENSSFOG00015007053	ptrh1	90	48.352	ENSVPAG00000001805	PTRH1	100	48.352	Vicugna_pacos
ENSSFOG00015007053	ptrh1	93	55.851	ENSVVUG00000013198	PTRH1	82	55.851	Vulpes_vulpes
ENSSFOG00015007053	ptrh1	84	57.647	ENSXETG00000009980	ptrh1	93	56.322	Xenopus_tropicalis
ENSSFOG00015007053	ptrh1	88	65.556	ENSXCOG00000011498	ptrh1	78	66.304	Xiphophorus_couchianus
ENSSFOG00015007053	ptrh1	84	68.824	ENSXMAG00000009256	ptrh1	78	62.019	Xiphophorus_maculatus