EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015007074 (Gene tree)
Gene ID: 108934436
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6149 bases
Position: chrKV411071.1:11177986-11184134
Accession: 108934436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015010908	Nucleoplasmin	PF03066.15	3.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015011055	-	3342	XM_018752268	ENSSFOP00015010908	284 (aa)	XP_018607784	-

Gene Model

Click here to download ENSSFOG00015007074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015007074	npm1a	54	38.217	ENSSFOG00015010466	npm2b	61	41.121
ENSSFOG00015007074	npm1a	98	39.796	ENSSFOG00015005064	npm1b	99	41.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007074	npm1a	100	62.500	ENSAPOG00000002813	npm1a	100	62.829	Acanthochromis_polyacanthus
ENSSFOG00015007074	npm1a	94	63.082	ENSACIG00000014201	npm1a	100	63.929	Amphilophus_citrinellus
ENSSFOG00015007074	npm1a	88	64.683	ENSAOCG00000004978	npm1a	100	63.095	Amphiprion_ocellaris
ENSSFOG00015007074	npm1a	100	63.158	ENSAPEG00000008594	npm1a	100	62.171	Amphiprion_percula
ENSSFOG00015007074	npm1a	100	62.939	ENSATEG00000008885	npm1a	99	63.430	Anabas_testudineus
ENSSFOG00015007074	npm1a	96	60.650	ENSACLG00000008376	npm1a	96	61.011	Astatotilapia_calliptera
ENSSFOG00015007074	npm1a	98	56.997	ENSAMXG00000010155	npm1a	99	59.044	Astyanax_mexicanus
ENSSFOG00015007074	npm1a	100	53.846	ENSCSEG00000011165	npm1a	100	54.196	Cynoglossus_semilaevis
ENSSFOG00015007074	npm1a	100	61.258	ENSCVAG00000008960	npm1a	100	61.921	Cyprinodon_variegatus
ENSSFOG00015007074	npm1a	98	62.937	ENSDARG00000014329	npm1a	94	74.342	Danio_rerio
ENSSFOG00015007074	npm1a	100	64.189	ENSELUG00000013705	npm1a	100	64.865	Esox_lucius
ENSSFOG00015007074	npm1a	100	58.497	ENSFHEG00000012496	npm1a	100	59.804	Fundulus_heteroclitus
ENSSFOG00015007074	npm1a	100	55.410	ENSGAFG00000013059	npm1a	100	55.738	Gambusia_affinis
ENSSFOG00015007074	npm1a	99	57.483	ENSGACG00000020319	npm1a	99	57.483	Gasterosteus_aculeatus
ENSSFOG00015007074	npm1a	99	57.812	ENSHBUG00000000776	npm1a	100	57.812	Haplochromis_burtoni
ENSSFOG00015007074	npm1a	99	51.667	ENSHCOG00000001059	npm1a	97	51.546	Hippocampus_comes
ENSSFOG00015007074	npm1a	97	61.824	ENSIPUG00000019452	npm1	99	62.162	Ictalurus_punctatus
ENSSFOG00015007074	npm1a	100	60.403	ENSKMAG00000010709	npm1a	100	60.067	Kryptolebias_marmoratus
ENSSFOG00015007074	npm1a	100	59.076	ENSLBEG00000008793	npm1a	100	59.736	Labrus_bergylta
ENSSFOG00015007074	npm1a	85	59.559	ENSLOCG00000009683	npm1a	100	60.294	Lepisosteus_oculatus
ENSSFOG00015007074	npm1a	100	63.000	ENSMAMG00000009344	npm1a	83	62.000	Mastacembelus_armatus
ENSSFOG00015007074	npm1a	99	59.434	ENSMZEG00005013717	npm1a	100	58.805	Maylandia_zebra
ENSSFOG00015007074	npm1a	94	63.958	ENSMMOG00000007980	npm1a	100	64.311	Mola_mola
ENSSFOG00015007074	npm1a	100	58.170	ENSMALG00000001146	npm1a	100	59.477	Monopterus_albus
ENSSFOG00015007074	npm1a	99	56.698	ENSNBRG00000013172	npm1a	98	56.825	Neolamprologus_brichardi
ENSSFOG00015007074	npm1a	99	61.056	ENSONIG00000001860	npm1a	98	61.056	Oreochromis_niloticus
ENSSFOG00015007074	npm1a	100	61.616	ENSORLG00000010179	npm1a	100	61.616	Oryzias_latipes
ENSSFOG00015007074	npm1a	100	61.486	ENSORLG00020020817	npm1a	100	61.486	Oryzias_latipes_hni
ENSSFOG00015007074	npm1a	100	61.616	ENSORLG00015003439	npm1a	100	61.616	Oryzias_latipes_hsok
ENSSFOG00015007074	npm1a	100	59.060	ENSOMEG00000007083	npm1a	100	59.060	Oryzias_melastigma
ENSSFOG00015007074	npm1a	100	65.563	ENSPKIG00000023943	npm1a	100	65.563	Paramormyrops_kingsleyae
ENSSFOG00015007074	npm1a	100	49.123	ENSPMGG00000011716	npm1a	100	49.123	Periophthalmus_magnuspinnatus
ENSSFOG00015007074	npm1a	100	57.895	ENSPFOG00000019173	npm1a	100	58.224	Poecilia_formosa
ENSSFOG00015007074	npm1a	100	59.136	ENSPLAG00000001093	npm1a	100	59.736	Poecilia_latipinna
ENSSFOG00015007074	npm1a	100	57.895	ENSPMEG00000012523	npm1a	100	58.224	Poecilia_mexicana
ENSSFOG00015007074	npm1a	100	56.908	ENSPREG00000001647	npm1a	100	56.908	Poecilia_reticulata
ENSSFOG00015007074	npm1a	99	58.730	ENSPNYG00000019321	npm1a	100	58.413	Pundamilia_nyererei
ENSSFOG00015007074	npm1a	98	60.339	ENSPNAG00000026891	npm1a	99	61.486	Pygocentrus_nattereri
ENSSFOG00015007074	npm1a	100	62.081	ENSSMAG00000019090	npm1a	100	64.430	Scophthalmus_maximus
ENSSFOG00015007074	npm1a	100	60.927	ENSSDUG00000015609	npm1a	100	61.258	Seriola_dumerili
ENSSFOG00015007074	npm1a	100	61.130	ENSSLDG00000017849	npm1a	100	61.462	Seriola_lalandi_dorsalis
ENSSFOG00015007074	npm1a	100	58.392	ENSSPAG00000021660	npm1a	100	56.993	Stegastes_partitus
ENSSFOG00015007074	npm1a	100	60.586	ENSTRUG00000024003	npm1a	100	60.586	Takifugu_rubripes
ENSSFOG00015007074	npm1a	100	62.162	ENSTNIG00000010773	npm1a	100	63.176	Tetraodon_nigroviridis
ENSSFOG00015007074	npm1a	99	56.446	ENSXCOG00000005958	npm1a	100	58.156	Xiphophorus_couchianus
ENSSFOG00015007074	npm1a	100	57.468	ENSXMAG00000000396	npm1a	100	57.468	Xiphophorus_maculatus