EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015007093 (Gene tree)
Gene ID: 108919594
Gene Symbol: rbm25
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA binding motif protein 25
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12808 bases
Position: chrKV411272.1:594611-607418
Accession: 108919594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015011001	RRM_1	PF00076.22	5.7e-09	1	1
ENSSFOP00015011022	RRM_1	PF00076.22	5.7e-09	1	1
ENSSFOP00015011042	PWI	PF01480.17	1e-13	1	1
ENSSFOP00015011001	PWI	PF01480.17	1e-13	1	1
ENSSFOP00015011022	PWI	PF01480.17	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015011190	-	2433	-	ENSSFOP00015011042	810 (aa)	-	-
ENSSFOT00015011149	-	4446	XM_018727689	ENSSFOP00015011001	823 (aa)	XP_018583205	A0A1W4Y4M6
ENSSFOT00015011169	-	4380	XM_018727688	ENSSFOP00015011022	823 (aa)	XP_018583204	A0A1W4Y4M6

Gene Model

Click here to download ENSSFOG00015007093's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007093	rbm25	57	77.778	ENSAPOG00000015321	rbm25b	58	78.632	Acanthochromis_polyacanthus
ENSSFOG00015007093	rbm25	58	79.158	ENSAPOG00000017757	rbm25a	57	79.070	Acanthochromis_polyacanthus
ENSSFOG00015007093	rbm25	58	78.542	ENSACIG00000019482	rbm25a	56	78.224	Amphilophus_citrinellus
ENSSFOG00015007093	rbm25	58	78.511	ENSAOCG00000013695	rbm25a	55	77.468	Amphiprion_ocellaris
ENSSFOG00015007093	rbm25	58	69.478	ENSAOCG00000019308	rbm25b	56	73.504	Amphiprion_ocellaris
ENSSFOG00015007093	rbm25	58	74.174	ENSAPEG00000009666	rbm25b	60	76.282	Amphiprion_percula
ENSSFOG00015007093	rbm25	100	77.858	ENSAPEG00000007514	rbm25a	57	78.647	Amphiprion_percula
ENSSFOG00015007093	rbm25	58	76.533	ENSATEG00000017312	rbm25b	59	75.000	Anabas_testudineus
ENSSFOG00015007093	rbm25	57	79.237	ENSATEG00000020676	rbm25a	63	77.688	Anabas_testudineus
ENSSFOG00015007093	rbm25	89	79.783	ENSACLG00000027482	rbm25a	83	78.670	Astatotilapia_calliptera
ENSSFOG00015007093	rbm25	57	76.008	ENSACLG00000024359	rbm25b	57	76.596	Astatotilapia_calliptera
ENSSFOG00015007093	rbm25	100	77.229	ENSAMXG00000024525	rbm25b	52	77.830	Astyanax_mexicanus
ENSSFOG00015007093	rbm25	55	34.375	WBGene00012245	W04D2.6	78	32.420	Caenorhabditis_elegans
ENSSFOG00015007093	rbm25	51	82.065	ENSCAPG00000005239	RBM25	57	82.967	Cavia_aperea
ENSSFOG00015007093	rbm25	64	88.000	ENSCHOG00000008903	RBM25	63	88.000	Choloepus_hoffmanni
ENSSFOG00015007093	rbm25	63	71.940	ENSCGRG00001020817	Rbm25	100	68.192	Cricetulus_griseus_chok1gshd
ENSSFOG00015007093	rbm25	56	74.946	ENSCSEG00000009430	rbm25a	54	75.792	Cynoglossus_semilaevis
ENSSFOG00015007093	rbm25	58	75.738	ENSCSEG00000020737	rbm25b	58	75.480	Cynoglossus_semilaevis
ENSSFOG00015007093	rbm25	58	70.793	ENSCVAG00000005498	rbm25a	99	74.235	Cyprinodon_variegatus
ENSSFOG00015007093	rbm25	63	81.905	ENSDARG00000006395	rbm25b	53	76.233	Danio_rerio
ENSSFOG00015007093	rbm25	54	68.650	ENSDARG00000039266	rbm25a	99	97.468	Danio_rerio
ENSSFOG00015007093	rbm25	86	72.414	FBgn0028474	CG4119	51	61.972	Drosophila_melanogaster
ENSSFOG00015007093	rbm25	72	39.159	ENSEBUG00000002963	rbm25b	62	40.515	Eptatretus_burgeri
ENSSFOG00015007093	rbm25	58	76.605	ENSELUG00000007730	rbm25b	58	77.131	Esox_lucius
ENSSFOG00015007093	rbm25	58	73.457	ENSFHEG00000003513	rbm25b	58	73.830	Fundulus_heteroclitus
ENSSFOG00015007093	rbm25	84	73.246	ENSGMOG00000014097	rbm25b	63	74.561	Gadus_morhua
ENSSFOG00015007093	rbm25	80	76.596	ENSGMOG00000014070	rbm25a	85	77.778	Gadus_morhua
ENSSFOG00015007093	rbm25	100	76.812	ENSGAFG00000018036	rbm25a	82	78.022	Gambusia_affinis
ENSSFOG00015007093	rbm25	99	70.671	ENSGAFG00000001092	rbm25b	51	74.316	Gambusia_affinis
ENSSFOG00015007093	rbm25	57	75.796	ENSHBUG00000018499	rbm25b	57	76.383	Haplochromis_burtoni
ENSSFOG00015007093	rbm25	56	81.360	ENSHBUG00000016908	rbm25a	57	79.661	Haplochromis_burtoni
ENSSFOG00015007093	rbm25	100	67.976	ENSHCOG00000000142	rbm25b	57	71.175	Hippocampus_comes
ENSSFOG00015007093	rbm25	95	74.185	ENSKMAG00000016242	rbm25a	54	74.083	Kryptolebias_marmoratus
ENSSFOG00015007093	rbm25	57	75.269	ENSKMAG00000018826	rbm25b	57	75.319	Kryptolebias_marmoratus
ENSSFOG00015007093	rbm25	100	73.761	ENSLBEG00000010667	rbm25b	58	75.372	Labrus_bergylta
ENSSFOG00015007093	rbm25	100	78.872	ENSLACG00000011845	RBM25	54	78.270	Latimeria_chalumnae
ENSSFOG00015007093	rbm25	58	74.844	ENSMAMG00000004524	rbm25b	57	76.681	Mastacembelus_armatus
ENSSFOG00015007093	rbm25	53	75.870	ENSMAMG00000000165	rbm25a	51	76.359	Mastacembelus_armatus
ENSSFOG00015007093	rbm25	57	76.008	ENSMZEG00005001453	rbm25b	57	76.596	Maylandia_zebra
ENSSFOG00015007093	rbm25	56	81.360	ENSMZEG00005011183	rbm25a	57	79.661	Maylandia_zebra
ENSSFOG00015007093	rbm25	57	77.468	ENSMMOG00000009065	rbm25a	56	76.824	Mola_mola
ENSSFOG00015007093	rbm25	58	75.260	ENSMALG00000020441	rbm25b	89	77.119	Monopterus_albus
ENSSFOG00015007093	rbm25	56	81.579	ENSNBRG00000003761	rbm25a	57	80.342	Neolamprologus_brichardi
ENSSFOG00015007093	rbm25	100	68.864	ENSOCUG00000013737	RBM25	85	77.802	Oryctolagus_cuniculus
ENSSFOG00015007093	rbm25	58	74.105	ENSORLG00000011874	rbm25b	57	74.098	Oryzias_latipes
ENSSFOG00015007093	rbm25	58	74.316	ENSORLG00020016422	rbm25b	57	74.310	Oryzias_latipes_hni
ENSSFOG00015007093	rbm25	58	74.316	ENSORLG00015011269	rbm25b	57	74.310	Oryzias_latipes_hsok
ENSSFOG00015007093	rbm25	53	75.000	ENSOMEG00000022138	rbm25a	58	73.770	Oryzias_melastigma
ENSSFOG00015007093	rbm25	58	74.526	ENSOMEG00000023172	rbm25b	57	74.947	Oryzias_melastigma
ENSSFOG00015007093	rbm25	100	92.840	ENSPKIG00000003203	rbm25b	100	92.354	Paramormyrops_kingsleyae
ENSSFOG00015007093	rbm25	57	77.871	ENSPMGG00000015740	rbm25b	58	77.801	Periophthalmus_magnuspinnatus
ENSSFOG00015007093	rbm25	53	65.268	ENSPMGG00000001791	rbm25a	99	64.828	Periophthalmus_magnuspinnatus
ENSSFOG00015007093	rbm25	65	78.439	ENSPFOG00000017931	rbm25a	60	83.468	Poecilia_formosa
ENSSFOG00015007093	rbm25	58	73.444	ENSPFOG00000018808	rbm25b	57	74.473	Poecilia_formosa
ENSSFOG00015007093	rbm25	100	76.634	ENSPLAG00000018338	rbm25a	60	83.468	Poecilia_latipinna
ENSSFOG00015007093	rbm25	58	73.237	ENSPMEG00000019161	rbm25b	57	74.262	Poecilia_mexicana
ENSSFOG00015007093	rbm25	100	76.755	ENSPMEG00000024470	rbm25a	60	83.468	Poecilia_mexicana
ENSSFOG00015007093	rbm25	58	72.107	ENSPREG00000008522	rbm25b	57	74.370	Poecilia_reticulata
ENSSFOG00015007093	rbm25	100	77.333	ENSPREG00000009228	rbm25a	61	83.871	Poecilia_reticulata
ENSSFOG00015007093	rbm25	57	79.783	ENSPNYG00000022596	rbm25a	51	78.670	Pundamilia_nyererei
ENSSFOG00015007093	rbm25	100	75.485	ENSPNAG00000012024	rbm25b	57	76.433	Pygocentrus_nattereri
ENSSFOG00015007093	rbm25	57	78.903	ENSSMAG00000009745	rbm25a	58	77.848	Scophthalmus_maximus
ENSSFOG00015007093	rbm25	58	73.333	ENSSMAG00000002520	rbm25b	58	75.000	Scophthalmus_maximus
ENSSFOG00015007093	rbm25	57	80.085	ENSSDUG00000017984	rbm25a	58	79.873	Seriola_dumerili
ENSSFOG00015007093	rbm25	57	75.054	ENSSLDG00000024573	rbm25b	95	78.082	Seriola_lalandi_dorsalis
ENSSFOG00015007093	rbm25	57	80.085	ENSSLDG00000010342	rbm25a	57	79.873	Seriola_lalandi_dorsalis
ENSSFOG00015007093	rbm25	57	77.938	ENSSPAG00000011114	rbm25a	57	76.701	Stegastes_partitus
ENSSFOG00015007093	rbm25	58	76.151	ENSSPAG00000016168	rbm25b	58	76.170	Stegastes_partitus
ENSSFOG00015007093	rbm25	58	75.687	ENSTRUG00000017964	rbm25b	58	75.319	Takifugu_rubripes
ENSSFOG00015007093	rbm25	58	73.885	ENSTRUG00000003076	rbm25a	57	73.932	Takifugu_rubripes
ENSSFOG00015007093	rbm25	95	65.441	ENSTNIG00000012222	rbm25b	65	73.913	Tetraodon_nigroviridis
ENSSFOG00015007093	rbm25	62	82.692	ENSTBEG00000010538	-	65	82.692	Tupaia_belangeri
ENSSFOG00015007093	rbm25	52	75.949	ENSVPAG00000009052	RBM25	75	80.000	Vicugna_pacos
ENSSFOG00015007093	rbm25	56	65.392	ENSXETG00000021857	rbm25	52	76.782	Xenopus_tropicalis
ENSSFOG00015007093	rbm25	100	76.082	ENSXCOG00000004043	RBM25	52	77.221	Xiphophorus_couchianus
ENSSFOG00015007093	rbm25	100	69.748	ENSXCOG00000002222	rbm25b	54	68.966	Xiphophorus_couchianus
ENSSFOG00015007093	rbm25	100	73.333	ENSXMAG00000009077	RBM25	50	72.893	Xiphophorus_maculatus
ENSSFOG00015007093	rbm25	100	72.071	ENSXMAG00000017290	rbm25b	57	74.004	Xiphophorus_maculatus