EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015007131 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-335m2.2 (1 of many)
Alias: im:7148349|si:ch211-125c5.1
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 28760 bases
Position: chrKV410884.1:6471707-6500466
Accession: 108928199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015011017	RRM_5	PF13893.6	1.2e-06	1	2
ENSSFOP00015011017	RRM_5	PF13893.6	1.2e-06	2	2
ENSSFOP00015011017	RRM_1	PF00076.22	1.9e-21	1	2
ENSSFOP00015011017	RRM_1	PF00076.22	1.9e-21	2	2
ENSSFOP00015010999	RRM_1	PF00076.22	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015011147	-	11618	-	ENSSFOP00015010999	3124 (aa)	-	-
ENSSFOT00015011165	-	11823	XM_018742017	ENSSFOP00015011017	3127 (aa)	XP_018597533	-

Gene Model

Click here to download ENSSFOG00015007131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015007131	si:ch1073-335m2.2	100	62.047	ENSSFOG00015010267	si:ch1073-335m2.2	86	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSG00000065526	SPEN	84	65.741	Homo_sapiens
ENSSFOG00015007131	si:ch1073-335m2.2	100	56.170	ENSAPOG00000009853	-	86	66.667	Acanthochromis_polyacanthus
ENSSFOG00015007131	si:ch1073-335m2.2	94	78.010	ENSAPOG00000011411	si:ch1073-335m2.2	88	78.010	Acanthochromis_polyacanthus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSAMEG00000011817	SPEN	84	65.741	Ailuropoda_melanoleuca
ENSSFOG00015007131	si:ch1073-335m2.2	100	56.326	ENSAOCG00000014505	-	86	67.593	Amphiprion_ocellaris
ENSSFOG00015007131	si:ch1073-335m2.2	96	70.968	ENSAOCG00000008077	si:ch1073-335m2.2	96	70.968	Amphiprion_ocellaris
ENSSFOG00015007131	si:ch1073-335m2.2	94	75.676	ENSAPEG00000013515	si:ch1073-335m2.2	88	74.384	Amphiprion_percula
ENSSFOG00015007131	si:ch1073-335m2.2	100	56.246	ENSAPEG00000010288	-	86	67.593	Amphiprion_percula
ENSSFOG00015007131	si:ch1073-335m2.2	100	55.933	ENSATEG00000005627	-	88	66.667	Anabas_testudineus
ENSSFOG00015007131	si:ch1073-335m2.2	97	84.211	ENSATEG00000007674	si:ch1073-335m2.2	87	84.211	Anabas_testudineus
ENSSFOG00015007131	si:ch1073-335m2.2	96	64.815	ENSAPLG00000012618	SPEN	88	64.815	Anas_platyrhynchos
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSANAG00000034428	SPEN	84	65.741	Aotus_nancymaae
ENSSFOG00015007131	si:ch1073-335m2.2	97	85.207	ENSACLG00000021433	si:ch1073-335m2.2	90	85.207	Astatotilapia_calliptera
ENSSFOG00015007131	si:ch1073-335m2.2	100	54.763	ENSACLG00000016922	-	88	65.741	Astatotilapia_calliptera
ENSSFOG00015007131	si:ch1073-335m2.2	100	56.279	ENSAMXG00000012485	spen	86	66.667	Astyanax_mexicanus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSBTAG00000018729	SPEN	84	65.741	Bos_taurus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSCJAG00000008527	SPEN	84	65.741	Callithrix_jacchus
ENSSFOG00015007131	si:ch1073-335m2.2	82	65.741	ENSCAFG00000016132	-	79	65.741	Canis_familiaris
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSCHIG00000025070	SPEN	84	65.741	Capra_hircus
ENSSFOG00015007131	si:ch1073-335m2.2	96	64.815	ENSTSYG00000036016	SPEN	91	64.815	Carlito_syrichta
ENSSFOG00015007131	si:ch1073-335m2.2	89	65.741	ENSCAPG00000013803	SPEN	85	65.741	Cavia_aperea
ENSSFOG00015007131	si:ch1073-335m2.2	83	65.741	ENSCPOG00000014036	SPEN	83	65.741	Cavia_porcellus
ENSSFOG00015007131	si:ch1073-335m2.2	89	65.741	ENSCCAG00000020258	SPEN	95	65.741	Cebus_capucinus
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSCATG00000015079	SPEN	88	65.741	Cercocebus_atys
ENSSFOG00015007131	si:ch1073-335m2.2	96	64.815	ENSCPBG00000010477	SPEN	87	64.815	Chrysemys_picta_bellii
ENSSFOG00015007131	si:ch1073-335m2.2	92	48.917	ENSCANG00000034547	SPEN	85	46.562	Colobus_angolensis_palliatus
ENSSFOG00015007131	si:ch1073-335m2.2	100	54.111	ENSCSEG00000003915	-	86	66.667	Cynoglossus_semilaevis
ENSSFOG00015007131	si:ch1073-335m2.2	100	52.927	ENSCVAG00000016346	-	87	52.958	Cyprinodon_variegatus
ENSSFOG00015007131	si:ch1073-335m2.2	94	85.799	ENSCVAG00000009075	si:ch1073-335m2.2	87	85.799	Cyprinodon_variegatus
ENSSFOG00015007131	si:ch1073-335m2.2	96	64.815	ENSDARG00000074245	spen	86	64.815	Danio_rerio
ENSSFOG00015007131	si:ch1073-335m2.2	94	80.108	ENSDARG00000074332	si:ch1073-335m2.2	87	80.108	Danio_rerio
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSDNOG00000041948	SPEN	84	65.741	Dasypus_novemcinctus
ENSSFOG00015007131	si:ch1073-335m2.2	95	47.708	ENSDORG00000023909	Spen	88	40.953	Dipodomys_ordii
ENSSFOG00015007131	si:ch1073-335m2.2	56	61.404	ENSETEG00000016692	-	50	61.153	Echinops_telfairi
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSEASG00005015911	SPEN	88	65.741	Equus_asinus_asinus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSECAG00000008833	SPEN	88	65.741	Equus_caballus
ENSSFOG00015007131	si:ch1073-335m2.2	56	90.698	ENSEEUG00000010255	SPEN	54	90.698	Erinaceus_europaeus
ENSSFOG00015007131	si:ch1073-335m2.2	96	75.248	ENSELUG00000007726	si:ch1073-335m2.2	87	75.248	Esox_lucius
ENSSFOG00015007131	si:ch1073-335m2.2	60	64.815	ENSFALG00000003551	SPEN	99	64.815	Ficedula_albicollis
ENSSFOG00015007131	si:ch1073-335m2.2	97	76.500	ENSGMOG00000008156	si:ch1073-335m2.2	87	76.500	Gadus_morhua
ENSSFOG00015007131	si:ch1073-335m2.2	100	49.249	ENSGMOG00000008397	-	87	65.741	Gadus_morhua
ENSSFOG00015007131	si:ch1073-335m2.2	96	64.815	ENSGALG00000036932	SPEN	87	64.815	Gallus_gallus
ENSSFOG00015007131	si:ch1073-335m2.2	53	84.211	ENSGAFG00000021570	si:ch1073-335m2.2	87	84.211	Gambusia_affinis
ENSSFOG00015007131	si:ch1073-335m2.2	100	53.462	ENSGAFG00000015819	-	86	66.667	Gambusia_affinis
ENSSFOG00015007131	si:ch1073-335m2.2	94	53.173	ENSGACG00000001176	si:ch1073-335m2.2	86	62.037	Gasterosteus_aculeatus
ENSSFOG00015007131	si:ch1073-335m2.2	100	53.837	ENSGACG00000005341	-	87	64.815	Gasterosteus_aculeatus
ENSSFOG00015007131	si:ch1073-335m2.2	99	93.519	ENSGAGG00000020785	SPEN	89	64.815	Gopherus_agassizii
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSGGOG00000012041	SPEN	84	65.741	Gorilla_gorilla
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSHBUG00000020626	-	86	65.741	Haplochromis_burtoni
ENSSFOG00015007131	si:ch1073-335m2.2	97	85.207	ENSHBUG00000023253	si:ch1073-335m2.2	87	85.207	Haplochromis_burtoni
ENSSFOG00015007131	si:ch1073-335m2.2	63	64.815	ENSHGLG00000019259	SPEN	61	64.815	Heterocephalus_glaber_female
ENSSFOG00015007131	si:ch1073-335m2.2	60	64.815	ENSHGLG00100019294	SPEN	63	64.815	Heterocephalus_glaber_male
ENSSFOG00015007131	si:ch1073-335m2.2	95	82.540	ENSHCOG00000006004	si:ch1073-335m2.2	89	82.812	Hippocampus_comes
ENSSFOG00015007131	si:ch1073-335m2.2	100	54.057	ENSIPUG00000021668	spen	86	63.889	Ictalurus_punctatus
ENSSFOG00015007131	si:ch1073-335m2.2	98	76.087	ENSIPUG00000018212	si:ch1073-335m2.2	91	76.087	Ictalurus_punctatus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSJJAG00000010882	Spen	85	65.741	Jaculus_jaculus
ENSSFOG00015007131	si:ch1073-335m2.2	100	53.789	ENSKMAG00000003882	-	86	65.741	Kryptolebias_marmoratus
ENSSFOG00015007131	si:ch1073-335m2.2	93	77.083	ENSKMAG00000021725	si:ch1073-335m2.2	86	77.083	Kryptolebias_marmoratus
ENSSFOG00015007131	si:ch1073-335m2.2	96	52.954	ENSLBEG00000019129	-	100	52.664	Labrus_bergylta
ENSSFOG00015007131	si:ch1073-335m2.2	97	82.840	ENSLBEG00000020855	si:ch1073-335m2.2	87	82.840	Labrus_bergylta
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSLACG00000003258	SPEN	62	91.925	Latimeria_chalumnae
ENSSFOG00015007131	si:ch1073-335m2.2	100	62.161	ENSLOCG00000007896	si:ch1073-335m2.2	88	65.741	Lepisosteus_oculatus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSLAFG00000004524	SPEN	84	65.741	Loxodonta_africana
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSMFAG00000041974	SPEN	84	65.741	Macaca_fascicularis
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSMMUG00000008026	SPEN	84	65.741	Macaca_mulatta
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSMNEG00000042402	SPEN	84	65.741	Macaca_nemestrina
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSMLEG00000039293	SPEN	84	65.741	Mandrillus_leucophaeus
ENSSFOG00015007131	si:ch1073-335m2.2	97	85.629	ENSMAMG00000023870	si:ch1073-335m2.2	87	85.629	Mastacembelus_armatus
ENSSFOG00015007131	si:ch1073-335m2.2	100	54.780	ENSMZEG00005021491	-	96	65.741	Maylandia_zebra
ENSSFOG00015007131	si:ch1073-335m2.2	97	85.207	ENSMZEG00005011762	si:ch1073-335m2.2	87	85.207	Maylandia_zebra
ENSSFOG00015007131	si:ch1073-335m2.2	73	65.741	ENSMAUG00000008318	Spen	68	65.741	Mesocricetus_auratus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSMICG00000030994	SPEN	74	65.741	Microcebus_murinus
ENSSFOG00015007131	si:ch1073-335m2.2	94	77.041	ENSMMOG00000021742	si:ch1073-335m2.2	88	77.041	Mola_mola
ENSSFOG00015007131	si:ch1073-335m2.2	100	55.961	ENSMALG00000008625	-	86	66.667	Monopterus_albus
ENSSFOG00015007131	si:ch1073-335m2.2	75	65.741	ENSMUSG00000040761	Spen	68	65.741	Mus_musculus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	MGP_PahariEiJ_G0029076	Spen	85	65.741	Mus_pahari
ENSSFOG00015007131	si:ch1073-335m2.2	97	91.379	ENSMPUG00000016317	SPEN	85	65.741	Mustela_putorius_furo
ENSSFOG00015007131	si:ch1073-335m2.2	94	89.247	ENSMLUG00000010144	SPEN	83	89.247	Myotis_lucifugus
ENSSFOG00015007131	si:ch1073-335m2.2	90	65.741	ENSNGAG00000000641	Spen	78	65.741	Nannospalax_galili
ENSSFOG00015007131	si:ch1073-335m2.2	97	85.207	ENSNBRG00000005733	si:ch1073-335m2.2	87	85.207	Neolamprologus_brichardi
ENSSFOG00015007131	si:ch1073-335m2.2	97	53.578	ENSNBRG00000022090	-	100	53.419	Neolamprologus_brichardi
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSNLEG00000007652	SPEN	84	65.741	Nomascus_leucogenys
ENSSFOG00015007131	si:ch1073-335m2.2	88	86.458	ENSMEUG00000002422	SPEN	78	86.458	Notamacropus_eugenii
ENSSFOG00015007131	si:ch1073-335m2.2	85	62.640	ENSOPRG00000015800	SPEN	72	65.741	Ochotona_princeps
ENSSFOG00015007131	si:ch1073-335m2.2	100	44.620	ENSODEG00000016644	SPEN	88	45.016	Octodon_degus
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSONIG00000006573	-	87	65.741	Oreochromis_niloticus
ENSSFOG00015007131	si:ch1073-335m2.2	100	49.845	ENSORLG00000028894	-	99	66.667	Oryzias_latipes
ENSSFOG00015007131	si:ch1073-335m2.2	100	50.078	ENSORLG00020007735	-	99	66.667	Oryzias_latipes_hni
ENSSFOG00015007131	si:ch1073-335m2.2	96	66.667	ENSORLG00015022085	-	86	66.667	Oryzias_latipes_hsok
ENSSFOG00015007131	si:ch1073-335m2.2	92	79.545	ENSORLG00015005537	si:ch1073-335m2.2	87	76.684	Oryzias_latipes_hsok
ENSSFOG00015007131	si:ch1073-335m2.2	96	66.667	ENSOMEG00000007639	-	86	66.667	Oryzias_melastigma
ENSSFOG00015007131	si:ch1073-335m2.2	97	77.202	ENSOMEG00000004509	si:ch1073-335m2.2	87	77.202	Oryzias_melastigma
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSOGAG00000025110	SPEN	84	65.741	Otolemur_garnettii
ENSSFOG00015007131	si:ch1073-335m2.2	85	65.741	ENSPPAG00000035690	SPEN	85	65.741	Pan_paniscus
ENSSFOG00015007131	si:ch1073-335m2.2	85	65.741	ENSPTRG00000000210	SPEN	84	65.741	Pan_troglodytes
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSPANG00000006293	SPEN	84	65.741	Papio_anubis
ENSSFOG00015007131	si:ch1073-335m2.2	100	75.254	ENSPKIG00000010492	si:ch1073-335m2.2	90	75.286	Paramormyrops_kingsleyae
ENSSFOG00015007131	si:ch1073-335m2.2	100	60.767	ENSPKIG00000002617	SPEN	86	65.741	Paramormyrops_kingsleyae
ENSSFOG00015007131	si:ch1073-335m2.2	96	63.208	ENSPSIG00000008026	SPEN	88	63.208	Pelodiscus_sinensis
ENSSFOG00015007131	si:ch1073-335m2.2	83	65.741	ENSPEMG00000022997	Spen	77	65.741	Peromyscus_maniculatus_bairdii
ENSSFOG00015007131	si:ch1073-335m2.2	97	86.391	ENSPFOG00000017986	si:ch1073-335m2.2	87	86.391	Poecilia_formosa
ENSSFOG00015007131	si:ch1073-335m2.2	93	86.391	ENSPLAG00000016625	si:ch1073-335m2.2	87	86.391	Poecilia_latipinna
ENSSFOG00015007131	si:ch1073-335m2.2	97	86.391	ENSPMEG00000002674	si:ch1073-335m2.2	90	86.391	Poecilia_mexicana
ENSSFOG00015007131	si:ch1073-335m2.2	100	53.597	ENSPMEG00000006764	-	86	66.667	Poecilia_mexicana
ENSSFOG00015007131	si:ch1073-335m2.2	100	53.684	ENSPREG00000010399	-	86	66.667	Poecilia_reticulata
ENSSFOG00015007131	si:ch1073-335m2.2	97	86.391	ENSPREG00000005357	si:ch1073-335m2.2	87	86.391	Poecilia_reticulata
ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	ENSPPYG00000001834	SPEN	84	65.741	Pongo_abelii
ENSSFOG00015007131	si:ch1073-335m2.2	96	44.882	ENSPCOG00000021735	SPEN	84	44.669	Propithecus_coquereli
ENSSFOG00015007131	si:ch1073-335m2.2	71	65.741	ENSPVAG00000013794	SPEN	62	65.741	Pteropus_vampyrus
ENSSFOG00015007131	si:ch1073-335m2.2	100	54.811	ENSPNYG00000012379	-	87	65.741	Pundamilia_nyererei
ENSSFOG00015007131	si:ch1073-335m2.2	97	85.207	ENSPNYG00000009042	si:ch1073-335m2.2	87	85.207	Pundamilia_nyererei
ENSSFOG00015007131	si:ch1073-335m2.2	100	59.142	ENSPNAG00000020795	spen	86	65.741	Pygocentrus_nattereri
ENSSFOG00015007131	si:ch1073-335m2.2	98	80.978	ENSPNAG00000011452	si:ch1073-335m2.2	88	80.978	Pygocentrus_nattereri
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSRBIG00000039654	SPEN	85	65.741	Rhinopithecus_bieti
ENSSFOG00015007131	si:ch1073-335m2.2	84	65.741	ENSRROG00000035686	SPEN	86	65.741	Rhinopithecus_roxellana
ENSSFOG00015007131	si:ch1073-335m2.2	97	67.368	ENSSBOG00000028770	SPEN	85	65.017	Saimiri_boliviensis_boliviensis
ENSSFOG00015007131	si:ch1073-335m2.2	92	64.815	ENSSHAG00000004960	SPEN	88	64.815	Sarcophilus_harrisii
ENSSFOG00015007131	si:ch1073-335m2.2	100	56.086	ENSSMAG00000008996	-	86	66.667	Scophthalmus_maximus
ENSSFOG00015007131	si:ch1073-335m2.2	97	85.799	ENSSDUG00000008416	si:ch1073-335m2.2	87	85.799	Seriola_dumerili
ENSSFOG00015007131	si:ch1073-335m2.2	100	57.580	ENSSDUG00000003476	-	88	66.667	Seriola_dumerili
ENSSFOG00015007131	si:ch1073-335m2.2	100	57.258	ENSSLDG00000012950	-	86	66.667	Seriola_lalandi_dorsalis
ENSSFOG00015007131	si:ch1073-335m2.2	95	77.083	ENSSLDG00000023347	si:ch1073-335m2.2	87	77.083	Seriola_lalandi_dorsalis
ENSSFOG00015007131	si:ch1073-335m2.2	99	93.519	ENSSPUG00000001866	-	60	52.031	Sphenodon_punctatus
ENSSFOG00015007131	si:ch1073-335m2.2	100	56.455	ENSSPAG00000006014	-	86	66.667	Stegastes_partitus
ENSSFOG00015007131	si:ch1073-335m2.2	97	75.369	ENSSPAG00000012454	si:ch1073-335m2.2	88	75.369	Stegastes_partitus
ENSSFOG00015007131	si:ch1073-335m2.2	82	65.741	ENSSSCG00000034484	SPEN	83	65.741	Sus_scrofa
ENSSFOG00015007131	si:ch1073-335m2.2	96	85.207	ENSTRUG00000021008	si:ch1073-335m2.2	99	85.207	Takifugu_rubripes
ENSSFOG00015007131	si:ch1073-335m2.2	100	53.551	ENSTRUG00000024350	-	86	66.667	Takifugu_rubripes
ENSSFOG00015007131	si:ch1073-335m2.2	96	81.963	ENSTNIG00000010907	-	88	83.019	Tetraodon_nigroviridis
ENSSFOG00015007131	si:ch1073-335m2.2	93	81.461	ENSTNIG00000014666	si:ch1073-335m2.2	85	81.461	Tetraodon_nigroviridis
ENSSFOG00015007131	si:ch1073-335m2.2	71	88.889	ENSTBEG00000003628	SPEN	61	91.379	Tupaia_belangeri
ENSSFOG00015007131	si:ch1073-335m2.2	71	91.379	ENSTTRG00000015704	SPEN	60	91.379	Tursiops_truncatus
ENSSFOG00015007131	si:ch1073-335m2.2	96	91.954	ENSUAMG00000009600	SPEN	84	65.741	Ursus_americanus
ENSSFOG00015007131	si:ch1073-335m2.2	96	91.954	ENSUMAG00000021641	SPEN	84	65.741	Ursus_maritimus
ENSSFOG00015007131	si:ch1073-335m2.2	96	91.379	ENSVVUG00000028951	SPEN	90	65.741	Vulpes_vulpes
ENSSFOG00015007131	si:ch1073-335m2.2	92	73.333	ENSXCOG00000004516	si:ch1073-335m2.2	88	73.333	Xiphophorus_couchianus
ENSSFOG00015007131	si:ch1073-335m2.2	98	72.596	ENSXMAG00000029887	si:ch1073-335m2.2	87	72.596	Xiphophorus_maculatus
ENSSFOG00015007131	si:ch1073-335m2.2	100	53.333	ENSXMAG00000021384	-	86	66.667	Xiphophorus_maculatus