EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015007179 (Gene tree)
Gene ID: 108938893
Gene Symbol: yars
Alias: TyrRS|cb204|wu:fk52b08
Full Name: tyrosyl-tRNA synthetase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12055 bases
Position: chrKV411182.1:525020-537074
Accession: 108938893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015011154	tRNA_bind	PF01588.20	3.7e-31	1	1
ENSSFOP00015011154	tRNA-synt_1b	PF00579.25	4.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015011303	-	7102	XM_018759871	ENSSFOP00015011154	528 (aa)	XP_018615387	A0A1W5AIB5

Gene Model

Click here to download ENSSFOG00015007179's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007179	yars	100	82.008	ENSG00000134684	YARS	100	82.008	Homo_sapiens
ENSSFOG00015007179	yars	100	81.614	ENSAPOG00000020788	yars	100	81.989	Acanthochromis_polyacanthus
ENSSFOG00015007179	yars	100	82.765	ENSAMEG00000007476	YARS	100	82.765	Ailuropoda_melanoleuca
ENSSFOG00015007179	yars	100	84.091	ENSACIG00000017504	yars	100	84.091	Amphilophus_citrinellus
ENSSFOG00015007179	yars	100	82.584	ENSAOCG00000009987	yars	100	82.772	Amphiprion_ocellaris
ENSSFOG00015007179	yars	100	82.584	ENSAPEG00000001273	yars	100	82.772	Amphiprion_percula
ENSSFOG00015007179	yars	100	82.959	ENSATEG00000005301	yars	100	83.333	Anabas_testudineus
ENSSFOG00015007179	yars	99	74.242	ENSAPLG00000005739	YARS	98	75.097	Anas_platyrhynchos
ENSSFOG00015007179	yars	99	78.937	ENSACAG00000003568	YARS	99	78.937	Anolis_carolinensis
ENSSFOG00015007179	yars	100	81.629	ENSANAG00000034533	YARS	100	81.629	Aotus_nancymaae
ENSSFOG00015007179	yars	100	83.712	ENSACLG00000004618	yars	100	83.902	Astatotilapia_calliptera
ENSSFOG00015007179	yars	100	86.604	ENSAMXG00000010993	yars	100	86.604	Astyanax_mexicanus
ENSSFOG00015007179	yars	100	82.197	ENSBTAG00000018065	YARS	100	82.197	Bos_taurus
ENSSFOG00015007179	yars	100	81.250	ENSCJAG00000001037	YARS	100	81.250	Callithrix_jacchus
ENSSFOG00015007179	yars	100	81.818	ENSCAFG00000010481	YARS	94	81.818	Canis_familiaris
ENSSFOG00015007179	yars	100	81.853	ENSCAFG00020025379	YARS	100	81.853	Canis_lupus_dingo
ENSSFOG00015007179	yars	100	82.576	ENSCHIG00000014340	YARS	100	82.576	Capra_hircus
ENSSFOG00015007179	yars	100	81.818	ENSTSYG00000005019	YARS	100	81.818	Carlito_syrichta
ENSSFOG00015007179	yars	90	58.351	ENSCAPG00000008627	YARS	100	58.351	Cavia_aperea
ENSSFOG00015007179	yars	100	80.303	ENSCPOG00000009614	YARS	94	80.303	Cavia_porcellus
ENSSFOG00015007179	yars	100	81.629	ENSCCAG00000036757	YARS	98	81.629	Cebus_capucinus
ENSSFOG00015007179	yars	100	82.008	ENSCATG00000044394	YARS	100	82.008	Cercocebus_atys
ENSSFOG00015007179	yars	100	80.492	ENSCLAG00000008977	YARS	93	80.492	Chinchilla_lanigera
ENSSFOG00015007179	yars	100	82.008	ENSCSAG00000001062	YARS	100	82.008	Chlorocebus_sabaeus
ENSSFOG00015007179	yars	96	73.281	ENSCHOG00000003939	YARS	100	73.084	Choloepus_hoffmanni
ENSSFOG00015007179	yars	100	80.492	ENSCPBG00000010998	YARS	100	80.492	Chrysemys_picta_bellii
ENSSFOG00015007179	yars	99	69.187	ENSCING00000005113	-	99	69.754	Ciona_intestinalis
ENSSFOG00015007179	yars	99	66.163	ENSCSAVG00000003706	-	99	66.541	Ciona_savignyi
ENSSFOG00015007179	yars	100	81.250	ENSCANG00000038285	YARS	100	81.250	Colobus_angolensis_palliatus
ENSSFOG00015007179	yars	100	82.576	ENSCGRG00001010863	Yars	100	78.220	Cricetulus_griseus_chok1gshd
ENSSFOG00015007179	yars	100	82.576	ENSCGRG00000007526	Yars	94	82.576	Cricetulus_griseus_crigri
ENSSFOG00015007179	yars	100	82.420	ENSCSEG00000009643	yars	100	82.609	Cynoglossus_semilaevis
ENSSFOG00015007179	yars	100	83.932	ENSCVAG00000016583	yars	100	83.932	Cyprinodon_variegatus
ENSSFOG00015007179	yars	100	86.767	ENSDARG00000035913	yars	100	92.829	Danio_rerio
ENSSFOG00015007179	yars	100	82.197	ENSDNOG00000000536	YARS	100	82.197	Dasypus_novemcinctus
ENSSFOG00015007179	yars	100	82.386	ENSDORG00000011871	Yars	100	82.386	Dipodomys_ordii
ENSSFOG00015007179	yars	99	65.589	FBgn0027080	TyrRS	99	65.970	Drosophila_melanogaster
ENSSFOG00015007179	yars	87	88.095	ENSETEG00000000215	YARS	87	88.095	Echinops_telfairi
ENSSFOG00015007179	yars	99	67.742	ENSEBUG00000004750	yars	99	67.742	Eptatretus_burgeri
ENSSFOG00015007179	yars	99	81.992	ENSEASG00005011762	YARS	93	81.439	Equus_asinus_asinus
ENSSFOG00015007179	yars	99	81.992	ENSECAG00000010015	YARS	68	81.439	Equus_caballus
ENSSFOG00015007179	yars	88	64.211	ENSEEUG00000005992	-	88	64.211	Erinaceus_europaeus
ENSSFOG00015007179	yars	100	86.932	ENSELUG00000017171	yars	100	86.932	Esox_lucius
ENSSFOG00015007179	yars	87	91.228	ENSFCAG00000000704	YARS	99	91.031	Felis_catus
ENSSFOG00015007179	yars	99	80.038	ENSFALG00000000592	YARS	93	80.115	Ficedula_albicollis
ENSSFOG00015007179	yars	100	80.492	ENSFDAG00000006620	YARS	94	80.492	Fukomys_damarensis
ENSSFOG00015007179	yars	100	82.519	ENSFHEG00000022444	yars	100	82.895	Fundulus_heteroclitus
ENSSFOG00015007179	yars	96	80.354	ENSGMOG00000006555	yars	100	80.354	Gadus_morhua
ENSSFOG00015007179	yars	99	80.306	ENSGALG00000003563	YARS	97	80.306	Gallus_gallus
ENSSFOG00015007179	yars	100	81.921	ENSGACG00000008516	yars	100	82.863	Gasterosteus_aculeatus
ENSSFOG00015007179	yars	100	80.114	ENSGAGG00000024290	YARS	100	80.114	Gopherus_agassizii
ENSSFOG00015007179	yars	100	82.008	ENSGGOG00000014013	YARS	100	82.008	Gorilla_gorilla
ENSSFOG00015007179	yars	100	82.617	ENSHBUG00000018909	yars	100	82.804	Haplochromis_burtoni
ENSSFOG00015007179	yars	100	79.735	ENSHGLG00000013843	YARS	94	79.735	Heterocephalus_glaber_female
ENSSFOG00015007179	yars	100	78.409	ENSHGLG00100002785	-	100	78.409	Heterocephalus_glaber_male
ENSSFOG00015007179	yars	70	76.294	ENSHGLG00100020546	-	99	76.294	Heterocephalus_glaber_male
ENSSFOG00015007179	yars	100	79.815	ENSHCOG00000006672	yars	100	80.407	Hippocampus_comes
ENSSFOG00015007179	yars	99	83.144	ENSIPUG00000021749	yars	99	83.144	Ictalurus_punctatus
ENSSFOG00015007179	yars	100	82.765	ENSSTOG00000012031	YARS	94	82.765	Ictidomys_tridecemlineatus
ENSSFOG00015007179	yars	100	81.439	ENSJJAG00000013281	Yars	93	81.439	Jaculus_jaculus
ENSSFOG00015007179	yars	100	83.459	ENSKMAG00000021752	yars	100	83.459	Kryptolebias_marmoratus
ENSSFOG00015007179	yars	100	82.056	ENSLBEG00000024080	yars	100	82.617	Labrus_bergylta
ENSSFOG00015007179	yars	100	79.924	ENSLACG00000015577	YARS	100	79.924	Latimeria_chalumnae
ENSSFOG00015007179	yars	99	85.579	ENSLOCG00000002165	yars	99	85.579	Lepisosteus_oculatus
ENSSFOG00015007179	yars	100	81.439	ENSLAFG00000003786	YARS	96	81.439	Loxodonta_africana
ENSSFOG00015007179	yars	100	76.326	ENSMFAG00000040933	YARS	100	76.515	Macaca_fascicularis
ENSSFOG00015007179	yars	100	81.818	ENSMMUG00000019746	YARS	100	81.818	Macaca_mulatta
ENSSFOG00015007179	yars	100	75.706	ENSMNEG00000031865	YARS	100	75.706	Macaca_nemestrina
ENSSFOG00015007179	yars	100	82.008	ENSMLEG00000041315	YARS	100	82.008	Mandrillus_leucophaeus
ENSSFOG00015007179	yars	100	83.835	ENSMAMG00000006092	yars	100	83.835	Mastacembelus_armatus
ENSSFOG00015007179	yars	100	82.176	ENSMZEG00005011426	yars	100	82.739	Maylandia_zebra
ENSSFOG00015007179	yars	97	80.588	ENSMGAG00000005063	YARS	97	80.588	Meleagris_gallopavo
ENSSFOG00015007179	yars	97	82.456	ENSMAUG00000021126	Yars	99	82.456	Mesocricetus_auratus
ENSSFOG00015007179	yars	100	82.765	ENSMICG00000011204	YARS	100	82.765	Microcebus_murinus
ENSSFOG00015007179	yars	100	82.765	ENSMOCG00000011342	Yars	94	82.765	Microtus_ochrogaster
ENSSFOG00015007179	yars	100	78.977	ENSMMOG00000021133	yars	100	78.977	Mola_mola
ENSSFOG00015007179	yars	100	81.061	ENSMODG00000017404	YARS	100	81.061	Monodelphis_domestica
ENSSFOG00015007179	yars	62	88.146	ENSMALG00000003648	yars	90	88.146	Monopterus_albus
ENSSFOG00015007179	yars	100	81.818	MGP_CAROLIEiJ_G0026513	Yars	94	81.818	Mus_caroli
ENSSFOG00015007179	yars	100	82.197	ENSMUSG00000028811	Yars	94	82.197	Mus_musculus
ENSSFOG00015007179	yars	100	81.818	MGP_PahariEiJ_G0028844	Yars	94	81.818	Mus_pahari
ENSSFOG00015007179	yars	100	81.818	MGP_SPRETEiJ_G0027493	Yars	94	81.818	Mus_spretus
ENSSFOG00015007179	yars	100	82.008	ENSMLUG00000000759	YARS	100	82.008	Myotis_lucifugus
ENSSFOG00015007179	yars	98	81.431	ENSNGAG00000001419	Yars	100	82.318	Nannospalax_galili
ENSSFOG00015007179	yars	100	84.280	ENSNBRG00000020413	yars	100	84.470	Neolamprologus_brichardi
ENSSFOG00015007179	yars	100	81.439	ENSNLEG00000002922	YARS	100	81.439	Nomascus_leucogenys
ENSSFOG00015007179	yars	75	83.529	ENSMEUG00000011824	-	75	83.529	Notamacropus_eugenii
ENSSFOG00015007179	yars	100	76.894	ENSOPRG00000003669	YARS	100	76.894	Ochotona_princeps
ENSSFOG00015007179	yars	100	80.682	ENSODEG00000005363	YARS	94	80.682	Octodon_degus
ENSSFOG00015007179	yars	100	83.364	ENSONIG00000015400	yars	100	83.551	Oreochromis_niloticus
ENSSFOG00015007179	yars	93	75.800	ENSOANG00000011779	YARS	100	75.800	Ornithorhynchus_anatinus
ENSSFOG00015007179	yars	100	82.576	ENSOCUG00000010007	YARS	100	82.576	Oryctolagus_cuniculus
ENSSFOG00015007179	yars	99	81.973	ENSORLG00000013982	yars	97	81.973	Oryzias_latipes
ENSSFOG00015007179	yars	100	81.921	ENSORLG00020020750	yars	100	82.486	Oryzias_latipes_hni
ENSSFOG00015007179	yars	100	81.051	ENSORLG00015008963	yars	100	81.801	Oryzias_latipes_hsok
ENSSFOG00015007179	yars	100	82.298	ENSOMEG00000013016	yars	95	89.316	Oryzias_melastigma
ENSSFOG00015007179	yars	100	81.818	ENSOGAG00000007359	YARS	100	81.818	Otolemur_garnettii
ENSSFOG00015007179	yars	100	82.386	ENSOARG00000020897	YARS	93	82.386	Ovis_aries
ENSSFOG00015007179	yars	100	82.197	ENSPPAG00000035791	YARS	98	82.779	Pan_paniscus
ENSSFOG00015007179	yars	100	82.765	ENSPPRG00000023768	YARS	100	82.765	Panthera_pardus
ENSSFOG00015007179	yars	100	82.765	ENSPTIG00000003438	YARS	100	82.765	Panthera_tigris_altaica
ENSSFOG00015007179	yars	100	82.197	ENSPTRG00000000491	YARS	100	82.197	Pan_troglodytes
ENSSFOG00015007179	yars	100	82.008	ENSPANG00000009804	YARS	100	82.008	Papio_anubis
ENSSFOG00015007179	yars	100	87.311	ENSPKIG00000024596	yars	100	87.311	Paramormyrops_kingsleyae
ENSSFOG00015007179	yars	100	69.623	ENSPSIG00000006945	YARS	100	69.623	Pelodiscus_sinensis
ENSSFOG00015007179	yars	100	83.902	ENSPMGG00000022917	yars	100	83.902	Periophthalmus_magnuspinnatus
ENSSFOG00015007179	yars	100	81.818	ENSPEMG00000010746	Yars	94	81.818	Peromyscus_maniculatus_bairdii
ENSSFOG00015007179	yars	99	81.594	ENSPCIG00000022457	YARS	99	81.594	Phascolarctos_cinereus
ENSSFOG00015007179	yars	100	82.143	ENSPFOG00000014808	yars	100	82.331	Poecilia_formosa
ENSSFOG00015007179	yars	100	82.331	ENSPLAG00000020075	yars	100	82.519	Poecilia_latipinna
ENSSFOG00015007179	yars	100	82.143	ENSPMEG00000002803	yars	100	82.331	Poecilia_mexicana
ENSSFOG00015007179	yars	100	82.386	ENSPREG00000018280	yars	100	82.576	Poecilia_reticulata
ENSSFOG00015007179	yars	100	79.661	ENSPPYG00000001585	YARS	100	79.661	Pongo_abelii
ENSSFOG00015007179	yars	81	79.551	ENSPCAG00000011170	YARS	76	79.551	Procavia_capensis
ENSSFOG00015007179	yars	100	82.008	ENSPCOG00000021026	YARS	100	82.008	Propithecus_coquereli
ENSSFOG00015007179	yars	100	81.629	ENSPVAG00000010984	YARS	100	81.629	Pteropus_vampyrus
ENSSFOG00015007179	yars	100	83.712	ENSPNYG00000000860	yars	100	83.902	Pundamilia_nyererei
ENSSFOG00015007179	yars	100	85.633	ENSPNAG00000009622	yars	100	85.633	Pygocentrus_nattereri
ENSSFOG00015007179	yars	100	82.008	ENSRNOG00000007213	Yars	94	82.008	Rattus_norvegicus
ENSSFOG00015007179	yars	54	70.775	ENSRBIG00000044271	-	85	70.775	Rhinopithecus_bieti
ENSSFOG00015007179	yars	100	81.629	ENSRROG00000039913	YARS	100	81.629	Rhinopithecus_roxellana
ENSSFOG00015007179	yars	100	81.250	ENSSBOG00000030205	YARS	100	81.641	Saimiri_boliviensis_boliviensis
ENSSFOG00015007179	yars	100	80.492	ENSSHAG00000011851	YARS	100	80.492	Sarcophilus_harrisii
ENSSFOG00015007179	yars	100	80.682	ENSSMAG00000020736	yars	100	80.682	Scophthalmus_maximus
ENSSFOG00015007179	yars	100	84.528	ENSSDUG00000001782	yars	100	84.717	Seriola_dumerili
ENSSFOG00015007179	yars	100	85.227	ENSSLDG00000008268	yars	100	85.227	Seriola_lalandi_dorsalis
ENSSFOG00015007179	yars	86	75.824	ENSSARG00000012227	-	86	75.824	Sorex_araneus
ENSSFOG00015007179	yars	100	81.629	ENSSPUG00000000333	YARS	100	81.629	Sphenodon_punctatus
ENSSFOG00015007179	yars	100	82.959	ENSSPAG00000020632	yars	100	79.811	Stegastes_partitus
ENSSFOG00015007179	yars	100	82.955	ENSSSCG00000030369	YARS	100	82.955	Sus_scrofa
ENSSFOG00015007179	yars	99	80.306	ENSTGUG00000001342	YARS	99	80.306	Taeniopygia_guttata
ENSSFOG00015007179	yars	99	83.619	ENSTRUG00000014099	yars	99	83.619	Takifugu_rubripes
ENSSFOG00015007179	yars	99	81.214	ENSTNIG00000009237	yars	99	81.214	Tetraodon_nigroviridis
ENSSFOG00015007179	yars	96	73.674	ENSTBEG00000014374	YARS	100	73.674	Tupaia_belangeri
ENSSFOG00015007179	yars	100	81.250	ENSTTRG00000014987	YARS	100	81.250	Tursiops_truncatus
ENSSFOG00015007179	yars	100	79.167	ENSUAMG00000000392	YARS	100	77.127	Ursus_americanus
ENSSFOG00015007179	yars	100	73.970	ENSUMAG00000008312	YARS	93	73.970	Ursus_maritimus
ENSSFOG00015007179	yars	100	71.456	ENSVPAG00000010958	YARS	100	71.456	Vicugna_pacos
ENSSFOG00015007179	yars	100	81.818	ENSVVUG00000015468	YARS	99	82.192	Vulpes_vulpes
ENSSFOG00015007179	yars	100	76.326	ENSXETG00000027865	yars	100	76.326	Xenopus_tropicalis
ENSSFOG00015007179	yars	94	82.669	ENSXMAG00000016348	yars	81	82.869	Xiphophorus_maculatus