EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSFOG00015007498 (Gene tree)
Gene ID
108928202
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
20005 bases
Position
chrKV410884.1:6914466-6934470
Accession
108928202
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015011715CSDPF00313.225.7e-8315
ENSSFOP00015011715CSDPF00313.225.7e-8325
ENSSFOP00015011715CSDPF00313.225.7e-8335
ENSSFOP00015011715CSDPF00313.225.7e-8345
ENSSFOP00015011715CSDPF00313.225.7e-8355
ENSSFOP00015011701CSDPF00313.228.8e-8315
ENSSFOP00015011701CSDPF00313.228.8e-8325
ENSSFOP00015011701CSDPF00313.228.8e-8335
ENSSFOP00015011701CSDPF00313.228.8e-8345
ENSSFOP00015011701CSDPF00313.228.8e-8355
ENSSFOP00015011709CSDPF00313.221.2e-8215
ENSSFOP00015011709CSDPF00313.221.2e-8225
ENSSFOP00015011709CSDPF00313.221.2e-8235
ENSSFOP00015011709CSDPF00313.221.2e-8245
ENSSFOP00015011709CSDPF00313.221.2e-8255
ENSSFOP00015011689CSDPF00313.223.5e-8215
ENSSFOP00015011689CSDPF00313.223.5e-8225
ENSSFOP00015011689CSDPF00313.223.5e-8235
ENSSFOP00015011689CSDPF00313.223.5e-8245
ENSSFOP00015011689CSDPF00313.223.5e-8255
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015011866-2307-ENSSFOP00015011715768 (aa)--
ENSSFOT00015011852-3073XM_018742024ENSSFOP00015011701801 (aa)XP_018597540-
ENSSFOT00015011860-3041XM_018742022ENSSFOP00015011709873 (aa)XP_018597538A0A1W4Z151
ENSSFOT00015011839-3545-ENSSFOP00015011689910 (aa)--
Gene Model
Click here to download ENSSFOG00015007498's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007498's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015007498csde110076.983ENSG00000009307CSDE110080.882Homo_sapiens
ENSSFOG00015007498csde19395.238ENSAPOG00000015538csde110095.238Acanthochromis_polyacanthus
ENSSFOG00015007498csde110076.333ENSAMEG00000017129CSDE19476.364Ailuropoda_melanoleuca
ENSSFOG00015007498csde18882.667ENSACIG00000015175csde110083.558Amphilophus_citrinellus
ENSSFOG00015007498csde19395.238ENSAOCG00000011510csde110095.238Amphiprion_ocellaris
ENSSFOG00015007498csde19395.238ENSAPEG00000007194csde110095.238Amphiprion_percula
ENSSFOG00015007498csde110083.766ENSATEG00000003864csde110083.766Anabas_testudineus
ENSSFOG00015007498csde110079.454ENSAPLG00000008797CSDE110079.454Anas_platyrhynchos
ENSSFOG00015007498csde110079.726ENSACAG00000003120CSDE110079.379Anolis_carolinensis
ENSSFOG00015007498csde17962.585ENSANAG00000028396-9362.585Aotus_nancymaae
ENSSFOG00015007498csde110076.853ENSANAG00000024665CSDE19875.329Aotus_nancymaae
ENSSFOG00015007498csde110084.805ENSACLG00000013296csde110084.805Astatotilapia_calliptera
ENSSFOG00015007498csde110084.416ENSAMXG00000007436csde110084.416Astyanax_mexicanus
ENSSFOG00015007498csde110076.853ENSBTAG00000000678CSDE110076.853Bos_taurus
ENSSFOG00015007498csde110076.883ENSCJAG00000012565CSDE19875.449Callithrix_jacchus
ENSSFOG00015007498csde19877.158ENSCAFG00000009618CSDE19477.188Canis_familiaris
ENSSFOG00015007498csde110077.113ENSCAFG00020000481CSDE110077.113Canis_lupus_dingo
ENSSFOG00015007498csde110077.013ENSCHIG00000017250CSDE110076.983Capra_hircus
ENSSFOG00015007498csde110077.373ENSTSYG00000003747CSDE110077.373Carlito_syrichta
ENSSFOG00015007498csde110078.528ENSCAPG00000015128CSDE110078.528Cavia_aperea
ENSSFOG00015007498csde110073.192ENSCPOG00000040388CSDE110072.943Cavia_porcellus
ENSSFOG00015007498csde110076.883ENSCCAG00000036794CSDE110076.119Cebus_capucinus
ENSSFOG00015007498csde19557.683ENSCCAG00000033677-9957.683Cebus_capucinus
ENSSFOG00015007498csde19756.167ENSCCAG00000030878-9156.667Cebus_capucinus
ENSSFOG00015007498csde110076.983ENSCATG00000036962CSDE19776.983Cercocebus_atys
ENSSFOG00015007498csde110077.633ENSCLAG00000006618CSDE110077.633Chinchilla_lanigera
ENSSFOG00015007498csde110076.493ENSCSAG00000001658CSDE19875.569Chlorocebus_sabaeus
ENSSFOG00015007498csde19580.183ENSCHOG00000000918CSDE18880.183Choloepus_hoffmanni
ENSSFOG00015007498csde110079.324ENSCPBG00000016547CSDE110079.324Chrysemys_picta_bellii
ENSSFOG00015007498csde19942.363ENSCING00000014465-9842.317Ciona_intestinalis
ENSSFOG00015007498csde19642.402ENSCSAVG00000008100-10040.915Ciona_savignyi
ENSSFOG00015007498csde110076.983ENSCANG00000035096CSDE19776.983Colobus_angolensis_palliatus
ENSSFOG00015007498csde18979.323ENSCANG00000031069-9478.889Colobus_angolensis_palliatus
ENSSFOG00015007498csde110063.199ENSCGRG00001014011-10063.199Cricetulus_griseus_chok1gshd
ENSSFOG00015007498csde110076.723ENSCGRG00001016833-10076.723Cricetulus_griseus_chok1gshd
ENSSFOG00015007498csde19773.568ENSCGRG00000002225-10074.000Cricetulus_griseus_crigri
ENSSFOG00015007498csde110072.807ENSCGRG00000005831-10072.807Cricetulus_griseus_crigri
ENSSFOG00015007498csde110083.506ENSCSEG00000002620csde110085.714Cynoglossus_semilaevis
ENSSFOG00015007498csde110083.188ENSCVAG00000001344csde110095.238Cyprinodon_variegatus
ENSSFOG00015007498csde110085.536ENSDARG00000074758csde19986.594Danio_rerio
ENSSFOG00015007498csde110077.532ENSDNOG00000010287-9377.532Dasypus_novemcinctus
ENSSFOG00015007498csde18448.675ENSDNOG00000034464-9961.538Dasypus_novemcinctus
ENSSFOG00015007498csde110076.119ENSDORG00000011609Csde110075.871Dipodomys_ordii
ENSSFOG00015007498csde19649.290FBgn0263352Unr7548.992Drosophila_melanogaster
ENSSFOG00015007498csde19959.818ENSETEG00000013678-9959.818Echinops_telfairi
ENSSFOG00015007498csde19378.862ENSETEG00000002491-8571.098Echinops_telfairi
ENSSFOG00015007498csde17954.860ENSETEG00000007109-9954.860Echinops_telfairi
ENSSFOG00015007498csde19068.504ENSETEG00000006280-10068.504Echinops_telfairi
ENSSFOG00015007498csde19955.228ENSEBUG00000008647csde19953.516Eptatretus_burgeri
ENSSFOG00015007498csde110077.243ENSEASG00005006284CSDE110076.493Equus_asinus_asinus
ENSSFOG00015007498csde110077.243ENSECAG00000020885CSDE110076.493Equus_caballus
ENSSFOG00015007498csde19380.312ENSEEUG00000006286CSDE16880.312Erinaceus_europaeus
ENSSFOG00015007498csde19195.238ENSELUG00000015507csde110095.238Esox_lucius
ENSSFOG00015007498csde110077.143ENSFCAG00000029266CSDE110077.113Felis_catus
ENSSFOG00015007498csde110078.856ENSFALG00000003407CSDE110078.607Ficedula_albicollis
ENSSFOG00015007498csde110076.493ENSFDAG00000007882CSDE110076.269Fukomys_damarensis
ENSSFOG00015007498csde110083.354ENSFHEG00000010799csde110083.064Fundulus_heteroclitus
ENSSFOG00015007498csde19983.666ENSGMOG00000012731csde110083.416Gadus_morhua
ENSSFOG00015007498csde19878.707ENSGALG00000002139CSDE19878.454Gallus_gallus
ENSSFOG00015007498csde19483.384ENSGAFG00000005241csde19583.384Gambusia_affinis
ENSSFOG00015007498csde19983.915ENSGACG00000004544csde110083.791Gasterosteus_aculeatus
ENSSFOG00015007498csde110079.351ENSGAGG00000017685CSDE110078.483Gopherus_agassizii
ENSSFOG00015007498csde110076.983ENSGGOG00000002164CSDE110076.983Gorilla_gorilla
ENSSFOG00015007498csde19395.238ENSHBUG00000020315csde110095.238Haplochromis_burtoni
ENSSFOG00015007498csde110069.571ENSHGLG00000003829-10069.571Heterocephalus_glaber_female
ENSSFOG00015007498csde110070.091ENSHGLG00000009620-10070.481Heterocephalus_glaber_female
ENSSFOG00015007498csde19766.300ENSHGLG00000010039-10066.889Heterocephalus_glaber_female
ENSSFOG00015007498csde19966.929ENSHGLG00000007471-9866.929Heterocephalus_glaber_female
ENSSFOG00015007498csde19962.017ENSHGLG00000000650-9961.893Heterocephalus_glaber_female
ENSSFOG00015007498csde19767.761ENSHGLG00000008555-10068.060Heterocephalus_glaber_female
ENSSFOG00015007498csde110064.464ENSHGLG00000019549-10063.466Heterocephalus_glaber_female
ENSSFOG00015007498csde19965.879ENSHGLG00100007287-9865.879Heterocephalus_glaber_male
ENSSFOG00015007498csde19766.079ENSHGLG00100006910-10066.667Heterocephalus_glaber_male
ENSSFOG00015007498csde110077.113ENSHGLG00100019438-10077.113Heterocephalus_glaber_male
ENSSFOG00015007498csde19965.714ENSHGLG00100002245-9965.466Heterocephalus_glaber_male
ENSSFOG00015007498csde110065.410ENSHGLG00100012072-10065.410Heterocephalus_glaber_male
ENSSFOG00015007498csde19364.812ENSHGLG00100004195-10064.812Heterocephalus_glaber_male
ENSSFOG00015007498csde19762.000ENSHGLG00100004833-10062.000Heterocephalus_glaber_male
ENSSFOG00015007498csde110062.857ENSHGLG00100001846-10062.857Heterocephalus_glaber_male
ENSSFOG00015007498csde19390.476ENSHCOG00000004158csde110090.476Hippocampus_comes
ENSSFOG00015007498csde110083.377ENSIPUG00000000355csde110083.377Ictalurus_punctatus
ENSSFOG00015007498csde110064.031ENSSTOG00000030994-10064.031Ictidomys_tridecemlineatus
ENSSFOG00015007498csde18563.636ENSSTOG00000032722-9963.636Ictidomys_tridecemlineatus
ENSSFOG00015007498csde110076.617ENSJJAG00000019571Csde110076.269Jaculus_jaculus
ENSSFOG00015007498csde110082.652ENSKMAG00000005685csde110082.652Kryptolebias_marmoratus
ENSSFOG00015007498csde19395.238ENSLBEG00000014770csde110095.238Labrus_bergylta
ENSSFOG00015007498csde110076.196ENSLACG00000018452CSDE19874.178Latimeria_chalumnae
ENSSFOG00015007498csde110085.910ENSLOCG00000010413csde110083.003Lepisosteus_oculatus
ENSSFOG00015007498csde110076.463ENSLAFG00000007150CSDE19676.463Loxodonta_africana
ENSSFOG00015007498csde110076.983ENSMFAG00000003674CSDE110076.983Macaca_fascicularis
ENSSFOG00015007498csde110076.983ENSMMUG00000001974CSDE110076.983Macaca_mulatta
ENSSFOG00015007498csde110076.983ENSMNEG00000045247CSDE19776.983Macaca_nemestrina
ENSSFOG00015007498csde110076.853ENSMLEG00000038673CSDE19875.449Mandrillus_leucophaeus
ENSSFOG00015007498csde19395.238ENSMAMG00000008821csde110095.238Mastacembelus_armatus
ENSSFOG00015007498csde19395.238ENSMZEG00005021675csde110095.238Maylandia_zebra
ENSSFOG00015007498csde110079.351ENSMGAG00000016381CSDE110079.351Meleagris_gallopavo
ENSSFOG00015007498csde110076.368ENSMAUG00000014031Csde110075.995Mesocricetus_auratus
ENSSFOG00015007498csde110076.723ENSMICG00000002050CSDE19974.388Microcebus_murinus
ENSSFOG00015007498csde110076.723ENSMOCG00000018960Csde110076.723Microtus_ochrogaster
ENSSFOG00015007498csde110084.805ENSMMOG00000015075csde110084.805Mola_mola
ENSSFOG00015007498csde110078.234ENSMODG00000004685CSDE110077.985Monodelphis_domestica
ENSSFOG00015007498csde110084.675ENSMALG00000007132csde110084.675Monopterus_albus
ENSSFOG00015007498csde110076.853MGP_CAROLIEiJ_G0025444Csde110080.132Mus_caroli
ENSSFOG00015007498csde110076.853ENSMUSG00000068823Csde19686.275Mus_musculus
ENSSFOG00015007498csde110076.853MGP_PahariEiJ_G0026888Csde110080.132Mus_pahari
ENSSFOG00015007498csde110076.853MGP_SPRETEiJ_G0026394Csde19786.275Mus_spretus
ENSSFOG00015007498csde19876.650ENSMPUG00000005753CSDE19976.396Mustela_putorius_furo
ENSSFOG00015007498csde110076.883ENSMLUG00000005681CSDE19872.902Myotis_lucifugus
ENSSFOG00015007498csde110076.244ENSNGAG00000021929Csde110075.871Nannospalax_galili
ENSSFOG00015007498csde19752.423ENSNGAG00000012599-10052.889Nannospalax_galili
ENSSFOG00015007498csde110084.805ENSNBRG00000020808csde110084.805Neolamprologus_brichardi
ENSSFOG00015007498csde110076.853ENSNLEG00000004842CSDE19776.853Nomascus_leucogenys
ENSSFOG00015007498csde19281.553ENSMEUG00000002677CSDE19581.553Notamacropus_eugenii
ENSSFOG00015007498csde19878.641ENSOPRG00000005002CSDE17678.641Ochotona_princeps
ENSSFOG00015007498csde110076.493ENSODEG00000007383-10076.418Octodon_degus
ENSSFOG00015007498csde19753.392ENSODEG00000005979-9853.965Octodon_degus
ENSSFOG00015007498csde110082.238ENSONIG00000009309csde110084.352Oreochromis_niloticus
ENSSFOG00015007498csde110081.356ENSOANG00000003346-8381.356Ornithorhynchus_anatinus
ENSSFOG00015007498csde110076.723ENSOCUG00000016438CSDE19875.210Oryctolagus_cuniculus
ENSSFOG00015007498csde110083.896ENSORLG00000000707csde110083.896Oryzias_latipes
ENSSFOG00015007498csde110083.064ENSORLG00020005148csde110090.476Oryzias_latipes_hni
ENSSFOG00015007498csde110083.636ENSORLG00015019415csde110090.476Oryzias_latipes_hsok
ENSSFOG00015007498csde110083.506ENSOMEG00000015656csde110090.476Oryzias_melastigma
ENSSFOG00015007498csde110077.113ENSOGAG00000012127CSDE19477.113Otolemur_garnettii
ENSSFOG00015007498csde110077.013ENSOARG00000020034CSDE19872.989Ovis_aries
ENSSFOG00015007498csde110076.983ENSPPAG00000025861CSDE110076.983Pan_paniscus
ENSSFOG00015007498csde110077.143ENSPPRG00000006747CSDE19875.689Panthera_pardus
ENSSFOG00015007498csde110077.143ENSPTIG00000015468CSDE110076.368Panthera_tigris_altaica
ENSSFOG00015007498csde110076.983ENSPTRG00000033721CSDE110076.244Pan_troglodytes
ENSSFOG00015007498csde110076.983ENSPANG00000018873CSDE110076.983Papio_anubis
ENSSFOG00015007498csde110086.589ENSPKIG00000009459csde110086.589Paramormyrops_kingsleyae
ENSSFOG00015007498csde19681.057ENSPSIG00000003823CSDE19481.069Pelodiscus_sinensis
ENSSFOG00015007498csde110082.361ENSPMGG00000000772csde110082.361Periophthalmus_magnuspinnatus
ENSSFOG00015007498csde110076.617ENSPEMG00000020357-10076.269Peromyscus_maniculatus_bairdii
ENSSFOG00015007498csde110078.234ENSPCIG00000022587CSDE110077.985Phascolarctos_cinereus
ENSSFOG00015007498csde19984.161ENSPFOG00000012664csde110084.161Poecilia_formosa
ENSSFOG00015007498csde19779.908ENSPLAG00000017680csde19379.908Poecilia_latipinna
ENSSFOG00015007498csde19779.908ENSPMEG00000005094csde19579.908Poecilia_mexicana
ENSSFOG00015007498csde110084.060ENSPREG00000011631csde110095.238Poecilia_reticulata
ENSSFOG00015007498csde110076.368ENSPPYG00000000996CSDE110076.119Pongo_abelii
ENSSFOG00015007498csde110079.612ENSPCAG00000014368CSDE19477.251Procavia_capensis
ENSSFOG00015007498csde110076.983ENSPCOG00000017893CSDE110076.983Propithecus_coquereli
ENSSFOG00015007498csde18870.741ENSPCOG00000008223-9270.741Propithecus_coquereli
ENSSFOG00015007498csde110072.172ENSPVAG00000008225CSDE19572.172Pteropus_vampyrus
ENSSFOG00015007498csde110084.807ENSPNYG00000013745csde110084.805Pundamilia_nyererei
ENSSFOG00015007498csde110084.932ENSPNAG00000001958csde110087.755Pygocentrus_nattereri
ENSSFOG00015007498csde110076.368ENSRNOG00000061058Csde110075.995Rattus_norvegicus
ENSSFOG00015007498csde110072.468ENSRBIG00000038966-9871.018Rhinopithecus_bieti
ENSSFOG00015007498csde110073.896ENSRBIG00000038088-10073.896Rhinopithecus_bieti
ENSSFOG00015007498csde110076.983ENSRROG00000043101CSDE19776.983Rhinopithecus_roxellana
ENSSFOG00015007498csde110076.883ENSSBOG00000035592CSDE19875.449Saimiri_boliviensis_boliviensis
ENSSFOG00015007498csde110078.674ENSSHAG00000009831CSDE110078.674Sarcophilus_harrisii
ENSSFOG00015007498csde19392.857ENSSMAG00000007203csde110092.857Scophthalmus_maximus
ENSSFOG00015007498csde19395.238ENSSDUG00000015380csde110095.238Seriola_dumerili
ENSSFOG00015007498csde110085.325ENSSLDG00000008819csde110085.325Seriola_lalandi_dorsalis
ENSSFOG00015007498csde110076.983ENSSARG00000000738CSDE19476.983Sorex_araneus
ENSSFOG00015007498csde110079.714ENSSPUG00000008714CSDE110079.714Sphenodon_punctatus
ENSSFOG00015007498csde110085.844ENSSPAG00000000716csde110095.238Stegastes_partitus
ENSSFOG00015007498csde110077.243ENSSSCG00000006752CSDE110077.243Sus_scrofa
ENSSFOG00015007498csde110077.916ENSTGUG00000000972CSDE110077.667Taeniopygia_guttata
ENSSFOG00015007498csde110080.494ENSTRUG00000007996csde110080.494Takifugu_rubripes
ENSSFOG00015007498csde19385.214ENSTNIG00000010878csde110085.214Tetraodon_nigroviridis
ENSSFOG00015007498csde19381.250ENSTBEG00000011880-6581.250Tupaia_belangeri
ENSSFOG00015007498csde110076.723ENSTTRG00000015583CSDE19872.749Tursiops_truncatus
ENSSFOG00015007498csde18972.552ENSUAMG00000024289-9972.552Ursus_americanus
ENSSFOG00015007498csde19282.838ENSUAMG00000021779-9882.410Ursus_americanus
ENSSFOG00015007498csde19772.535ENSUMAG00000011714-9973.223Ursus_maritimus
ENSSFOG00015007498csde110070.741ENSUMAG00000009720-9770.741Ursus_maritimus
ENSSFOG00015007498csde110079.814ENSVPAG00000000749CSDE17979.814Vicugna_pacos
ENSSFOG00015007498csde19375.362ENSVVUG00000009890CSDE19475.072Vulpes_vulpes
ENSSFOG00015007498csde110077.228ENSXETG00000021448csde110076.980Xenopus_tropicalis
ENSSFOG00015007498csde19485.217ENSXCOG00000000035csde18985.217Xiphophorus_couchianus
ENSSFOG00015007498csde110084.184ENSXMAG00000009080csde110092.857Xiphophorus_maculatus

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