EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015007701 (Gene tree)
Gene ID: 108942100
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 4-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6053 bases
Position: chrKV411245.1:9289040-9295092
Accession: 108942100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015011927	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015012080	-	2077	XM_018765190	ENSSFOP00015011927	180 (aa)	XP_018620706	A0A1W5AZ66
ENSSFOT00015012093	-	2005	-	ENSSFOP00015011940	156 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015007701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015007701	-	94	31.720	ENSSFOG00015014010	sar1a	92	31.720
ENSSFOG00015007701	-	69	32.090	ENSSFOG00015020836	rab1ba	64	32.090
ENSSFOG00015007701	-	91	42.331	ENSSFOG00015022345	-	87	42.331
ENSSFOG00015007701	-	69	30.597	ENSSFOG00015005464	zgc:171927	60	30.597
ENSSFOG00015007701	-	84	39.490	ENSSFOG00015015390	ARL4A	78	39.490
ENSSFOG00015007701	-	98	44.633	ENSSFOG00015023529	arl5c	98	44.633
ENSSFOG00015007701	-	100	53.889	ENSSFOG00015001665	arl1	99	53.889
ENSSFOG00015007701	-	92	44.118	ENSSFOG00015020603	arl4aa	85	44.118
ENSSFOG00015007701	-	96	30.526	ENSSFOG00015005491	arl13b	74	30.526
ENSSFOG00015007701	-	92	46.784	ENSSFOG00015018615	ARL4C	87	46.784
ENSSFOG00015007701	-	100	73.333	ENSSFOG00015004387	-	99	73.333
ENSSFOG00015007701	-	94	30.108	ENSSFOG00015018128	-	92	30.108
ENSSFOG00015007701	-	72	31.884	ENSSFOG00015019355	srprb	54	31.034
ENSSFOG00015007701	-	100	45.556	ENSSFOG00015005606	arl5a	100	45.556
ENSSFOG00015007701	-	94	43.860	ENSSFOG00015001190	arl11	95	43.860
ENSSFOG00015007701	-	100	46.111	ENSSFOG00015021226	arl5a	100	46.111
ENSSFOG00015007701	-	78	36.806	ENSSFOG00015019411	arl8ba	77	36.806
ENSSFOG00015007701	-	92	43.030	ENSSFOG00015015338	-	91	43.030
ENSSFOG00015007701	-	74	33.582	ENSSFOG00015021537	arl8a	72	33.582
ENSSFOG00015007701	-	100	84.444	ENSSFOG00015020707	ARF5	100	84.444
ENSSFOG00015007701	-	100	72.778	ENSSFOG00015015116	arf3	99	72.778
ENSSFOG00015007701	-	88	41.358	ENSSFOG00015004083	arl6	84	41.718
ENSSFOG00015007701	-	91	41.317	ENSSFOG00015023135	arl6	90	41.317
ENSSFOG00015007701	-	96	44.693	ENSSFOG00015007064	arl4cb	90	44.693
ENSSFOG00015007701	-	94	30.645	ENSSFOG00015020051	sar1b	92	30.645
ENSSFOG00015007701	-	95	40.462	ENSSFOG00015014993	-	93	40.462
ENSSFOG00015007701	-	91	34.545	ENSSFOG00015008219	arl2	87	38.182
ENSSFOG00015007701	-	100	45.000	ENSSFOG00015002122	arl5b	100	45.000
ENSSFOG00015007701	-	88	35.714	ENSSFOG00015023057	arl13b	66	35.714
ENSSFOG00015007701	-	69	31.343	ENSSFOG00015011140	-	62	31.343
ENSSFOG00015007701	-	98	74.576	ENSSFOG00015009538	arf1	98	74.576
ENSSFOG00015007701	-	94	34.973	ENSSFOG00015020500	arfrp1	89	34.973
ENSSFOG00015007701	-	78	37.500	ENSSFOG00015020131	arl8bb	82	37.500
ENSSFOG00015007701	-	100	73.333	ENSSFOG00015021396	-	99	73.333
ENSSFOG00015007701	-	69	32.090	ENSSFOG00015001293	rab1ab	63	32.090
ENSSFOG00015007701	-	100	72.778	ENSSFOG00015004822	arf3a	99	72.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007701	-	100	80.000	ENSG00000004059	ARF5	100	80.000	Homo_sapiens
ENSSFOG00015007701	-	99	79.888	ENSAPOG00000000667	-	99	79.888	Acanthochromis_polyacanthus
ENSSFOG00015007701	-	100	80.000	ENSAMEG00000004635	ARF5	100	80.000	Ailuropoda_melanoleuca
ENSSFOG00015007701	-	100	83.333	ENSACIG00000005843	arf5	100	83.333	Amphilophus_citrinellus
ENSSFOG00015007701	-	100	67.582	ENSACIG00000014610	zgc:110286	100	67.582	Amphilophus_citrinellus
ENSSFOG00015007701	-	99	81.564	ENSACIG00000000467	-	99	81.564	Amphilophus_citrinellus
ENSSFOG00015007701	-	99	83.799	ENSAOCG00000023329	arf5	99	83.799	Amphiprion_ocellaris
ENSSFOG00015007701	-	99	78.771	ENSAOCG00000008113	-	99	78.771	Amphiprion_ocellaris
ENSSFOG00015007701	-	99	83.799	ENSAPEG00000024614	arf5	99	83.799	Amphiprion_percula
ENSSFOG00015007701	-	99	78.771	ENSAPEG00000003087	-	99	78.771	Amphiprion_percula
ENSSFOG00015007701	-	99	81.564	ENSATEG00000001302	-	99	81.564	Anabas_testudineus
ENSSFOG00015007701	-	100	83.889	ENSATEG00000003053	ARF5	100	83.889	Anabas_testudineus
ENSSFOG00015007701	-	100	80.000	ENSANAG00000026446	ARF5	100	80.000	Aotus_nancymaae
ENSSFOG00015007701	-	99	81.564	ENSACLG00000025604	-	99	81.564	Astatotilapia_calliptera
ENSSFOG00015007701	-	100	83.889	ENSACLG00000005705	arf5	100	83.889	Astatotilapia_calliptera
ENSSFOG00015007701	-	100	80.000	ENSAMXG00000031467	arf4a	100	80.000	Astyanax_mexicanus
ENSSFOG00015007701	-	100	82.778	ENSAMXG00000004249	-	100	82.778	Astyanax_mexicanus
ENSSFOG00015007701	-	100	82.222	ENSAMXG00000038224	-	100	82.222	Astyanax_mexicanus
ENSSFOG00015007701	-	100	83.889	ENSAMXG00000031774	ARF5	100	83.889	Astyanax_mexicanus
ENSSFOG00015007701	-	100	80.000	ENSBTAG00000009366	ARF5	100	80.000	Bos_taurus
ENSSFOG00015007701	-	99	79.888	WBGene00000183	arf-3	99	79.888	Caenorhabditis_elegans
ENSSFOG00015007701	-	100	80.000	ENSCJAG00000017604	ARF5	100	80.000	Callithrix_jacchus
ENSSFOG00015007701	-	100	67.290	ENSCAFG00020021629	ARF5	100	67.290	Canis_lupus_dingo
ENSSFOG00015007701	-	100	80.000	ENSCHIG00000018906	ARF5	100	80.000	Capra_hircus
ENSSFOG00015007701	-	100	77.901	ENSCPOG00000006239	ARF5	100	77.901	Cavia_porcellus
ENSSFOG00015007701	-	100	80.000	ENSCCAG00000027943	-	100	80.000	Cebus_capucinus
ENSSFOG00015007701	-	100	80.000	ENSCATG00000010217	ARF5	100	80.000	Cercocebus_atys
ENSSFOG00015007701	-	100	80.000	ENSCLAG00000007930	ARF5	100	80.000	Chinchilla_lanigera
ENSSFOG00015007701	-	100	80.000	ENSCSAG00000010208	ARF5	100	80.000	Chlorocebus_sabaeus
ENSSFOG00015007701	-	99	70.950	ENSCING00000004846	-	99	70.950	Ciona_intestinalis
ENSSFOG00015007701	-	99	70.166	ENSCSAVG00000001959	-	99	70.166	Ciona_savignyi
ENSSFOG00015007701	-	89	80.124	ENSCANG00000037234	ARF5	98	80.124	Colobus_angolensis_palliatus
ENSSFOG00015007701	-	100	80.000	ENSCGRG00001024919	Arf5	100	80.000	Cricetulus_griseus_chok1gshd
ENSSFOG00015007701	-	100	77.222	ENSCSEG00000006004	arf5	100	77.222	Cynoglossus_semilaevis
ENSSFOG00015007701	-	99	81.006	ENSCVAG00000011381	-	99	81.006	Cyprinodon_variegatus
ENSSFOG00015007701	-	100	83.889	ENSCVAG00000009124	ARF5	100	83.889	Cyprinodon_variegatus
ENSSFOG00015007701	-	100	83.889	ENSCVAG00000007314	-	100	83.889	Cyprinodon_variegatus
ENSSFOG00015007701	-	100	82.778	ENSDARG00000070472	arf5	100	82.778	Danio_rerio
ENSSFOG00015007701	-	100	80.000	ENSDARG00000045989	arf4a	100	80.000	Danio_rerio
ENSSFOG00015007701	-	100	67.403	ENSDARG00000074210	ARF5	89	67.403	Danio_rerio
ENSSFOG00015007701	-	100	83.333	ENSDARG00000113899	zgc:77650	100	83.333	Danio_rerio
ENSSFOG00015007701	-	100	80.000	ENSDORG00000000325	Arf5	100	80.000	Dipodomys_ordii
ENSSFOG00015007701	-	100	78.889	FBgn0013749	Arf102F	100	78.889	Drosophila_melanogaster
ENSSFOG00015007701	-	97	78.286	ENSETEG00000009275	ARF5	100	78.286	Echinops_telfairi
ENSSFOG00015007701	-	100	76.667	ENSEBUG00000014420	-	100	76.667	Eptatretus_burgeri
ENSSFOG00015007701	-	99	65.363	ENSEBUG00000004484	-	99	65.363	Eptatretus_burgeri
ENSSFOG00015007701	-	99	70.391	ENSELUG00000014428	arf4	99	70.391	Esox_lucius
ENSSFOG00015007701	-	100	80.000	ENSFCAG00000005482	ARF5	100	80.000	Felis_catus
ENSSFOG00015007701	-	100	83.333	ENSFHEG00000023119	arf5	100	83.333	Fundulus_heteroclitus
ENSSFOG00015007701	-	100	81.667	ENSGMOG00000019109	-	99	81.667	Gadus_morhua
ENSSFOG00015007701	-	100	79.444	ENSGMOG00000008747	arf5	100	79.444	Gadus_morhua
ENSSFOG00015007701	-	100	83.889	ENSGAFG00000018703	arf5	100	83.889	Gambusia_affinis
ENSSFOG00015007701	-	99	79.888	ENSGAFG00000005163	-	99	79.888	Gambusia_affinis
ENSSFOG00015007701	-	100	82.222	ENSGACG00000000686	arf5	100	82.222	Gasterosteus_aculeatus
ENSSFOG00015007701	-	99	77.654	ENSGACG00000012500	-	99	77.654	Gasterosteus_aculeatus
ENSSFOG00015007701	-	100	79.444	ENSGAGG00000000231	ARF5	100	79.444	Gopherus_agassizii
ENSSFOG00015007701	-	100	80.000	ENSGGOG00000016749	ARF5	100	80.000	Gorilla_gorilla
ENSSFOG00015007701	-	100	83.889	ENSHBUG00000008546	arf5	100	83.889	Haplochromis_burtoni
ENSSFOG00015007701	-	99	81.564	ENSHBUG00000011041	-	99	81.564	Haplochromis_burtoni
ENSSFOG00015007701	-	100	80.000	ENSHGLG00000007494	ARF5	100	80.000	Heterocephalus_glaber_female
ENSSFOG00015007701	-	100	79.444	ENSHGLG00100006040	ARF5	60	79.444	Heterocephalus_glaber_male
ENSSFOG00015007701	-	99	77.095	ENSHCOG00000015577	-	100	77.095	Hippocampus_comes
ENSSFOG00015007701	-	100	70.556	ENSIPUG00000006913	-	70	70.556	Ictalurus_punctatus
ENSSFOG00015007701	-	100	81.111	ENSIPUG00000007016	arf4	100	81.111	Ictalurus_punctatus
ENSSFOG00015007701	-	100	80.556	ENSIPUG00000004215	arf5	100	80.556	Ictalurus_punctatus
ENSSFOG00015007701	-	100	81.667	ENSIPUG00000004159	Arf5	100	81.667	Ictalurus_punctatus
ENSSFOG00015007701	-	100	80.000	ENSSTOG00000002104	ARF5	100	80.000	Ictidomys_tridecemlineatus
ENSSFOG00015007701	-	100	80.000	ENSJJAG00000005105	Arf5	100	80.000	Jaculus_jaculus
ENSSFOG00015007701	-	99	80.447	ENSKMAG00000012816	-	99	80.447	Kryptolebias_marmoratus
ENSSFOG00015007701	-	100	76.667	ENSLBEG00000012002	-	99	76.667	Labrus_bergylta
ENSSFOG00015007701	-	100	81.667	ENSLBEG00000026532	arf5	100	81.667	Labrus_bergylta
ENSSFOG00015007701	-	100	80.000	ENSLAFG00000011469	ARF5	100	80.000	Loxodonta_africana
ENSSFOG00015007701	-	100	80.000	ENSMFAG00000019772	ARF5	100	80.000	Macaca_fascicularis
ENSSFOG00015007701	-	100	80.000	ENSMMUG00000046381	ARF5	100	80.000	Macaca_mulatta
ENSSFOG00015007701	-	100	80.000	ENSMNEG00000040893	ARF5	100	80.000	Macaca_nemestrina
ENSSFOG00015007701	-	99	82.123	ENSMAMG00000008223	-	99	82.123	Mastacembelus_armatus
ENSSFOG00015007701	-	100	83.889	ENSMAMG00000021160	arf5	100	83.889	Mastacembelus_armatus
ENSSFOG00015007701	-	87	83.439	ENSMZEG00005019741	-	93	83.439	Maylandia_zebra
ENSSFOG00015007701	-	100	83.889	ENSMZEG00005015033	arf5	67	83.889	Maylandia_zebra
ENSSFOG00015007701	-	100	80.000	ENSMAUG00000014825	Arf5	100	80.000	Mesocricetus_auratus
ENSSFOG00015007701	-	100	80.000	ENSMICG00000000091	ARF5	100	80.000	Microcebus_murinus
ENSSFOG00015007701	-	100	80.000	ENSMOCG00000022861	Arf5	100	80.000	Microtus_ochrogaster
ENSSFOG00015007701	-	100	80.000	ENSMODG00000015229	ARF5	100	80.000	Monodelphis_domestica
ENSSFOG00015007701	-	99	82.123	ENSMALG00000006020	-	99	82.123	Monopterus_albus
ENSSFOG00015007701	-	99	68.156	ENSMALG00000022638	zgc:110286	100	68.156	Monopterus_albus
ENSSFOG00015007701	-	100	83.889	ENSMALG00000010117	-	100	83.889	Monopterus_albus
ENSSFOG00015007701	-	100	80.000	MGP_CAROLIEiJ_G0028156	Arf5	100	80.000	Mus_caroli
ENSSFOG00015007701	-	100	80.000	ENSMUSG00000020440	Arf5	100	80.000	Mus_musculus
ENSSFOG00015007701	-	100	80.000	MGP_PahariEiJ_G0021914	Arf5	100	80.000	Mus_pahari
ENSSFOG00015007701	-	100	80.000	MGP_SPRETEiJ_G0029156	Arf5	100	80.000	Mus_spretus
ENSSFOG00015007701	-	100	80.000	ENSMPUG00000006675	ARF5	100	80.000	Mustela_putorius_furo
ENSSFOG00015007701	-	100	80.000	ENSMLUG00000017122	ARF5	100	80.000	Myotis_lucifugus
ENSSFOG00015007701	-	100	80.000	ENSNGAG00000011743	Arf5	100	80.000	Nannospalax_galili
ENSSFOG00015007701	-	100	83.889	ENSNBRG00000018854	arf5	100	83.889	Neolamprologus_brichardi
ENSSFOG00015007701	-	100	80.000	ENSODEG00000011800	ARF5	100	80.000	Octodon_degus
ENSSFOG00015007701	-	100	83.889	ENSONIG00000007594	arf5	100	83.889	Oreochromis_niloticus
ENSSFOG00015007701	-	99	81.564	ENSONIG00000014890	-	99	81.564	Oreochromis_niloticus
ENSSFOG00015007701	-	100	80.000	ENSOCUG00000024365	ARF5	100	80.000	Oryctolagus_cuniculus
ENSSFOG00015007701	-	99	81.564	ENSORLG00020001755	-	99	81.564	Oryzias_latipes_hni
ENSSFOG00015007701	-	100	83.889	ENSOMEG00000020821	ARF5	100	83.889	Oryzias_melastigma
ENSSFOG00015007701	-	99	81.006	ENSOMEG00000000211	-	64	81.006	Oryzias_melastigma
ENSSFOG00015007701	-	100	80.000	ENSOGAG00000013336	ARF5	100	80.000	Otolemur_garnettii
ENSSFOG00015007701	-	100	80.000	ENSPPAG00000037755	ARF5	100	80.000	Pan_paniscus
ENSSFOG00015007701	-	100	80.000	ENSPPRG00000004674	ARF5	100	80.000	Panthera_pardus
ENSSFOG00015007701	-	100	80.000	ENSPTRG00000019651	ARF5	100	80.000	Pan_troglodytes
ENSSFOG00015007701	-	100	80.000	ENSPANG00000032970	ARF5	100	80.000	Papio_anubis
ENSSFOG00015007701	-	100	80.556	ENSPKIG00000025349	arf4a	100	80.556	Paramormyrops_kingsleyae
ENSSFOG00015007701	-	99	85.475	ENSPKIG00000013814	-	99	85.475	Paramormyrops_kingsleyae
ENSSFOG00015007701	-	100	82.778	ENSPKIG00000025381	-	100	82.778	Paramormyrops_kingsleyae
ENSSFOG00015007701	-	100	81.111	ENSPMGG00000009985	-	100	81.111	Periophthalmus_magnuspinnatus
ENSSFOG00015007701	-	100	80.000	ENSPEMG00000021476	Arf5	100	80.000	Peromyscus_maniculatus_bairdii
ENSSFOG00015007701	-	99	73.184	ENSPMAG00000009600	arf4a	100	73.184	Petromyzon_marinus
ENSSFOG00015007701	-	100	83.889	ENSPFOG00000015817	arf5	100	83.889	Poecilia_formosa
ENSSFOG00015007701	-	99	79.444	ENSPFOG00000017992	-	99	79.444	Poecilia_formosa
ENSSFOG00015007701	-	99	79.888	ENSPLAG00000015630	-	99	79.888	Poecilia_latipinna
ENSSFOG00015007701	-	100	83.889	ENSPLAG00000006742	arf5	100	83.889	Poecilia_latipinna
ENSSFOG00015007701	-	99	79.888	ENSPMEG00000004624	-	99	79.888	Poecilia_mexicana
ENSSFOG00015007701	-	100	83.889	ENSPMEG00000009605	arf5	100	83.889	Poecilia_mexicana
ENSSFOG00015007701	-	100	80.000	ENSPCOG00000027640	ARF5	100	80.000	Propithecus_coquereli
ENSSFOG00015007701	-	100	80.000	ENSPVAG00000013940	ARF5	100	80.000	Pteropus_vampyrus
ENSSFOG00015007701	-	99	81.564	ENSPNYG00000004931	-	99	81.564	Pundamilia_nyererei
ENSSFOG00015007701	-	100	83.889	ENSPNYG00000001663	arf5	100	83.889	Pundamilia_nyererei
ENSSFOG00015007701	-	100	69.444	ENSPNAG00000005054	-	100	69.444	Pygocentrus_nattereri
ENSSFOG00015007701	-	100	67.222	ENSPNAG00000004475	-	100	67.222	Pygocentrus_nattereri
ENSSFOG00015007701	-	100	82.778	ENSPNAG00000024427	-	100	82.778	Pygocentrus_nattereri
ENSSFOG00015007701	-	100	80.000	ENSPNAG00000004745	arf4a	100	80.000	Pygocentrus_nattereri
ENSSFOG00015007701	-	100	80.000	ENSRNOG00000007806	Arf5	100	80.000	Rattus_norvegicus
ENSSFOG00015007701	-	100	80.000	ENSRBIG00000039868	ARF5	100	80.000	Rhinopithecus_bieti
ENSSFOG00015007701	-	100	80.000	ENSRROG00000041157	ARF5	100	80.000	Rhinopithecus_roxellana
ENSSFOG00015007701	-	100	80.000	ENSSBOG00000021669	ARF5	100	80.000	Saimiri_boliviensis_boliviensis
ENSSFOG00015007701	-	100	80.000	ENSSHAG00000015053	ARF5	100	80.000	Sarcophilus_harrisii
ENSSFOG00015007701	-	100	83.889	ENSSMAG00000011361	arf5	100	83.889	Scophthalmus_maximus
ENSSFOG00015007701	-	99	78.771	ENSSMAG00000004541	-	99	78.771	Scophthalmus_maximus
ENSSFOG00015007701	-	100	84.444	ENSSDUG00000005105	arf5	100	84.444	Seriola_dumerili
ENSSFOG00015007701	-	100	84.444	ENSSLDG00000017188	arf5	100	84.444	Seriola_lalandi_dorsalis
ENSSFOG00015007701	-	99	79.330	ENSSPAG00000022680	-	99	79.330	Stegastes_partitus
ENSSFOG00015007701	-	100	82.778	ENSSPAG00000014434	arf5	100	82.778	Stegastes_partitus
ENSSFOG00015007701	-	100	80.000	ENSSSCG00000016593	ARF5	100	80.000	Sus_scrofa
ENSSFOG00015007701	-	99	77.095	ENSTRUG00000025462	-	100	77.095	Takifugu_rubripes
ENSSFOG00015007701	-	99	81.564	ENSTNIG00000003348	arf5	100	81.564	Tetraodon_nigroviridis
ENSSFOG00015007701	-	99	76.536	ENSTNIG00000017954	-	100	76.536	Tetraodon_nigroviridis
ENSSFOG00015007701	-	90	81.481	ENSTTRG00000006043	ARF5	100	81.481	Tursiops_truncatus
ENSSFOG00015007701	-	100	80.000	ENSUAMG00000012982	ARF5	100	80.000	Ursus_americanus
ENSSFOG00015007701	-	100	80.000	ENSVVUG00000007062	ARF5	100	80.000	Vulpes_vulpes
ENSSFOG00015007701	-	99	79.888	ENSXCOG00000020384	-	99	79.888	Xiphophorus_couchianus
ENSSFOG00015007701	-	99	79.888	ENSXMAG00000004558	-	99	79.888	Xiphophorus_maculatus
ENSSFOG00015007701	-	100	83.889	ENSXMAG00000015306	arf5	100	83.889	Xiphophorus_maculatus