EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015007850 (Gene tree)
Gene ID: 108936679
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 8776 bases
Position: chrKV411122.1:207757-216532
Accession: 108936679
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015012210	B3_4	PF03483.17	7.7e-25	1	1
ENSSFOP00015012191	B3_4	PF03483.17	8.2e-25	1	1
ENSSFOP00015012191	B5	PF03484.15	4.4e-17	1	1
ENSSFOP00015012210	B5	PF03484.15	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015012364	-	1731	-	ENSSFOP00015012210	576 (aa)	-	-
ENSSFOT00015012345	-	2647	XM_018756189	ENSSFOP00015012191	586 (aa)	XP_018611705	A0A1W5AFA2

Gene Model

Click here to download ENSSFOG00015007850's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015007850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015007850	farsb	100	74.873	ENSG00000116120	FARSB	100	74.873	Homo_sapiens
ENSSFOG00015007850	farsb	100	80.985	ENSAPOG00000013072	farsb	100	76.231	Acanthochromis_polyacanthus
ENSSFOG00015007850	farsb	100	74.873	ENSAMEG00000005984	FARSB	100	74.873	Ailuropoda_melanoleuca
ENSSFOG00015007850	farsb	100	77.589	ENSACIG00000021623	farsb	100	77.589	Amphilophus_citrinellus
ENSSFOG00015007850	farsb	100	80.645	ENSAOCG00000004912	farsb	100	77.250	Amphiprion_ocellaris
ENSSFOG00015007850	farsb	100	80.475	ENSAPEG00000001153	farsb	100	75.722	Amphiprion_percula
ENSSFOG00015007850	farsb	100	82.003	ENSATEG00000021441	farsb	70	82.003	Anabas_testudineus
ENSSFOG00015007850	farsb	99	73.413	ENSAPLG00000010292	FARSB	99	73.413	Anas_platyrhynchos
ENSSFOG00015007850	farsb	100	74.194	ENSACAG00000004769	FARSB	98	74.194	Anolis_carolinensis
ENSSFOG00015007850	farsb	100	74.873	ENSANAG00000024637	FARSB	100	74.873	Aotus_nancymaae
ENSSFOG00015007850	farsb	100	81.324	ENSACLG00000013951	farsb	100	79.787	Astatotilapia_calliptera
ENSSFOG00015007850	farsb	86	80.847	ENSAMXG00000033881	farsb	99	80.847	Astyanax_mexicanus
ENSSFOG00015007850	farsb	96	74.291	ENSBTAG00000045523	-	100	74.291	Bos_taurus
ENSSFOG00015007850	farsb	100	75.042	ENSBTAG00000011649	FARSB	100	75.042	Bos_taurus
ENSSFOG00015007850	farsb	100	56.176	WBGene00001498	fars-3	100	56.176	Caenorhabditis_elegans
ENSSFOG00015007850	farsb	100	75.042	ENSCJAG00000012181	FARSB	100	75.042	Callithrix_jacchus
ENSSFOG00015007850	farsb	100	75.042	ENSCAFG00000016094	-	100	75.042	Canis_familiaris
ENSSFOG00015007850	farsb	100	72.572	ENSCAFG00020026684	FARSB	100	74.600	Canis_lupus_dingo
ENSSFOG00015007850	farsb	100	75.382	ENSCHIG00000014275	FARSB	100	75.382	Capra_hircus
ENSSFOG00015007850	farsb	100	75.382	ENSTSYG00000008461	FARSB	100	75.382	Carlito_syrichta
ENSSFOG00015007850	farsb	95	70.125	ENSCAPG00000016436	FARSB	98	70.125	Cavia_aperea
ENSSFOG00015007850	farsb	100	75.382	ENSCPOG00000013109	FARSB	100	75.382	Cavia_porcellus
ENSSFOG00015007850	farsb	100	70.798	ENSCCAG00000025840	FARSB	100	70.798	Cebus_capucinus
ENSSFOG00015007850	farsb	100	74.703	ENSCATG00000036168	FARSB	100	74.703	Cercocebus_atys
ENSSFOG00015007850	farsb	100	74.703	ENSCLAG00000011954	FARSB	100	74.703	Chinchilla_lanigera
ENSSFOG00015007850	farsb	100	74.703	ENSCSAG00000007806	FARSB	100	74.703	Chlorocebus_sabaeus
ENSSFOG00015007850	farsb	81	86.517	ENSCHOG00000011785	FARSB	81	86.517	Choloepus_hoffmanni
ENSSFOG00015007850	farsb	100	75.212	ENSCPBG00000019346	FARSB	98	75.212	Chrysemys_picta_bellii
ENSSFOG00015007850	farsb	99	59.365	ENSCING00000004180	-	99	59.365	Ciona_intestinalis
ENSSFOG00015007850	farsb	99	60.702	ENSCSAVG00000005346	-	99	60.702	Ciona_savignyi
ENSSFOG00015007850	farsb	97	74.165	ENSCANG00000036239	FARSB	100	74.165	Colobus_angolensis_palliatus
ENSSFOG00015007850	farsb	100	75.552	ENSCGRG00001022928	Farsb	100	75.552	Cricetulus_griseus_chok1gshd
ENSSFOG00015007850	farsb	100	75.552	ENSCGRG00000001513	Farsb	100	75.552	Cricetulus_griseus_crigri
ENSSFOG00015007850	farsb	100	80.306	ENSCSEG00000005415	farsb	95	80.306	Cynoglossus_semilaevis
ENSSFOG00015007850	farsb	76	78.348	ENSCVAG00000018815	farsb	98	78.348	Cyprinodon_variegatus
ENSSFOG00015007850	farsb	100	81.525	ENSDARG00000016864	farsb	100	81.525	Danio_rerio
ENSSFOG00015007850	farsb	100	73.345	ENSDNOG00000002511	FARSB	100	73.345	Dasypus_novemcinctus
ENSSFOG00015007850	farsb	100	75.042	ENSDORG00000011102	Farsb	100	75.042	Dipodomys_ordii
ENSSFOG00015007850	farsb	100	61.186	FBgn0039175	beta-PheRS	100	61.186	Drosophila_melanogaster
ENSSFOG00015007850	farsb	97	72.232	ENSETEG00000015080	FARSB	100	72.232	Echinops_telfairi
ENSSFOG00015007850	farsb	100	63.559	ENSEBUG00000006846	farsb	100	63.559	Eptatretus_burgeri
ENSSFOG00015007850	farsb	100	75.042	ENSEASG00005011297	FARSB	100	75.042	Equus_asinus_asinus
ENSSFOG00015007850	farsb	100	72.459	ENSECAG00000023086	FARSB	98	75.741	Equus_caballus
ENSSFOG00015007850	farsb	91	68.085	ENSEEUG00000007441	FARSB	91	68.085	Erinaceus_europaeus
ENSSFOG00015007850	farsb	97	83.363	ENSELUG00000014767	farsb	99	83.363	Esox_lucius
ENSSFOG00015007850	farsb	100	75.722	ENSFCAG00000026772	FARSB	100	75.722	Felis_catus
ENSSFOG00015007850	farsb	98	73.611	ENSFALG00000006739	FARSB	98	73.611	Ficedula_albicollis
ENSSFOG00015007850	farsb	100	75.212	ENSFDAG00000008871	FARSB	100	75.212	Fukomys_damarensis
ENSSFOG00015007850	farsb	100	80.815	ENSFHEG00000020939	farsb	98	80.926	Fundulus_heteroclitus
ENSSFOG00015007850	farsb	91	78.625	ENSGMOG00000013047	farsb	99	78.625	Gadus_morhua
ENSSFOG00015007850	farsb	100	74.024	ENSGALG00000005236	FARSB	100	74.024	Gallus_gallus
ENSSFOG00015007850	farsb	100	79.287	ENSGAFG00000020900	farsb	100	68.421	Gambusia_affinis
ENSSFOG00015007850	farsb	91	80.855	ENSGACG00000000261	farsb	99	80.855	Gasterosteus_aculeatus
ENSSFOG00015007850	farsb	100	75.042	ENSGAGG00000016575	FARSB	98	75.042	Gopherus_agassizii
ENSSFOG00015007850	farsb	100	81.494	ENSHBUG00000022379	farsb	100	78.947	Haplochromis_burtoni
ENSSFOG00015007850	farsb	100	75.382	ENSHGLG00000015965	FARSB	100	75.382	Heterocephalus_glaber_female
ENSSFOG00015007850	farsb	100	75.382	ENSHGLG00100001035	FARSB	100	75.382	Heterocephalus_glaber_male
ENSSFOG00015007850	farsb	93	73.084	ENSHCOG00000016462	farsb	100	73.084	Hippocampus_comes
ENSSFOG00015007850	farsb	100	81.494	ENSIPUG00000002754	farsb	100	81.494	Ictalurus_punctatus
ENSSFOG00015007850	farsb	100	75.042	ENSSTOG00000016169	FARSB	100	75.042	Ictidomys_tridecemlineatus
ENSSFOG00015007850	farsb	100	74.873	ENSJJAG00000003267	Farsb	100	74.873	Jaculus_jaculus
ENSSFOG00015007850	farsb	100	72.344	ENSKMAG00000005363	farsb	100	72.344	Kryptolebias_marmoratus
ENSSFOG00015007850	farsb	100	80.475	ENSLBEG00000018127	farsb	70	80.475	Labrus_bergylta
ENSSFOG00015007850	farsb	100	77.683	ENSLACG00000002551	FARSB	100	78.479	Latimeria_chalumnae
ENSSFOG00015007850	farsb	100	81.293	ENSLOCG00000004136	farsb	100	81.293	Lepisosteus_oculatus
ENSSFOG00015007850	farsb	100	74.024	ENSLAFG00000015659	FARSB	100	74.024	Loxodonta_africana
ENSSFOG00015007850	farsb	100	74.533	ENSMFAG00000036645	FARSB	100	74.533	Macaca_fascicularis
ENSSFOG00015007850	farsb	100	71.986	ENSMMUG00000007685	FARSB	100	71.986	Macaca_mulatta
ENSSFOG00015007850	farsb	100	74.363	ENSMNEG00000030672	FARSB	100	74.363	Macaca_nemestrina
ENSSFOG00015007850	farsb	100	74.703	ENSMLEG00000042060	FARSB	100	74.703	Mandrillus_leucophaeus
ENSSFOG00015007850	farsb	100	82.852	ENSMAMG00000011835	farsb	100	76.061	Mastacembelus_armatus
ENSSFOG00015007850	farsb	96	79.751	ENSMZEG00005004544	farsb	100	79.751	Maylandia_zebra
ENSSFOG00015007850	farsb	95	73.524	ENSMGAG00000004670	FARSB	100	73.524	Meleagris_gallopavo
ENSSFOG00015007850	farsb	72	75.862	ENSMAUG00000017805	Farsb	99	75.862	Mesocricetus_auratus
ENSSFOG00015007850	farsb	100	75.891	ENSMICG00000002495	FARSB	100	75.891	Microcebus_murinus
ENSSFOG00015007850	farsb	100	75.340	ENSMOCG00000003181	Farsb	100	75.340	Microtus_ochrogaster
ENSSFOG00015007850	farsb	100	73.854	ENSMMOG00000006265	farsb	100	73.854	Mola_mola
ENSSFOG00015007850	farsb	100	76.401	ENSMODG00000021192	FARSB	100	76.401	Monodelphis_domestica
ENSSFOG00015007850	farsb	94	81.851	ENSMALG00000021188	farsb	92	81.851	Monopterus_albus
ENSSFOG00015007850	farsb	100	75.891	MGP_CAROLIEiJ_G0014310	Farsb	100	75.891	Mus_caroli
ENSSFOG00015007850	farsb	100	75.552	ENSMUSG00000026245	Farsb	100	75.552	Mus_musculus
ENSSFOG00015007850	farsb	100	75.552	MGP_PahariEiJ_G0027548	Farsb	100	75.552	Mus_pahari
ENSSFOG00015007850	farsb	100	75.552	MGP_SPRETEiJ_G0015116	Farsb	100	75.552	Mus_spretus
ENSSFOG00015007850	farsb	100	75.552	ENSMPUG00000016677	FARSB	100	75.552	Mustela_putorius_furo
ENSSFOG00015007850	farsb	100	75.552	ENSMLUG00000010904	FARSB	100	75.552	Myotis_lucifugus
ENSSFOG00015007850	farsb	100	75.340	ENSNGAG00000014602	Farsb	100	75.340	Nannospalax_galili
ENSSFOG00015007850	farsb	100	81.834	ENSNBRG00000003198	farsb	100	76.871	Neolamprologus_brichardi
ENSSFOG00015007850	farsb	100	75.042	ENSNLEG00000009638	FARSB	100	75.042	Nomascus_leucogenys
ENSSFOG00015007850	farsb	100	66.214	ENSMEUG00000010798	FARSB	100	66.214	Notamacropus_eugenii
ENSSFOG00015007850	farsb	89	68.345	ENSOPRG00000003292	FARSB	89	68.345	Ochotona_princeps
ENSSFOG00015007850	farsb	100	75.552	ENSODEG00000005451	FARSB	100	75.552	Octodon_degus
ENSSFOG00015007850	farsb	100	82.173	ENSONIG00000014639	farsb	100	82.173	Oreochromis_niloticus
ENSSFOG00015007850	farsb	91	74.157	ENSOANG00000015387	FARSB	99	74.157	Ornithorhynchus_anatinus
ENSSFOG00015007850	farsb	91	75.465	ENSOCUG00000007828	FARSB	94	75.465	Oryctolagus_cuniculus
ENSSFOG00015007850	farsb	100	80.985	ENSORLG00000009135	farsb	100	78.778	Oryzias_latipes
ENSSFOG00015007850	farsb	100	80.985	ENSORLG00015001072	farsb	100	70.707	Oryzias_latipes_hsok
ENSSFOG00015007850	farsb	100	80.815	ENSOMEG00000019009	farsb	100	76.054	Oryzias_melastigma
ENSSFOG00015007850	farsb	100	69.682	ENSOGAG00000010125	FARSB	100	69.682	Otolemur_garnettii
ENSSFOG00015007850	farsb	100	75.382	ENSOARG00000020329	FARSB	100	75.382	Ovis_aries
ENSSFOG00015007850	farsb	100	75.382	ENSPPAG00000039268	FARSB	100	75.382	Pan_paniscus
ENSSFOG00015007850	farsb	100	75.552	ENSPPRG00000010687	FARSB	100	75.552	Panthera_pardus
ENSSFOG00015007850	farsb	100	75.212	ENSPTIG00000004299	FARSB	100	75.212	Panthera_tigris_altaica
ENSSFOG00015007850	farsb	100	75.382	ENSPTRG00000012974	FARSB	100	75.382	Pan_troglodytes
ENSSFOG00015007850	farsb	100	74.703	ENSPANG00000016304	FARSB	100	74.703	Papio_anubis
ENSSFOG00015007850	farsb	100	82.624	ENSPKIG00000006661	farsb	100	82.624	Paramormyrops_kingsleyae
ENSSFOG00015007850	farsb	99	73.595	ENSPSIG00000006248	FARSB	99	73.595	Pelodiscus_sinensis
ENSSFOG00015007850	farsb	84	80.082	ENSPMGG00000002815	farsb	99	80.082	Periophthalmus_magnuspinnatus
ENSSFOG00015007850	farsb	100	75.382	ENSPEMG00000003131	Farsb	100	75.382	Peromyscus_maniculatus_bairdii
ENSSFOG00015007850	farsb	100	75.891	ENSPCIG00000019458	FARSB	100	75.891	Phascolarctos_cinereus
ENSSFOG00015007850	farsb	100	81.154	ENSPLAG00000001104	farsb	100	74.159	Poecilia_latipinna
ENSSFOG00015007850	farsb	100	81.154	ENSPMEG00000017658	farsb	100	74.159	Poecilia_mexicana
ENSSFOG00015007850	farsb	100	80.645	ENSPREG00000010583	farsb	100	73.514	Poecilia_reticulata
ENSSFOG00015007850	farsb	100	75.042	ENSPPYG00000013221	FARSB	100	75.042	Pongo_abelii
ENSSFOG00015007850	farsb	86	66.734	ENSPCAG00000002757	FARSB	84	66.734	Procavia_capensis
ENSSFOG00015007850	farsb	66	83.333	ENSPCOG00000028852	FARSB	100	83.333	Propithecus_coquereli
ENSSFOG00015007850	farsb	100	75.042	ENSPVAG00000006985	FARSB	100	75.042	Pteropus_vampyrus
ENSSFOG00015007850	farsb	100	69.270	ENSPNYG00000011433	farsb	100	69.270	Pundamilia_nyererei
ENSSFOG00015007850	farsb	100	82.852	ENSPNAG00000021802	farsb	100	82.852	Pygocentrus_nattereri
ENSSFOG00015007850	farsb	100	75.552	ENSRNOG00000014119	Farsb	100	75.552	Rattus_norvegicus
ENSSFOG00015007850	farsb	92	75.370	ENSRBIG00000033191	FARSB	97	75.370	Rhinopithecus_bieti
ENSSFOG00015007850	farsb	100	74.703	ENSRROG00000029388	FARSB	100	74.703	Rhinopithecus_roxellana
ENSSFOG00015007850	farsb	100	46.330	YLR060W	FRS1	100	46.330	Saccharomyces_cerevisiae
ENSSFOG00015007850	farsb	100	67.742	ENSSBOG00000019084	FARSB	100	67.742	Saimiri_boliviensis_boliviensis
ENSSFOG00015007850	farsb	91	71.612	ENSSHAG00000015752	FARSB	99	71.612	Sarcophilus_harrisii
ENSSFOG00015007850	farsb	100	81.324	ENSSMAG00000020668	farsb	100	79.117	Scophthalmus_maximus
ENSSFOG00015007850	farsb	100	82.003	ENSSDUG00000009685	farsb	100	77.234	Seriola_dumerili
ENSSFOG00015007850	farsb	100	82.003	ENSSLDG00000025206	farsb	100	77.759	Seriola_lalandi_dorsalis
ENSSFOG00015007850	farsb	61	76.027	ENSSARG00000005655	-	65	76.027	Sorex_araneus
ENSSFOG00015007850	farsb	95	71.123	ENSSPUG00000002245	FARSB	100	71.123	Sphenodon_punctatus
ENSSFOG00015007850	farsb	100	81.154	ENSSPAG00000007367	farsb	69	81.154	Stegastes_partitus
ENSSFOG00015007850	farsb	100	74.024	ENSSSCG00000016226	-	100	74.024	Sus_scrofa
ENSSFOG00015007850	farsb	100	68.825	ENSSSCG00000032016	-	100	68.825	Sus_scrofa
ENSSFOG00015007850	farsb	97	73.814	ENSTGUG00000007788	FARSB	99	73.814	Taeniopygia_guttata
ENSSFOG00015007850	farsb	100	77.589	ENSTRUG00000009483	farsb	70	77.589	Takifugu_rubripes
ENSSFOG00015007850	farsb	100	78.608	ENSTNIG00000014310	farsb	100	78.608	Tetraodon_nigroviridis
ENSSFOG00015007850	farsb	100	50.680	ENSTBEG00000003136	FARSB	100	50.680	Tupaia_belangeri
ENSSFOG00015007850	farsb	88	73.869	ENSTTRG00000009082	FARSB	88	73.869	Tursiops_truncatus
ENSSFOG00015007850	farsb	86	70.624	ENSUAMG00000024613	FARSB	98	70.624	Ursus_americanus
ENSSFOG00015007850	farsb	100	75.042	ENSUMAG00000017995	FARSB	100	75.042	Ursus_maritimus
ENSSFOG00015007850	farsb	92	72.089	ENSVPAG00000006844	FARSB	100	72.089	Vicugna_pacos
ENSSFOG00015007850	farsb	100	75.042	ENSVVUG00000024025	FARSB	100	75.042	Vulpes_vulpes
ENSSFOG00015007850	farsb	100	72.542	ENSXETG00000002934	farsb	100	72.542	Xenopus_tropicalis
ENSSFOG00015007850	farsb	100	80.306	ENSXMAG00000008280	farsb	100	70.408	Xiphophorus_maculatus