EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015008022 (Gene tree)
Gene ID: 108921507
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 5502 bases
Position: chrKV410807.1:301431-306932
Accession: 108921507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015012488	Surp	PF01805.20	1.8e-17	1	1
ENSSFOP00015012468	Surp	PF01805.20	2.4e-17	1	1
ENSSFOP00015012468	G-patch	PF01585.23	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015012645	-	1391	-	ENSSFOP00015012488	383 (aa)	-	-
ENSSFOT00015012625	-	2634	XM_018730988	ENSSFOP00015012468	877 (aa)	XP_018586504	-

Gene Model

Click here to download ENSSFOG00015008022's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008022	cherp	84	76.276	ENSG00000085872	CHERP	88	84.810	Homo_sapiens
ENSSFOG00015008022	cherp	75	79.021	ENSAPOG00000019215	cherp	96	77.431	Acanthochromis_polyacanthus
ENSSFOG00015008022	cherp	88	84.810	ENSACIG00000019242	cherp	88	84.810	Amphilophus_citrinellus
ENSSFOG00015008022	cherp	93	70.081	ENSAOCG00000017846	cherp	64	84.810	Amphiprion_ocellaris
ENSSFOG00015008022	cherp	93	74.366	ENSAPEG00000021128	cherp	64	84.810	Amphiprion_percula
ENSSFOG00015008022	cherp	92	75.910	ENSATEG00000006341	cherp	64	84.810	Anabas_testudineus
ENSSFOG00015008022	cherp	62	82.083	ENSAPLG00000010773	CHERP	78	59.167	Anas_platyrhynchos
ENSSFOG00015008022	cherp	84	73.547	ENSANAG00000024284	CHERP	88	84.810	Aotus_nancymaae
ENSSFOG00015008022	cherp	88	83.951	ENSACLG00000020053	cherp	64	83.951	Astatotilapia_calliptera
ENSSFOG00015008022	cherp	84	82.769	ENSAMXG00000021637	cherp	83	84.615	Astyanax_mexicanus
ENSSFOG00015008022	cherp	84	76.558	ENSBTAG00000005289	CHERP	81	60.594	Bos_taurus
ENSSFOG00015008022	cherp	84	73.547	ENSCJAG00000040462	CHERP	88	84.810	Callithrix_jacchus
ENSSFOG00015008022	cherp	84	73.256	ENSCAFG00000015671	CHERP	79	59.597	Canis_familiaris
ENSSFOG00015008022	cherp	59	84.000	ENSCAFG00020009941	CHERP	99	58.482	Canis_lupus_dingo
ENSSFOG00015008022	cherp	83	78.154	ENSCHIG00000013765	CHERP	94	84.810	Capra_hircus
ENSSFOG00015008022	cherp	60	83.772	ENSCAPG00000000910	CHERP	68	55.200	Cavia_aperea
ENSSFOG00015008022	cherp	84	73.547	ENSCCAG00000031534	CHERP	88	84.810	Cebus_capucinus
ENSSFOG00015008022	cherp	59	79.661	ENSCATG00000031409	CHERP	88	84.810	Cercocebus_atys
ENSSFOG00015008022	cherp	59	79.237	ENSCLAG00000005484	CHERP	73	57.143	Chinchilla_lanigera
ENSSFOG00015008022	cherp	59	84.000	ENSCSAG00000005740	CHERP	88	84.810	Chlorocebus_sabaeus
ENSSFOG00015008022	cherp	84	80.122	ENSCPBG00000014970	CHERP	79	60.935	Chrysemys_picta_bellii
ENSSFOG00015008022	cherp	84	37.313	ENSCING00000004814	-	54	70.297	Ciona_intestinalis
ENSSFOG00015008022	cherp	84	75.821	ENSCANG00000032053	CHERP	88	84.810	Colobus_angolensis_palliatus
ENSSFOG00015008022	cherp	84	73.410	ENSCGRG00001023316	Cherp	87	84.810	Cricetulus_griseus_chok1gshd
ENSSFOG00015008022	cherp	83	76.435	ENSCGRG00000015901	Cherp	88	84.810	Cricetulus_griseus_crigri
ENSSFOG00015008022	cherp	93	74.719	ENSCSEG00000019700	cherp	87	81.928	Cynoglossus_semilaevis
ENSSFOG00015008022	cherp	86	78.012	ENSCVAG00000003622	cherp	93	57.759	Cyprinodon_variegatus
ENSSFOG00015008022	cherp	84	79.193	ENSDARG00000021812	cherp	99	77.734	Danio_rerio
ENSSFOG00015008022	cherp	61	82.759	ENSDORG00000027623	Cherp	81	58.570	Dipodomys_ordii
ENSSFOG00015008022	cherp	56	72.444	ENSETEG00000019543	CHERP	54	75.688	Echinops_telfairi
ENSSFOG00015008022	cherp	84	72.543	ENSEASG00005000428	CHERP	73	60.189	Equus_asinus_asinus
ENSSFOG00015008022	cherp	84	75.668	ENSECAG00000012713	CHERP	79	60.189	Equus_caballus
ENSSFOG00015008022	cherp	84	81.056	ENSELUG00000023026	cherp	67	85.714	Esox_lucius
ENSSFOG00015008022	cherp	59	79.661	ENSFCAG00000013172	CHERP	80	56.878	Felis_catus
ENSSFOG00015008022	cherp	84	72.622	ENSFALG00000013410	CHERP	68	59.244	Ficedula_albicollis
ENSSFOG00015008022	cherp	91	59.829	ENSFHEG00000009720	cherp	52	49.901	Fundulus_heteroclitus
ENSSFOG00015008022	cherp	83	76.615	ENSGMOG00000008654	cherp	62	83.544	Gadus_morhua
ENSSFOG00015008022	cherp	84	80.368	ENSGALG00000003824	CHERP	70	56.753	Gallus_gallus
ENSSFOG00015008022	cherp	85	79.448	ENSGAFG00000004421	cherp	87	74.648	Gambusia_affinis
ENSSFOG00015008022	cherp	88	70.278	ENSGACG00000002053	cherp	86	82.278	Gasterosteus_aculeatus
ENSSFOG00015008022	cherp	84	79.817	ENSGAGG00000014208	CHERP	79	60.935	Gopherus_agassizii
ENSSFOG00015008022	cherp	59	79.661	ENSGGOG00000016348	CHERP	82	84.810	Gorilla_gorilla
ENSSFOG00015008022	cherp	93	76.124	ENSHBUG00000007405	cherp	87	65.495	Haplochromis_burtoni
ENSSFOG00015008022	cherp	84	72.543	ENSHGLG00000002993	CHERP	87	84.810	Heterocephalus_glaber_female
ENSSFOG00015008022	cherp	82	73.006	ENSHGLG00100010390	CHERP	53	72.727	Heterocephalus_glaber_male
ENSSFOG00015008022	cherp	81	81.707	ENSHCOG00000007691	cherp	88	81.707	Hippocampus_comes
ENSSFOG00015008022	cherp	85	83.486	ENSIPUG00000025008	cherp	98	60.065	Ictalurus_punctatus
ENSSFOG00015008022	cherp	82	75.455	ENSSTOG00000012089	CHERP	80	60.109	Ictidomys_tridecemlineatus
ENSSFOG00015008022	cherp	94	69.737	ENSKMAG00000009101	cherp	98	64.537	Kryptolebias_marmoratus
ENSSFOG00015008022	cherp	87	76.506	ENSLBEG00000007586	cherp	86	69.364	Labrus_bergylta
ENSSFOG00015008022	cherp	84	80.675	ENSLACG00000018221	CHERP	98	56.961	Latimeria_chalumnae
ENSSFOG00015008022	cherp	84	82.440	ENSLOCG00000003654	cherp	54	64.971	Lepisosteus_oculatus
ENSSFOG00015008022	cherp	84	75.371	ENSLAFG00000009096	CHERP	79	60.606	Loxodonta_africana
ENSSFOG00015008022	cherp	59	79.661	ENSMFAG00000033267	CHERP	88	84.810	Macaca_fascicularis
ENSSFOG00015008022	cherp	59	79.661	ENSMMUG00000012958	CHERP	81	59.043	Macaca_mulatta
ENSSFOG00015008022	cherp	59	79.661	ENSMNEG00000004125	CHERP	88	84.810	Macaca_nemestrina
ENSSFOG00015008022	cherp	84	75.294	ENSMLEG00000044337	CHERP	69	84.810	Mandrillus_leucophaeus
ENSSFOG00015008022	cherp	93	74.648	ENSMAMG00000022269	cherp	64	83.544	Mastacembelus_armatus
ENSSFOG00015008022	cherp	88	83.951	ENSMZEG00005018014	cherp	62	83.951	Maylandia_zebra
ENSSFOG00015008022	cherp	60	84.211	ENSMGAG00000005571	CHERP	71	59.400	Meleagris_gallopavo
ENSSFOG00015008022	cherp	84	75.444	ENSMAUG00000015856	Cherp	87	84.810	Mesocricetus_auratus
ENSSFOG00015008022	cherp	84	78.419	ENSMICG00000004577	CHERP	79	60.569	Microcebus_murinus
ENSSFOG00015008022	cherp	84	76.119	ENSMOCG00000014697	Cherp	87	84.810	Microtus_ochrogaster
ENSSFOG00015008022	cherp	93	71.739	ENSMMOG00000008525	cherp	80	59.448	Mola_mola
ENSSFOG00015008022	cherp	84	75.074	ENSMODG00000014938	CHERP	65	76.647	Monodelphis_domestica
ENSSFOG00015008022	cherp	84	78.947	ENSMALG00000020688	cherp	64	83.544	Monopterus_albus
ENSSFOG00015008022	cherp	84	75.522	MGP_CAROLIEiJ_G0031220	Cherp	87	84.810	Mus_caroli
ENSSFOG00015008022	cherp	84	75.522	ENSMUSG00000052488	Cherp	81	56.774	Mus_musculus
ENSSFOG00015008022	cherp	84	75.522	MGP_PahariEiJ_G0021685	Cherp	87	84.810	Mus_pahari
ENSSFOG00015008022	cherp	84	75.522	MGP_SPRETEiJ_G0032341	Cherp	87	84.810	Mus_spretus
ENSSFOG00015008022	cherp	84	72.046	ENSMPUG00000016023	CHERP	85	83.544	Mustela_putorius_furo
ENSSFOG00015008022	cherp	84	64.793	ENSMLUG00000013881	CHERP	79	55.242	Myotis_lucifugus
ENSSFOG00015008022	cherp	87	74.277	ENSNBRG00000001914	cherp	69	82.308	Neolamprologus_brichardi
ENSSFOG00015008022	cherp	59	84.000	ENSNLEG00000005536	CHERP	88	84.810	Nomascus_leucogenys
ENSSFOG00015008022	cherp	75	78.912	ENSMEUG00000010840	CHERP	62	78.621	Notamacropus_eugenii
ENSSFOG00015008022	cherp	82	76.543	ENSODEG00000001528	CHERP	81	58.672	Octodon_degus
ENSSFOG00015008022	cherp	93	72.554	ENSONIG00000007686	cherp	62	83.544	Oreochromis_niloticus
ENSSFOG00015008022	cherp	93	75.000	ENSORLG00000000138	cherp	64	81.013	Oryzias_latipes
ENSSFOG00015008022	cherp	93	74.719	ENSORLG00020013142	cherp	97	69.110	Oryzias_latipes_hni
ENSSFOG00015008022	cherp	93	74.438	ENSORLG00015008911	cherp	64	81.013	Oryzias_latipes_hsok
ENSSFOG00015008022	cherp	92	72.678	ENSOMEG00000016947	cherp	81	74.221	Oryzias_melastigma
ENSSFOG00015008022	cherp	84	72.861	ENSOGAG00000005834	CHERP	87	81.481	Otolemur_garnettii
ENSSFOG00015008022	cherp	84	58.944	ENSOARG00000018876	CHERP	78	52.568	Ovis_aries
ENSSFOG00015008022	cherp	84	73.547	ENSPPAG00000029195	CHERP	88	84.810	Pan_paniscus
ENSSFOG00015008022	cherp	59	79.661	ENSPPRG00000003275	CHERP	80	56.878	Panthera_pardus
ENSSFOG00015008022	cherp	83	62.733	ENSPTIG00000019778	CHERP	62	84.091	Panthera_tigris_altaica
ENSSFOG00015008022	cherp	84	76.276	ENSPTRG00000010647	CHERP	88	84.810	Pan_troglodytes
ENSSFOG00015008022	cherp	59	79.661	ENSPANG00000011698	CHERP	88	84.810	Papio_anubis
ENSSFOG00015008022	cherp	93	88.154	ENSPKIG00000000423	cherp	86	91.304	Paramormyrops_kingsleyae
ENSSFOG00015008022	cherp	83	80.308	ENSPSIG00000011974	CHERP	79	61.012	Pelodiscus_sinensis
ENSSFOG00015008022	cherp	88	75.516	ENSPMGG00000023606	cherp	88	83.133	Periophthalmus_magnuspinnatus
ENSSFOG00015008022	cherp	84	73.699	ENSPEMG00000011238	Cherp	87	84.810	Peromyscus_maniculatus_bairdii
ENSSFOG00015008022	cherp	84	53.731	ENSPMAG00000001655	-	90	54.693	Petromyzon_marinus
ENSSFOG00015008022	cherp	84	75.371	ENSPCIG00000019615	CHERP	77	57.784	Phascolarctos_cinereus
ENSSFOG00015008022	cherp	87	77.313	ENSPFOG00000016899	cherp	78	57.613	Poecilia_formosa
ENSSFOG00015008022	cherp	86	77.576	ENSPLAG00000003350	cherp	94	74.359	Poecilia_latipinna
ENSSFOG00015008022	cherp	56	81.429	ENSPMEG00000002214	cherp	76	55.966	Poecilia_mexicana
ENSSFOG00015008022	cherp	87	77.612	ENSPREG00000020774	cherp	78	58.162	Poecilia_reticulata
ENSSFOG00015008022	cherp	84	77.508	ENSPPYG00000009691	CHERP	87	81.013	Pongo_abelii
ENSSFOG00015008022	cherp	84	75.904	ENSPCAG00000001337	CHERP	88	83.544	Procavia_capensis
ENSSFOG00015008022	cherp	84	73.256	ENSPVAG00000004320	CHERP	88	83.544	Pteropus_vampyrus
ENSSFOG00015008022	cherp	88	83.951	ENSPNYG00000003942	cherp	63	83.951	Pundamilia_nyererei
ENSSFOG00015008022	cherp	85	82.875	ENSPNAG00000017179	cherp	87	86.842	Pygocentrus_nattereri
ENSSFOG00015008022	cherp	84	75.522	ENSRNOG00000012323	Cherp	87	84.810	Rattus_norvegicus
ENSSFOG00015008022	cherp	59	84.000	ENSRBIG00000038621	CHERP	88	84.810	Rhinopithecus_bieti
ENSSFOG00015008022	cherp	59	79.661	ENSRROG00000040770	CHERP	88	84.810	Rhinopithecus_roxellana
ENSSFOG00015008022	cherp	84	73.547	ENSSBOG00000014492	CHERP	88	84.810	Saimiri_boliviensis_boliviensis
ENSSFOG00015008022	cherp	83	76.133	ENSSHAG00000010752	CHERP	64	77.812	Sarcophilus_harrisii
ENSSFOG00015008022	cherp	83	74.924	ENSSMAG00000005362	cherp	64	82.278	Scophthalmus_maximus
ENSSFOG00015008022	cherp	84	79.257	ENSSDUG00000019712	cherp	65	83.544	Seriola_dumerili
ENSSFOG00015008022	cherp	84	78.947	ENSSLDG00000012659	cherp	65	83.544	Seriola_lalandi_dorsalis
ENSSFOG00015008022	cherp	84	77.576	ENSSPUG00000008901	CHERP	78	61.165	Sphenodon_punctatus
ENSSFOG00015008022	cherp	93	75.630	ENSSPAG00000010681	cherp	64	82.716	Stegastes_partitus
ENSSFOG00015008022	cherp	84	78.378	ENSTGUG00000000680	CHERP	79	60.487	Taeniopygia_guttata
ENSSFOG00015008022	cherp	92	75.000	ENSTRUG00000007429	cherp	88	62.783	Takifugu_rubripes
ENSSFOG00015008022	cherp	84	78.947	ENSTNIG00000003363	cherp	99	63.057	Tetraodon_nigroviridis
ENSSFOG00015008022	cherp	59	84.000	ENSUAMG00000017295	CHERP	79	58.564	Ursus_americanus
ENSSFOG00015008022	cherp	84	75.602	ENSXETG00000002072	cherp	66	83.333	Xenopus_tropicalis
ENSSFOG00015008022	cherp	85	76.946	ENSXCOG00000005936	cherp	98	70.292	Xiphophorus_couchianus
ENSSFOG00015008022	cherp	85	79.321	ENSXMAG00000008026	cherp	91	76.176	Xiphophorus_maculatus