EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008079 (Gene tree)
Gene ID: 108922948
Gene Symbol: zic3
Alias: cb807|id:ibd2176|wu:fj52a10|wu:fq33c12
Full Name: zinc finger protein ZIC 3-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2735 bases
Position: chrKV410820.1:6711698-6714432
Accession: 108922948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015012530	zf-C2H2	PF00096.26	2.6e-21	1	4
ENSSFOP00015012530	zf-C2H2	PF00096.26	2.6e-21	2	4
ENSSFOP00015012530	zf-C2H2	PF00096.26	2.6e-21	3	4
ENSSFOP00015012530	zf-C2H2	PF00096.26	2.6e-21	4	4
ENSSFOP00015012530	zf-met	PF12874.7	0.00054	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015012689	-	1203	XM_018733361	ENSSFOP00015012530	400 (aa)	XP_018588877	-

Gene Model

Click here to download ENSSFOG00015008079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008079	zic3	50	42.202	ENSSFOG00015003121	znf668	80	42.202
ENSSFOG00015008079	zic3	100	77.728	ENSSFOG00015011731	zic3	100	77.728

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008079	zic3	100	68.522	ENSG00000156925	ZIC3	99	68.522	Homo_sapiens
ENSSFOG00015008079	zic3	100	68.951	ENSANAG00000019614	ZIC3	99	68.951	Aotus_nancymaae
ENSSFOG00015008079	zic3	100	68.951	ENSCJAG00000013792	ZIC3	99	68.951	Callithrix_jacchus
ENSSFOG00015008079	zic3	100	68.884	ENSCAFG00000018979	ZIC3	99	68.884	Canis_familiaris
ENSSFOG00015008079	zic3	100	66.595	ENSTSYG00000003356	ZIC3	99	66.595	Carlito_syrichta
ENSSFOG00015008079	zic3	62	87.045	ENSCPOG00000002374	ZIC3	100	87.045	Cavia_porcellus
ENSSFOG00015008079	zic3	100	68.951	ENSCCAG00000025983	ZIC3	99	68.951	Cebus_capucinus
ENSSFOG00015008079	zic3	100	68.884	ENSCATG00000036569	ZIC3	99	68.884	Cercocebus_atys
ENSSFOG00015008079	zic3	100	68.884	ENSCLAG00000001934	ZIC3	99	68.884	Chinchilla_lanigera
ENSSFOG00015008079	zic3	92	72.600	ENSCPBG00000026115	ZIC3	100	72.834	Chrysemys_picta_bellii
ENSSFOG00015008079	zic3	100	68.884	ENSCANG00000017505	ZIC3	99	68.884	Colobus_angolensis_palliatus
ENSSFOG00015008079	zic3	100	68.670	ENSCGRG00001024527	Zic3	99	68.670	Cricetulus_griseus_chok1gshd
ENSSFOG00015008079	zic3	100	68.884	ENSDORG00000025481	Zic3	99	68.884	Dipodomys_ordii
ENSSFOG00015008079	zic3	100	68.884	ENSFCAG00000025684	ZIC3	99	68.884	Felis_catus
ENSSFOG00015008079	zic3	86	80.580	ENSFDAG00000014929	ZIC3	100	86.235	Fukomys_damarensis
ENSSFOG00015008079	zic3	92	68.837	ENSGAGG00000004149	ZIC3	92	69.070	Gopherus_agassizii
ENSSFOG00015008079	zic3	100	68.670	ENSGGOG00000011914	ZIC3	99	68.670	Gorilla_gorilla
ENSSFOG00015008079	zic3	100	68.455	ENSHGLG00000006298	ZIC3	99	68.455	Heterocephalus_glaber_female
ENSSFOG00015008079	zic3	78	53.994	ENSHGLG00100002829	ZIC3	99	62.620	Heterocephalus_glaber_male
ENSSFOG00015008079	zic3	100	68.884	ENSJJAG00000022714	Zic3	99	68.884	Jaculus_jaculus
ENSSFOG00015008079	zic3	100	74.607	ENSLACG00000014597	ZIC3	99	74.607	Latimeria_chalumnae
ENSSFOG00015008079	zic3	85	81.121	ENSLAFG00000007048	ZIC3	87	81.121	Loxodonta_africana
ENSSFOG00015008079	zic3	100	68.884	ENSMFAG00000027018	ZIC3	99	68.884	Macaca_fascicularis
ENSSFOG00015008079	zic3	86	68.550	ENSMMUG00000002023	ZIC3	89	68.550	Macaca_mulatta
ENSSFOG00015008079	zic3	100	68.884	ENSMNEG00000040682	ZIC3	99	68.884	Macaca_nemestrina
ENSSFOG00015008079	zic3	100	68.884	ENSMLEG00000004378	ZIC3	99	68.884	Mandrillus_leucophaeus
ENSSFOG00015008079	zic3	100	68.884	ENSMAUG00000009402	Zic3	99	68.884	Mesocricetus_auratus
ENSSFOG00015008079	zic3	100	68.737	ENSMICG00000042529	ZIC3	99	68.737	Microcebus_murinus
ENSSFOG00015008079	zic3	86	80.580	ENSMOCG00000020544	Zic3	99	69.032	Microtus_ochrogaster
ENSSFOG00015008079	zic3	100	68.670	MGP_CAROLIEiJ_G0033101	Zic3	100	86.235	Mus_caroli
ENSSFOG00015008079	zic3	100	68.670	ENSMUSG00000067860	Zic3	100	86.235	Mus_musculus
ENSSFOG00015008079	zic3	100	68.670	MGP_PahariEiJ_G0031644	Zic3	100	86.235	Mus_pahari
ENSSFOG00015008079	zic3	100	68.670	MGP_SPRETEiJ_G0034256	Zic3	100	86.235	Mus_spretus
ENSSFOG00015008079	zic3	100	68.670	ENSNGAG00000023346	Zic3	99	68.670	Nannospalax_galili
ENSSFOG00015008079	zic3	100	69.024	ENSNLEG00000003005	-	99	68.780	Nomascus_leucogenys
ENSSFOG00015008079	zic3	100	68.884	ENSODEG00000005556	ZIC3	99	68.884	Octodon_degus
ENSSFOG00015008079	zic3	100	68.670	ENSPPAG00000030013	ZIC3	99	68.670	Pan_paniscus
ENSSFOG00015008079	zic3	100	68.951	ENSPPRG00000010839	ZIC3	99	68.951	Panthera_pardus
ENSSFOG00015008079	zic3	100	68.670	ENSPTRG00000043849	ZIC3	99	68.670	Pan_troglodytes
ENSSFOG00015008079	zic3	100	68.884	ENSPANG00000011357	ZIC3	99	68.884	Papio_anubis
ENSSFOG00015008079	zic3	100	80.269	ENSPKIG00000017705	zic3	99	80.269	Paramormyrops_kingsleyae
ENSSFOG00015008079	zic3	73	84.932	ENSPSIG00000011896	ZIC3	99	84.932	Pelodiscus_sinensis
ENSSFOG00015008079	zic3	100	68.884	ENSPEMG00000022168	Zic3	99	68.884	Peromyscus_maniculatus_bairdii
ENSSFOG00015008079	zic3	100	68.455	ENSPCOG00000021557	ZIC3	99	68.455	Propithecus_coquereli
ENSSFOG00015008079	zic3	100	68.240	ENSRNOG00000000861	Zic3	99	68.240	Rattus_norvegicus
ENSSFOG00015008079	zic3	100	68.884	ENSRBIG00000030660	ZIC3	99	68.884	Rhinopithecus_bieti
ENSSFOG00015008079	zic3	100	68.884	ENSRROG00000028410	ZIC3	99	68.884	Rhinopithecus_roxellana
ENSSFOG00015008079	zic3	100	68.951	ENSSBOG00000024684	ZIC3	99	68.951	Saimiri_boliviensis_boliviensis
ENSSFOG00015008079	zic3	85	78.886	ENSTGUG00000002155	ZIC3	97	73.890	Taeniopygia_guttata
ENSSFOG00015008079	zic3	100	68.884	ENSVVUG00000021378	ZIC3	99	68.884	Vulpes_vulpes
ENSSFOG00015008079	zic3	100	70.917	ENSXETG00000024458	zic3	99	70.917	Xenopus_tropicalis