EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008114 (Gene tree)
Gene ID: 108940060
Gene Symbol: -
Alias: -
Full Name: zinc finger protein Gfi-1b-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2167 bases
Position: chrKV411197.1:8909495-8911661
Accession: 108940060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015012561	zf-C2H2	PF00096.26	6.5e-27	1	5
ENSSFOP00015012561	zf-C2H2	PF00096.26	6.5e-27	2	5
ENSSFOP00015012561	zf-C2H2	PF00096.26	6.5e-27	3	5
ENSSFOP00015012561	zf-C2H2	PF00096.26	6.5e-27	4	5
ENSSFOP00015012561	zf-C2H2	PF00096.26	6.5e-27	5	5
ENSSFOP00015012567	zf-C2H2	PF00096.26	6e-16	1	3
ENSSFOP00015012567	zf-C2H2	PF00096.26	6e-16	2	3
ENSSFOP00015012567	zf-C2H2	PF00096.26	6e-16	3	3
ENSSFOP00015012561	zf-met	PF12874.7	3.2e-09	1	2
ENSSFOP00015012561	zf-met	PF12874.7	3.2e-09	2	2
ENSSFOP00015012567	zf-met	PF12874.7	3.1e-07	1	2
ENSSFOP00015012567	zf-met	PF12874.7	3.1e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015012719	-	1013	XM_018761888	ENSSFOP00015012561	324 (aa)	XP_018617404	A0A1W5AP38
ENSSFOT00015012725	-	1034	-	ENSSFOP00015012567	331 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015008114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008114	-	57	38.824	ENSSFOG00015009678	-	59	38.554
ENSSFOG00015008114	-	54	41.026	ENSSFOG00015023669	-	87	36.620
ENSSFOG00015008114	-	85	43.038	ENSSFOG00015008994	znf236	52	43.038
ENSSFOG00015008114	-	67	35.455	ENSSFOG00015018025	SNAI2	99	35.455
ENSSFOG00015008114	-	53	37.126	ENSSFOG00015006083	-	53	43.269
ENSSFOG00015008114	-	78	30.909	ENSSFOG00015012089	ZNF319	88	43.373
ENSSFOG00015008114	-	59	38.596	ENSSFOG00015003121	znf668	85	38.596
ENSSFOG00015008114	-	52	36.364	ENSSFOG00015020478	prdm5	60	36.364
ENSSFOG00015008114	-	53	39.645	ENSSFOG00015021831	-	76	39.645
ENSSFOG00015008114	-	52	37.415	ENSSFOG00015015958	-	59	37.415
ENSSFOG00015008114	-	60	30.526	ENSSFOG00015013930	PRDM15	50	31.176
ENSSFOG00015008114	-	67	44.444	ENSSFOG00015011566	gfi1b	90	36.396
ENSSFOG00015008114	-	56	37.349	ENSSFOG00015013448	-	81	37.349
ENSSFOG00015008114	-	52	39.640	ENSSFOG00015015427	znf366	51	39.640
ENSSFOG00015008114	-	59	37.778	ENSSFOG00015017155	-	68	37.778
ENSSFOG00015008114	-	57	38.393	ENSSFOG00015020993	-	79	38.393
ENSSFOG00015008114	-	53	30.814	ENSSFOG00015021578	snai1a	58	30.814
ENSSFOG00015008114	-	89	36.628	ENSSFOG00015023839	znf384l	58	36.628
ENSSFOG00015008114	-	56	40.179	ENSSFOG00015000652	ZNF775	85	39.759
ENSSFOG00015008114	-	56	37.952	ENSSFOG00015015384	-	80	37.952
ENSSFOG00015008114	-	57	38.211	ENSSFOG00015012207	-	85	32.456
ENSSFOG00015008114	-	56	39.286	ENSSFOG00015019818	-	79	39.286
ENSSFOG00015008114	-	53	43.860	ENSSFOG00015008577	-	95	42.727
ENSSFOG00015008114	-	52	44.554	ENSSFOG00015015878	-	95	44.554
ENSSFOG00015008114	-	56	34.682	ENSSFOG00015023295	znf652	80	34.454
ENSSFOG00015008114	-	68	36.449	ENSSFOG00015010128	ZNF521	54	36.449
ENSSFOG00015008114	-	94	36.145	ENSSFOG00015010829	-	61	38.554
ENSSFOG00015008114	-	55	37.952	ENSSFOG00015006108	-	58	37.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008114	-	51	64.242	ENSAMEG00000013858	-	85	64.242	Ailuropoda_melanoleuca
ENSSFOG00015008114	-	53	49.701	ENSACIG00000002180	-	96	49.701	Amphilophus_citrinellus
ENSSFOG00015008114	-	80	47.529	ENSAPLG00000015700	GFI1	54	63.690	Anas_platyrhynchos
ENSSFOG00015008114	-	54	85.593	ENSACLG00000001258	-	95	85.593	Astatotilapia_calliptera
ENSSFOG00015008114	-	85	57.018	ENSACLG00000026458	gfi1ab	91	57.018	Astatotilapia_calliptera
ENSSFOG00015008114	-	98	41.316	ENSAMXG00000039600	gfi1ab	52	56.566	Astyanax_mexicanus
ENSSFOG00015008114	-	99	48.485	ENSAMXG00000015228	-	98	47.720	Astyanax_mexicanus
ENSSFOG00015008114	-	98	43.333	ENSAMXG00000006669	GFI1	99	42.598	Astyanax_mexicanus
ENSSFOG00015008114	-	52	83.929	ENSCAPG00000016268	-	93	89.655	Cavia_aperea
ENSSFOG00015008114	-	89	57.018	ENSCLAG00000005915	GFI1	88	57.018	Chinchilla_lanigera
ENSSFOG00015008114	-	52	58.182	ENSCING00000011342	-	86	58.182	Ciona_intestinalis
ENSSFOG00015008114	-	52	63.690	ENSCSEG00000017729	GFI1	99	57.018	Cynoglossus_semilaevis
ENSSFOG00015008114	-	98	41.514	ENSCVAG00000011828	gfi1ab	99	41.514	Cyprinodon_variegatus
ENSSFOG00015008114	-	98	45.714	ENSEBUG00000008075	gfi1ab	98	45.714	Eptatretus_burgeri
ENSSFOG00015008114	-	52	63.690	ENSEASG00005015509	GFI1	86	63.690	Equus_asinus_asinus
ENSSFOG00015008114	-	98	48.630	ENSECAG00000006647	GFI1	94	48.630	Equus_caballus
ENSSFOG00015008114	-	66	63.256	ENSELUG00000006948	-	63	63.256	Esox_lucius
ENSSFOG00015008114	-	98	38.303	ENSGMOG00000007737	gfi1ab	98	56.140	Gadus_morhua
ENSSFOG00015008114	-	98	41.176	ENSGAFG00000016637	gfi1ab	99	44.118	Gambusia_affinis
ENSSFOG00015008114	-	99	47.748	ENSGAFG00000014303	-	91	47.432	Gambusia_affinis
ENSSFOG00015008114	-	98	42.643	ENSHCOG00000019555	GFI1	99	42.857	Hippocampus_comes
ENSSFOG00015008114	-	52	63.095	ENSIPUG00000010071	gfi1ab	86	63.095	Ictalurus_punctatus
ENSSFOG00015008114	-	97	50.943	ENSIPUG00000021407	-	96	50.158	Ictalurus_punctatus
ENSSFOG00015008114	-	52	83.929	ENSJJAG00000022622	-	93	89.655	Jaculus_jaculus
ENSSFOG00015008114	-	98	41.795	ENSKMAG00000003810	gfi1ab	57	53.125	Kryptolebias_marmoratus
ENSSFOG00015008114	-	85	57.018	ENSLBEG00000027776	gfi1ab	98	57.018	Labrus_bergylta
ENSSFOG00015008114	-	53	66.667	ENSLACG00000017590	-	52	66.667	Latimeria_chalumnae
ENSSFOG00015008114	-	52	64.286	ENSMZEG00005009895	gfi1ab	98	57.018	Maylandia_zebra
ENSSFOG00015008114	-	80	47.909	ENSMGAG00000008187	GFI1	56	57.018	Meleagris_gallopavo
ENSSFOG00015008114	-	98	42.391	ENSMMOG00000005556	gfi1ab	55	57.619	Mola_mola
ENSSFOG00015008114	-	53	62.428	ENSMODG00000011802	GFI1	98	55.462	Monodelphis_domestica
ENSSFOG00015008114	-	52	63.690	MGP_CAROLIEiJ_G0027508	Gfi1	93	88.136	Mus_caroli
ENSSFOG00015008114	-	52	63.690	MGP_PahariEiJ_G0017280	Gfi1	93	88.136	Mus_pahari
ENSSFOG00015008114	-	51	86.607	ENSNBRG00000010351	-	87	91.667	Neolamprologus_brichardi
ENSSFOG00015008114	-	85	57.018	ENSNBRG00000015774	gfi1ab	98	57.018	Neolamprologus_brichardi
ENSSFOG00015008114	-	85	57.018	ENSONIG00000019246	gfi1ab	98	57.018	Oreochromis_niloticus
ENSSFOG00015008114	-	98	41.995	ENSORLG00000013806	gfi1ab	99	41.775	Oryzias_latipes
ENSSFOG00015008114	-	97	44.970	ENSORLG00020002817	GFI1	50	64.242	Oryzias_latipes_hni
ENSSFOG00015008114	-	98	42.820	ENSORLG00020001602	gfi1ab	99	41.667	Oryzias_latipes_hni
ENSSFOG00015008114	-	98	42.049	ENSOGAG00000027913	GFI1	99	63.690	Otolemur_garnettii
ENSSFOG00015008114	-	52	83.186	ENSPTIG00000002680	-	84	83.186	Panthera_tigris_altaica
ENSSFOG00015008114	-	52	63.690	ENSPSIG00000008734	GFI1	79	63.690	Pelodiscus_sinensis
ENSSFOG00015008114	-	97	43.438	ENSPMGG00000011041	GFI1	57	59.669	Periophthalmus_magnuspinnatus
ENSSFOG00015008114	-	52	64.286	ENSPMGG00000012546	gfi1ab	99	41.489	Periophthalmus_magnuspinnatus
ENSSFOG00015008114	-	98	45.092	ENSPFOG00000024581	-	99	45.092	Poecilia_formosa
ENSSFOG00015008114	-	69	52.679	ENSPFOG00000023214	gfi1ab	56	52.679	Poecilia_formosa
ENSSFOG00015008114	-	98	45.833	ENSPLAG00000010879	gfi1ab	99	43.988	Poecilia_latipinna
ENSSFOG00015008114	-	69	52.679	ENSPMEG00000013694	gfi1ab	56	52.679	Poecilia_mexicana
ENSSFOG00015008114	-	52	63.690	ENSPMEG00000019299	GFI1	98	57.018	Poecilia_mexicana
ENSSFOG00015008114	-	85	44.118	ENSPREG00000014097	gfi1ab	57	52.679	Poecilia_reticulata
ENSSFOG00015008114	-	98	41.691	ENSPREG00000007997	GFI1	99	42.029	Poecilia_reticulata
ENSSFOG00015008114	-	85	57.018	ENSPNYG00000021183	gfi1ab	98	57.018	Pundamilia_nyererei
ENSSFOG00015008114	-	97	48.780	ENSPNAG00000014299	-	96	48.780	Pygocentrus_nattereri
ENSSFOG00015008114	-	99	48.048	ENSSMAG00000002798	-	99	48.048	Scophthalmus_maximus
ENSSFOG00015008114	-	54	79.839	ENSSLDG00000017614	-	93	80.556	Seriola_lalandi_dorsalis
ENSSFOG00015008114	-	98	44.136	ENSSPAG00000009140	gfi1ab	99	42.262	Stegastes_partitus
ENSSFOG00015008114	-	56	58.333	ENSTGUG00000006060	GFI1	55	58.333	Taeniopygia_guttata
ENSSFOG00015008114	-	98	62.428	ENSUAMG00000021124	GFI1	90	63.690	Ursus_americanus
ENSSFOG00015008114	-	51	84.906	ENSXCOG00000009186	-	83	87.500	Xiphophorus_couchianus
ENSSFOG00015008114	-	69	52.679	ENSXMAG00000010523	gfi1ab	99	44.118	Xiphophorus_maculatus
ENSSFOG00015008114	-	98	45.679	ENSXMAG00000006527	-	51	66.864	Xiphophorus_maculatus