EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015008156 (Gene tree)
Gene ID: 108919921
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 17952 bases
Position: chrKV411278.1:5094099-5112050
Accession: 108919921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015012632	RRM_5	PF13893.6	8.1e-07	1	1
ENSSFOP00015012616	RRM_5	PF13893.6	9e-07	1	1
ENSSFOP00015012632	RRM_1	PF00076.22	3.5e-13	1	1
ENSSFOP00015012616	RRM_1	PF00076.22	3.8e-13	1	1
ENSSFOP00015012632	SAP	PF02037.27	2.9e-08	1	1
ENSSFOP00015012616	SAP	PF02037.27	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015012790	-	3462	XM_018728326	ENSSFOP00015012632	869 (aa)	XP_018583842	A0A1W4XWV4
ENSSFOT00015012774	-	3565	-	ENSSFOP00015012616	916 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015008156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008156	safb	95	46.587	ENSG00000160633	SAFB	95	44.647	Homo_sapiens
ENSSFOG00015008156	safb	99	64.179	ENSAPOG00000022508	safb	99	63.720	Acanthochromis_polyacanthus
ENSSFOG00015008156	safb	67	45.814	ENSAMEG00000012254	SAFB	96	43.991	Ailuropoda_melanoleuca
ENSSFOG00015008156	safb	99	58.851	ENSACIG00000006247	safb	100	57.719	Amphilophus_citrinellus
ENSSFOG00015008156	safb	95	63.114	ENSAOCG00000006308	safb	99	62.635	Amphiprion_ocellaris
ENSSFOG00015008156	safb	99	63.740	ENSAPEG00000023342	safb	99	63.284	Amphiprion_percula
ENSSFOG00015008156	safb	99	64.753	ENSATEG00000004998	safb	99	64.294	Anabas_testudineus
ENSSFOG00015008156	safb	61	45.611	ENSAPLG00000005780	-	98	47.550	Anas_platyrhynchos
ENSSFOG00015008156	safb	61	48.925	ENSAPLG00000006355	-	99	52.386	Anas_platyrhynchos
ENSSFOG00015008156	safb	95	46.246	ENSANAG00000028821	SAFB	95	44.635	Aotus_nancymaae
ENSSFOG00015008156	safb	99	61.345	ENSACLG00000001926	safb	99	61.565	Astatotilapia_calliptera
ENSSFOG00015008156	safb	98	65.557	ENSAMXG00000018154	safb	100	65.775	Astyanax_mexicanus
ENSSFOG00015008156	safb	95	46.652	ENSBTAG00000007875	SAFB	95	43.550	Bos_taurus
ENSSFOG00015008156	safb	55	61.594	ENSCJAG00000017081	SAFB	94	61.594	Callithrix_jacchus
ENSSFOG00015008156	safb	67	46.372	ENSCAFG00000018803	SAFB	83	44.468	Canis_familiaris
ENSSFOG00015008156	safb	67	45.984	ENSCAFG00020018943	SAFB	95	44.313	Canis_lupus_dingo
ENSSFOG00015008156	safb	98	44.865	ENSCHIG00000007262	SAFB	96	43.370	Capra_hircus
ENSSFOG00015008156	safb	95	46.804	ENSCCAG00000020193	SAFB	95	45.016	Cebus_capucinus
ENSSFOG00015008156	safb	89	46.315	ENSCATG00000029994	SAFB	95	44.480	Cercocebus_atys
ENSSFOG00015008156	safb	65	44.849	ENSCLAG00000007734	SAFB	96	46.203	Chinchilla_lanigera
ENSSFOG00015008156	safb	89	46.315	ENSCSAG00000009949	SAFB	95	44.480	Chlorocebus_sabaeus
ENSSFOG00015008156	safb	65	59.259	ENSCHOG00000003208	SAFB	88	40.847	Choloepus_hoffmanni
ENSSFOG00015008156	safb	91	50.056	ENSCPBG00000010936	-	97	50.616	Chrysemys_picta_bellii
ENSSFOG00015008156	safb	92	47.717	ENSCPBG00000010928	-	98	48.402	Chrysemys_picta_bellii
ENSSFOG00015008156	safb	95	40.930	ENSCANG00000004774	-	95	46.982	Colobus_angolensis_palliatus
ENSSFOG00015008156	safb	95	44.878	ENSCANG00000019754	-	64	44.224	Colobus_angolensis_palliatus
ENSSFOG00015008156	safb	65	44.849	ENSCGRG00001002254	Safb	95	43.189	Cricetulus_griseus_chok1gshd
ENSSFOG00015008156	safb	58	40.271	ENSCGRG00000011529	Safb	94	40.154	Cricetulus_griseus_crigri
ENSSFOG00015008156	safb	66	52.787	ENSCSEG00000019870	safb	100	57.407	Cynoglossus_semilaevis
ENSSFOG00015008156	safb	99	55.671	ENSCVAG00000002226	safb	99	56.366	Cyprinodon_variegatus
ENSSFOG00015008156	safb	98	64.959	ENSDARG00000020467	safb	99	65.045	Danio_rerio
ENSSFOG00015008156	safb	67	47.476	ENSDNOG00000015746	SAFB	95	43.101	Dasypus_novemcinctus
ENSSFOG00015008156	safb	65	45.166	ENSDORG00000016200	Safb	95	42.440	Dipodomys_ordii
ENSSFOG00015008156	safb	50	59.524	ENSETEG00000018679	SAFB	65	53.138	Echinops_telfairi
ENSSFOG00015008156	safb	65	45.645	ENSEASG00005023019	SAFB	97	44.632	Equus_asinus_asinus
ENSSFOG00015008156	safb	65	46.353	ENSECAG00000018659	SAFB	85	43.910	Equus_caballus
ENSSFOG00015008156	safb	100	65.350	ENSELUG00000022327	safb	100	65.914	Esox_lucius
ENSSFOG00015008156	safb	67	46.445	ENSFCAG00000011835	SAFB	95	44.313	Felis_catus
ENSSFOG00015008156	safb	65	47.967	ENSFALG00000013882	-	87	48.927	Ficedula_albicollis
ENSSFOG00015008156	safb	58	45.502	ENSFALG00000013881	-	99	50.055	Ficedula_albicollis
ENSSFOG00015008156	safb	83	47.429	ENSFDAG00000020306	SAFB	99	45.685	Fukomys_damarensis
ENSSFOG00015008156	safb	99	57.010	ENSFHEG00000004219	safb	99	57.572	Fundulus_heteroclitus
ENSSFOG00015008156	safb	100	57.355	ENSGMOG00000014280	safb	99	59.609	Gadus_morhua
ENSSFOG00015008156	safb	67	48.788	ENSGALG00000001948	-	100	50.765	Gallus_gallus
ENSSFOG00015008156	safb	67	47.806	ENSGALG00000013365	-	98	48.901	Gallus_gallus
ENSSFOG00015008156	safb	99	55.022	ENSGAFG00000016162	safb	99	54.069	Gambusia_affinis
ENSSFOG00015008156	safb	99	60.596	ENSGACG00000011385	safb	99	59.659	Gasterosteus_aculeatus
ENSSFOG00015008156	safb	70	49.085	ENSGAGG00000017702	-	97	50.533	Gopherus_agassizii
ENSSFOG00015008156	safb	93	52.260	ENSGAGG00000008424	-	97	52.370	Gopherus_agassizii
ENSSFOG00015008156	safb	95	45.996	ENSGGOG00000015109	SAFB	95	44.480	Gorilla_gorilla
ENSSFOG00015008156	safb	99	52.457	ENSHBUG00000009218	safb	99	55.069	Haplochromis_burtoni
ENSSFOG00015008156	safb	65	45.469	ENSHGLG00000015883	SAFB	96	43.810	Heterocephalus_glaber_female
ENSSFOG00015008156	safb	98	38.889	ENSHGLG00100004228	SAFB	71	45.760	Heterocephalus_glaber_male
ENSSFOG00015008156	safb	94	56.295	ENSHCOG00000001705	safb	99	56.295	Hippocampus_comes
ENSSFOG00015008156	safb	100	64.699	ENSIPUG00000024869	safb2	100	66.667	Ictalurus_punctatus
ENSSFOG00015008156	safb	61	44.237	ENSSTOG00000002783	SAFB	98	43.157	Ictidomys_tridecemlineatus
ENSSFOG00015008156	safb	65	45.512	ENSJJAG00000009021	Safb	96	43.816	Jaculus_jaculus
ENSSFOG00015008156	safb	99	60.276	ENSKMAG00000022308	safb	99	60.620	Kryptolebias_marmoratus
ENSSFOG00015008156	safb	99	62.783	ENSLBEG00000006015	safb	99	62.571	Labrus_bergylta
ENSSFOG00015008156	safb	67	46.142	ENSLACG00000018090	SAFB	98	52.687	Latimeria_chalumnae
ENSSFOG00015008156	safb	98	74.884	ENSLOCG00000003613	safb	99	75.814	Lepisosteus_oculatus
ENSSFOG00015008156	safb	95	45.113	ENSLAFG00000003840	SAFB	96	44.894	Loxodonta_africana
ENSSFOG00015008156	safb	95	46.804	ENSMFAG00000003885	SAFB	95	44.754	Macaca_fascicularis
ENSSFOG00015008156	safb	95	46.246	ENSMMUG00000017970	SAFB	95	44.480	Macaca_mulatta
ENSSFOG00015008156	safb	89	45.133	ENSMNEG00000035637	SAFB	95	42.949	Macaca_nemestrina
ENSSFOG00015008156	safb	66	42.880	ENSMLEG00000038637	SAFB	95	42.611	Mandrillus_leucophaeus
ENSSFOG00015008156	safb	99	63.348	ENSMAMG00000003357	safb	91	63.307	Mastacembelus_armatus
ENSSFOG00015008156	safb	99	62.316	ENSMZEG00005009120	safb	99	62.514	Maylandia_zebra
ENSSFOG00015008156	safb	93	44.544	ENSMGAG00000001101	-	95	47.811	Meleagris_gallopavo
ENSSFOG00015008156	safb	67	47.310	ENSMICG00000008739	-	97	45.117	Microcebus_murinus
ENSSFOG00015008156	safb	86	42.767	ENSMICG00000046795	-	71	68.116	Microcebus_murinus
ENSSFOG00015008156	safb	65	44.427	ENSMOCG00000014040	Safb	96	42.813	Microtus_ochrogaster
ENSSFOG00015008156	safb	97	47.720	ENSMODG00000001236	SAFB	97	44.917	Monodelphis_domestica
ENSSFOG00015008156	safb	99	62.171	ENSMALG00000020330	safb	99	62.171	Monopterus_albus
ENSSFOG00015008156	safb	67	45.656	ENSMPUG00000006123	SAFB	90	43.897	Mustela_putorius_furo
ENSSFOG00015008156	safb	98	46.360	ENSMLUG00000001081	SAFB	96	43.743	Myotis_lucifugus
ENSSFOG00015008156	safb	95	49.451	ENSNLEG00000013551	SAFB	97	47.287	Nomascus_leucogenys
ENSSFOG00015008156	safb	61	43.554	ENSOPRG00000011561	-	99	41.852	Ochotona_princeps
ENSSFOG00015008156	safb	65	44.849	ENSODEG00000014838	SAFB	96	43.730	Octodon_degus
ENSSFOG00015008156	safb	99	61.975	ENSONIG00000002318	safb	99	62.171	Oreochromis_niloticus
ENSSFOG00015008156	safb	87	44.219	ENSOCUG00000014628	SAFB	62	46.197	Oryctolagus_cuniculus
ENSSFOG00015008156	safb	97	58.030	ENSORLG00000016989	safb	99	56.897	Oryzias_latipes
ENSSFOG00015008156	safb	97	52.934	ENSORLG00020000404	safb	99	52.535	Oryzias_latipes_hni
ENSSFOG00015008156	safb	97	58.148	ENSORLG00015010733	safb	99	57.143	Oryzias_latipes_hsok
ENSSFOG00015008156	safb	99	58.824	ENSOMEG00000009066	safb	99	57.652	Oryzias_melastigma
ENSSFOG00015008156	safb	65	46.992	ENSOGAG00000027769	SAFB	97	44.089	Otolemur_garnettii
ENSSFOG00015008156	safb	82	43.176	ENSOARG00000007856	-	100	41.415	Ovis_aries
ENSSFOG00015008156	safb	95	43.407	ENSOARG00000007662	-	95	42.605	Ovis_aries
ENSSFOG00015008156	safb	95	46.587	ENSPPAG00000035129	SAFB	95	44.647	Pan_paniscus
ENSSFOG00015008156	safb	67	46.445	ENSPPRG00000017197	SAFB	95	44.313	Panthera_pardus
ENSSFOG00015008156	safb	95	46.587	ENSPTRG00000010335	SAFB	95	44.647	Pan_troglodytes
ENSSFOG00015008156	safb	89	42.969	ENSPANG00000007770	SAFB	95	44.802	Papio_anubis
ENSSFOG00015008156	safb	100	83.447	ENSPKIG00000009902	safb	100	83.447	Paramormyrops_kingsleyae
ENSSFOG00015008156	safb	97	49.787	ENSPSIG00000009367	-	95	49.413	Pelodiscus_sinensis
ENSSFOG00015008156	safb	97	49.679	ENSPSIG00000011679	-	98	50.664	Pelodiscus_sinensis
ENSSFOG00015008156	safb	57	50.640	ENSPCIG00000009504	-	99	48.148	Phascolarctos_cinereus
ENSSFOG00015008156	safb	99	57.061	ENSPFOG00000007745	safb	99	56.651	Poecilia_formosa
ENSSFOG00015008156	safb	99	54.636	ENSPLAG00000001614	safb	99	54.405	Poecilia_latipinna
ENSSFOG00015008156	safb	99	56.831	ENSPMEG00000021023	safb	99	56.422	Poecilia_mexicana
ENSSFOG00015008156	safb	99	56.122	ENSPREG00000012496	safb	99	55.756	Poecilia_reticulata
ENSSFOG00015008156	safb	89	46.086	ENSPPYG00000009428	SAFB	95	44.361	Pongo_abelii
ENSSFOG00015008156	safb	92	41.943	ENSPCAG00000006475	SAFB	95	40.803	Procavia_capensis
ENSSFOG00015008156	safb	95	45.545	ENSPCOG00000014090	SAFB	64	46.809	Propithecus_coquereli
ENSSFOG00015008156	safb	86	60.550	ENSPVAG00000004913	SAFB	97	39.979	Pteropus_vampyrus
ENSSFOG00015008156	safb	100	67.119	ENSPNAG00000021838	safb	100	67.797	Pygocentrus_nattereri
ENSSFOG00015008156	safb	95	44.181	ENSRBIG00000042509	SAFB	95	42.188	Rhinopithecus_bieti
ENSSFOG00015008156	safb	95	46.696	ENSRROG00000029278	SAFB	95	44.647	Rhinopithecus_roxellana
ENSSFOG00015008156	safb	95	46.572	ENSSBOG00000026291	SAFB	95	44.779	Saimiri_boliviensis_boliviensis
ENSSFOG00015008156	safb	99	65.098	ENSSMAG00000009316	safb	99	64.719	Scophthalmus_maximus
ENSSFOG00015008156	safb	99	62.630	ENSSDUG00000009652	safb	99	62.946	Seriola_dumerili
ENSSFOG00015008156	safb	99	64.147	ENSSLDG00000001670	safb	99	64.097	Seriola_lalandi_dorsalis
ENSSFOG00015008156	safb	61	44.112	ENSSARG00000010475	SAFB	98	40.382	Sorex_araneus
ENSSFOG00015008156	safb	53	45.977	ENSSPUG00000009820	-	99	48.585	Sphenodon_punctatus
ENSSFOG00015008156	safb	58	43.716	ENSSPUG00000009747	-	100	41.943	Sphenodon_punctatus
ENSSFOG00015008156	safb	99	59.264	ENSSPAG00000015682	safb	99	60.140	Stegastes_partitus
ENSSFOG00015008156	safb	95	46.456	ENSSSCG00000013522	SAFB	96	44.763	Sus_scrofa
ENSSFOG00015008156	safb	67	47.123	ENSTGUG00000000489	-	96	53.379	Taeniopygia_guttata
ENSSFOG00015008156	safb	65	47.145	ENSTGUG00000000502	-	97	48.670	Taeniopygia_guttata
ENSSFOG00015008156	safb	99	60.321	ENSTRUG00000003567	safb	99	60.894	Takifugu_rubripes
ENSSFOG00015008156	safb	91	51.515	ENSTNIG00000015470	safb	100	52.558	Tetraodon_nigroviridis
ENSSFOG00015008156	safb	81	73.684	ENSTTRG00000013588	SAFB	89	73.684	Tursiops_truncatus
ENSSFOG00015008156	safb	74	45.634	ENSUMAG00000009734	SAFB	85	46.281	Ursus_maritimus
ENSSFOG00015008156	safb	69	54.755	ENSVPAG00000012043	SAFB	75	47.175	Vicugna_pacos
ENSSFOG00015008156	safb	67	46.057	ENSVVUG00000013720	SAFB	83	44.373	Vulpes_vulpes
ENSSFOG00015008156	safb	65	46.321	ENSXETG00000008755	safb	97	47.712	Xenopus_tropicalis
ENSSFOG00015008156	safb	99	57.274	ENSXMAG00000003458	safb	99	57.208	Xiphophorus_maculatus