EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008229 (Gene tree)
Gene ID: 108922981
Gene Symbol: rbmx
Alias: fc66e11|wu:fb37c07|wu:fc66e11
Full Name: RNA-binding motif protein%2C X chromosome-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6359 bases
Position: chrKV410820.1:6797038-6803396
Accession: 108922981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015012772	RBM1CTR	PF08081.11	3.9e-19	1	1
ENSSFOP00015012783	RBM1CTR	PF08081.11	3.9e-19	1	1
ENSSFOP00015012772	RRM_1	PF00076.22	2.1e-24	1	1
ENSSFOP00015012783	RRM_1	PF00076.22	2.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015012933	-	3839	XM_018733411	ENSSFOP00015012772	381 (aa)	XP_018588927	A0A1W4YKH0
ENSSFOT00015012944	-	3293	XM_018733413	ENSSFOP00015012783	381 (aa)	XP_018588929	A0A1W4YKH0

Gene Model

Click here to download ENSSFOG00015008229's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008229	rbmx	100	81.234	ENSSFOG00015011749	-	100	76.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008229	rbmx	94	85.054	ENSAPOG00000006496	rbmx	94	82.609	Acanthochromis_polyacanthus
ENSSFOG00015008229	rbmx	91	74.792	ENSACIG00000011598	rbmx	88	77.586	Amphilophus_citrinellus
ENSSFOG00015008229	rbmx	93	83.662	ENSACIG00000011576	rbmx	94	84.123	Amphilophus_citrinellus
ENSSFOG00015008229	rbmx	93	82.609	ENSAOCG00000020930	rbmx	94	82.258	Amphiprion_ocellaris
ENSSFOG00015008229	rbmx	100	81.519	ENSAPEG00000007316	rbmx	95	82.258	Amphiprion_percula
ENSSFOG00015008229	rbmx	93	83.944	ENSATEG00000017363	rbmx	94	84.401	Anabas_testudineus
ENSSFOG00015008229	rbmx	100	82.234	ENSACLG00000000098	rbmx	94	82.480	Astatotilapia_calliptera
ENSSFOG00015008229	rbmx	92	86.592	ENSAMXG00000019990	rbmx	94	83.747	Astyanax_mexicanus
ENSSFOG00015008229	rbmx	93	82.880	ENSCSEG00000005240	rbmx	94	81.989	Cynoglossus_semilaevis
ENSSFOG00015008229	rbmx	93	83.791	ENSCVAG00000008876	rbmx	94	79.837	Cyprinodon_variegatus
ENSSFOG00015008229	rbmx	92	83.853	ENSDARG00000014244	rbmx	100	83.621	Danio_rerio
ENSSFOG00015008229	rbmx	96	53.488	ENSEBUG00000006778	rbmx	99	52.330	Eptatretus_burgeri
ENSSFOG00015008229	rbmx	94	82.480	ENSELUG00000003600	rbmx	100	81.429	Esox_lucius
ENSSFOG00015008229	rbmx	93	83.516	ENSFHEG00000016764	rbmx	94	80.654	Fundulus_heteroclitus
ENSSFOG00015008229	rbmx	100	78.554	ENSGMOG00000004496	rbmx	94	69.487	Gadus_morhua
ENSSFOG00015008229	rbmx	93	82.692	ENSGAFG00000019917	rbmx	80	95.833	Gambusia_affinis
ENSSFOG00015008229	rbmx	93	80.645	ENSGACG00000017237	rbmx	94	80.053	Gasterosteus_aculeatus
ENSSFOG00015008229	rbmx	100	82.487	ENSHBUG00000015283	rbmx	94	82.749	Haplochromis_burtoni
ENSSFOG00015008229	rbmx	93	77.507	ENSHCOG00000001111	rbmx	100	74.227	Hippocampus_comes
ENSSFOG00015008229	rbmx	100	81.395	ENSIPUG00000022212	rbmx	94	80.769	Ictalurus_punctatus
ENSSFOG00015008229	rbmx	93	84.890	ENSKMAG00000001754	rbmx	100	79.021	Kryptolebias_marmoratus
ENSSFOG00015008229	rbmx	93	85.515	ENSLBEG00000010000	rbmx	94	85.399	Labrus_bergylta
ENSSFOG00015008229	rbmx	93	70.541	ENSLACG00000015261	rbmx	94	69.786	Latimeria_chalumnae
ENSSFOG00015008229	rbmx	100	85.536	ENSLOCG00000015142	rbmx	100	82.793	Lepisosteus_oculatus
ENSSFOG00015008229	rbmx	93	83.696	ENSMAMG00000020591	rbmx	94	82.796	Mastacembelus_armatus
ENSSFOG00015008229	rbmx	90	83.099	ENSMZEG00005006432	rbmx	87	81.972	Maylandia_zebra
ENSSFOG00015008229	rbmx	93	84.196	ENSMMOG00000001043	rbmx	94	81.892	Mola_mola
ENSSFOG00015008229	rbmx	93	76.359	ENSMALG00000009777	rbmx	94	76.075	Monopterus_albus
ENSSFOG00015008229	rbmx	100	82.487	ENSNBRG00000022154	rbmx	94	82.749	Neolamprologus_brichardi
ENSSFOG00015008229	rbmx	100	82.025	ENSONIG00000002700	rbmx	94	82.258	Oreochromis_niloticus
ENSSFOG00015008229	rbmx	100	83.081	ENSORLG00000001692	rbmx	94	80.429	Oryzias_latipes
ENSSFOG00015008229	rbmx	100	83.333	ENSORLG00020021132	rbmx	94	79.893	Oryzias_latipes_hni
ENSSFOG00015008229	rbmx	100	82.576	ENSORLG00015000330	rbmx	94	79.625	Oryzias_latipes_hsok
ENSSFOG00015008229	rbmx	100	81.818	ENSOMEG00000016787	rbmx	100	78.351	Oryzias_melastigma
ENSSFOG00015008229	rbmx	100	75.452	ENSPKIG00000017611	rbmx	94	73.098	Paramormyrops_kingsleyae
ENSSFOG00015008229	rbmx	100	87.500	ENSPKIG00000024910	-	100	85.117	Paramormyrops_kingsleyae
ENSSFOG00015008229	rbmx	91	82.997	ENSPMGG00000017906	rbmx	96	78.552	Periophthalmus_magnuspinnatus
ENSSFOG00015008229	rbmx	93	82.692	ENSPFOG00000013193	rbmx	94	78.747	Poecilia_formosa
ENSSFOG00015008229	rbmx	93	82.967	ENSPLAG00000010472	rbmx	94	79.019	Poecilia_latipinna
ENSSFOG00015008229	rbmx	93	82.692	ENSPMEG00000007579	rbmx	94	78.747	Poecilia_mexicana
ENSSFOG00015008229	rbmx	93	82.418	ENSPREG00000010279	rbmx	94	78.474	Poecilia_reticulata
ENSSFOG00015008229	rbmx	100	82.487	ENSPNYG00000012536	rbmx	94	82.749	Pundamilia_nyererei
ENSSFOG00015008229	rbmx	92	86.034	ENSPNAG00000019648	rbmx	100	83.721	Pygocentrus_nattereri
ENSSFOG00015008229	rbmx	93	83.333	ENSSMAG00000014636	rbmx	94	81.622	Scophthalmus_maximus
ENSSFOG00015008229	rbmx	93	83.152	ENSSDUG00000000242	rbmx	94	82.796	Seriola_dumerili
ENSSFOG00015008229	rbmx	93	83.152	ENSSLDG00000021381	rbmx	94	82.796	Seriola_lalandi_dorsalis
ENSSFOG00015008229	rbmx	94	80.688	ENSSPAG00000008582	rbmx	94	81.989	Stegastes_partitus
ENSSFOG00015008229	rbmx	94	81.351	ENSTRUG00000006031	rbmx	94	81.351	Takifugu_rubripes
ENSSFOG00015008229	rbmx	93	83.565	ENSTNIG00000016844	rbmx	94	83.196	Tetraodon_nigroviridis
ENSSFOG00015008229	rbmx	66	58.687	ENSUAMG00000011752	-	87	55.508	Ursus_americanus
ENSSFOG00015008229	rbmx	66	58.687	ENSUMAG00000019276	-	87	55.508	Ursus_maritimus
ENSSFOG00015008229	rbmx	93	56.011	ENSXETG00000003481	rbmx	94	52.846	Xenopus_tropicalis
ENSSFOG00015008229	rbmx	91	75.775	ENSXCOG00000016084	rbmx	92	75.097	Xiphophorus_couchianus
ENSSFOG00015008229	rbmx	93	82.418	ENSXMAG00000013407	rbmx	94	78.747	Xiphophorus_maculatus