EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008483 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 10268 bases
Position: chrKV411212.1:6401306-6411573
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015013241	ResIII	PF04851.15	8.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015013406	-	1842	-	ENSSFOP00015013241	613 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015008483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008483	rad54b	77	33.932	ENSSFOG00015003649	chd1l	53	33.932
ENSSFOG00015008483	rad54b	74	30.137	ENSSFOG00015020909	smarcad1a	64	30.137
ENSSFOG00015008483	rad54b	72	36.364	ENSSFOG00015017895	hells	54	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008483	rad54b	88	65.614	ENSG00000265817	FSBP	79	65.614	Homo_sapiens
ENSSFOG00015008483	rad54b	88	65.614	ENSG00000197275	RAD54B	63	65.614	Homo_sapiens
ENSSFOG00015008483	rad54b	91	64.966	ENSAMEG00000005834	-	65	64.966	Ailuropoda_melanoleuca
ENSSFOG00015008483	rad54b	89	70.928	ENSACIG00000013005	rad54b	65	70.928	Amphilophus_citrinellus
ENSSFOG00015008483	rad54b	89	71.303	ENSAOCG00000008523	rad54b	61	71.303	Amphiprion_ocellaris
ENSSFOG00015008483	rad54b	90	70.557	ENSAPEG00000001673	rad54b	65	71.454	Amphiprion_percula
ENSSFOG00015008483	rad54b	89	70.599	ENSATEG00000001527	rad54b	66	71.479	Anabas_testudineus
ENSSFOG00015008483	rad54b	96	65.113	ENSAPLG00000014366	-	68	65.113	Anas_platyrhynchos
ENSSFOG00015008483	rad54b	92	64.597	ENSACAG00000003671	-	75	64.597	Anolis_carolinensis
ENSSFOG00015008483	rad54b	88	64.035	ENSANAG00000019528	-	88	64.035	Aotus_nancymaae
ENSSFOG00015008483	rad54b	89	71.781	ENSACLG00000007826	rad54b	66	71.781	Astatotilapia_calliptera
ENSSFOG00015008483	rad54b	92	68.601	ENSAMXG00000039985	rad54b	72	68.411	Astyanax_mexicanus
ENSSFOG00015008483	rad54b	91	64.736	ENSBTAG00000000632	RAD54B	65	64.736	Bos_taurus
ENSSFOG00015008483	rad54b	85	40.768	WBGene00013792	Y116A8C.13	70	41.002	Caenorhabditis_elegans
ENSSFOG00015008483	rad54b	88	65.789	ENSCJAG00000000080	-	79	65.789	Callithrix_jacchus
ENSSFOG00015008483	rad54b	92	64.775	ENSCAFG00000009179	RAD54B	65	64.775	Canis_familiaris
ENSSFOG00015008483	rad54b	91	65.646	ENSCAFG00020012084	-	64	65.646	Canis_lupus_dingo
ENSSFOG00015008483	rad54b	91	64.736	ENSCHIG00000008230	-	65	64.736	Capra_hircus
ENSSFOG00015008483	rad54b	89	64.522	ENSTSYG00000013234	-	63	64.522	Carlito_syrichta
ENSSFOG00015008483	rad54b	88	65.263	ENSCPOG00000011643	-	63	65.263	Cavia_porcellus
ENSSFOG00015008483	rad54b	88	65.614	ENSCCAG00000011754	-	79	65.614	Cebus_capucinus
ENSSFOG00015008483	rad54b	88	65.202	ENSCATG00000030661	-	79	65.202	Cercocebus_atys
ENSSFOG00015008483	rad54b	88	65.088	ENSCLAG00000010476	-	64	65.088	Chinchilla_lanigera
ENSSFOG00015008483	rad54b	88	65.026	ENSCSAG00000012712	-	63	65.026	Chlorocebus_sabaeus
ENSSFOG00015008483	rad54b	96	64.423	ENSCPBG00000003204	-	67	68.366	Chrysemys_picta_bellii
ENSSFOG00015008483	rad54b	88	65.202	ENSCANG00000017939	-	79	65.202	Colobus_angolensis_palliatus
ENSSFOG00015008483	rad54b	88	65.493	ENSCGRG00001020184	Rad54b	65	65.493	Cricetulus_griseus_chok1gshd
ENSSFOG00015008483	rad54b	88	64.261	ENSCGRG00000016752	Rad54b	64	64.261	Cricetulus_griseus_crigri
ENSSFOG00015008483	rad54b	89	70.070	ENSCSEG00000001601	rad54b	67	70.070	Cynoglossus_semilaevis
ENSSFOG00015008483	rad54b	89	72.438	ENSCVAG00000009200	rad54b	65	72.438	Cyprinodon_variegatus
ENSSFOG00015008483	rad54b	90	68.467	ENSDARG00000092134	rad54b	90	67.938	Danio_rerio
ENSSFOG00015008483	rad54b	92	64.262	ENSDNOG00000015535	-	65	64.262	Dasypus_novemcinctus
ENSSFOG00015008483	rad54b	88	65.439	ENSDORG00000002492	Rad54b	65	65.789	Dipodomys_ordii
ENSSFOG00015008483	rad54b	81	65.076	ENSETEG00000010605	-	67	65.076	Echinops_telfairi
ENSSFOG00015008483	rad54b	89	57.785	ENSEBUG00000009104	rad54b	64	57.785	Eptatretus_burgeri
ENSSFOG00015008483	rad54b	93	63.500	ENSEASG00005004021	-	68	63.500	Equus_asinus_asinus
ENSSFOG00015008483	rad54b	93	63.500	ENSECAG00000021949	-	70	63.606	Equus_caballus
ENSSFOG00015008483	rad54b	69	63.590	ENSEEUG00000008056	-	56	61.607	Erinaceus_europaeus
ENSSFOG00015008483	rad54b	89	70.351	ENSELUG00000009287	rad54b	61	70.351	Esox_lucius
ENSSFOG00015008483	rad54b	91	65.306	ENSFCAG00000015513	-	81	65.306	Felis_catus
ENSSFOG00015008483	rad54b	93	66.391	ENSFALG00000005467	-	65	66.391	Ficedula_albicollis
ENSSFOG00015008483	rad54b	88	64.737	ENSFDAG00000020541	-	63	64.737	Fukomys_damarensis
ENSSFOG00015008483	rad54b	89	71.250	ENSFHEG00000014382	rad54b	65	69.244	Fundulus_heteroclitus
ENSSFOG00015008483	rad54b	89	69.542	ENSGMOG00000014774	rad54b	71	69.542	Gadus_morhua
ENSSFOG00015008483	rad54b	88	68.421	ENSGALG00000043597	RAD54B	62	68.421	Gallus_gallus
ENSSFOG00015008483	rad54b	89	71.529	ENSGAFG00000007901	rad54b	67	71.378	Gambusia_affinis
ENSSFOG00015008483	rad54b	89	70.826	ENSGACG00000009128	rad54b	62	70.826	Gasterosteus_aculeatus
ENSSFOG00015008483	rad54b	96	64.423	ENSGAGG00000018747	-	67	64.423	Gopherus_agassizii
ENSSFOG00015008483	rad54b	88	65.614	ENSGGOG00000023516	-	63	65.614	Gorilla_gorilla
ENSSFOG00015008483	rad54b	89	71.655	ENSHBUG00000016017	rad54b	61	71.655	Haplochromis_burtoni
ENSSFOG00015008483	rad54b	88	64.410	ENSHGLG00000008263	RAD54B	62	64.410	Heterocephalus_glaber_female
ENSSFOG00015008483	rad54b	88	63.402	ENSHGLG00100008108	-	63	63.402	Heterocephalus_glaber_male
ENSSFOG00015008483	rad54b	90	69.312	ENSHCOG00000004764	rad54b	74	65.821	Hippocampus_comes
ENSSFOG00015008483	rad54b	95	66.393	ENSIPUG00000018531	rad54b	65	66.393	Ictalurus_punctatus
ENSSFOG00015008483	rad54b	93	62.810	ENSSTOG00000010791	-	66	62.810	Ictidomys_tridecemlineatus
ENSSFOG00015008483	rad54b	88	66.667	ENSJJAG00000010314	Rad54b	62	66.667	Jaculus_jaculus
ENSSFOG00015008483	rad54b	89	70.351	ENSKMAG00000004744	rad54b	67	70.351	Kryptolebias_marmoratus
ENSSFOG00015008483	rad54b	92	67.224	ENSLACG00000000859	-	80	67.224	Latimeria_chalumnae
ENSSFOG00015008483	rad54b	90	75.475	ENSLOCG00000010100	rad54b	69	75.086	Lepisosteus_oculatus
ENSSFOG00015008483	rad54b	91	63.946	ENSLAFG00000015315	-	73	63.946	Loxodonta_africana
ENSSFOG00015008483	rad54b	88	65.202	ENSMFAG00000031629	-	79	65.202	Macaca_fascicularis
ENSSFOG00015008483	rad54b	88	65.202	ENSMMUG00000005659	-	63	65.202	Macaca_mulatta
ENSSFOG00015008483	rad54b	88	65.202	ENSMNEG00000016408	-	64	65.202	Macaca_nemestrina
ENSSFOG00015008483	rad54b	88	65.202	ENSMLEG00000006946	-	63	65.202	Mandrillus_leucophaeus
ENSSFOG00015008483	rad54b	88	70.578	ENSMAMG00000012269	rad54b	65	70.578	Mastacembelus_armatus
ENSSFOG00015008483	rad54b	89	71.655	ENSMZEG00005005281	rad54b	68	71.605	Maylandia_zebra
ENSSFOG00015008483	rad54b	88	68.596	ENSMGAG00000012024	-	62	68.596	Meleagris_gallopavo
ENSSFOG00015008483	rad54b	88	65.317	ENSMAUG00000013586	Rad54b	64	65.317	Mesocricetus_auratus
ENSSFOG00015008483	rad54b	89	65.217	ENSMICG00000000754	-	66	65.217	Microcebus_murinus
ENSSFOG00015008483	rad54b	92	63.880	ENSMOCG00000020035	Rad54b	67	63.880	Microtus_ochrogaster
ENSSFOG00015008483	rad54b	85	71.612	ENSMMOG00000003394	rad54b	62	71.612	Mola_mola
ENSSFOG00015008483	rad54b	88	66.138	ENSMODG00000007343	-	70	66.138	Monodelphis_domestica
ENSSFOG00015008483	rad54b	83	73.408	ENSMALG00000001520	rad54b	85	73.408	Monopterus_albus
ENSSFOG00015008483	rad54b	88	64.737	MGP_CAROLIEiJ_G0025810	Rad54b	64	65.088	Mus_caroli
ENSSFOG00015008483	rad54b	88	64.737	ENSMUSG00000078773	Rad54b	64	64.737	Mus_musculus
ENSSFOG00015008483	rad54b	88	64.386	MGP_PahariEiJ_G0023933	Rad54b	64	64.737	Mus_pahari
ENSSFOG00015008483	rad54b	88	65.088	MGP_SPRETEiJ_G0026758	Rad54b	64	65.088	Mus_spretus
ENSSFOG00015008483	rad54b	94	63.054	ENSMPUG00000008878	-	75	63.054	Mustela_putorius_furo
ENSSFOG00015008483	rad54b	96	62.802	ENSMLUG00000008953	-	68	62.802	Myotis_lucifugus
ENSSFOG00015008483	rad54b	89	64.000	ENSNGAG00000017537	Rad54b	64	64.348	Nannospalax_galili
ENSSFOG00015008483	rad54b	89	72.007	ENSNBRG00000013394	rad54b	66	72.007	Neolamprologus_brichardi
ENSSFOG00015008483	rad54b	88	65.439	ENSNLEG00000003062	-	78	65.439	Nomascus_leucogenys
ENSSFOG00015008483	rad54b	88	64.386	ENSODEG00000019564	-	63	64.386	Octodon_degus
ENSSFOG00015008483	rad54b	92	62.075	ENSODEG00000002650	-	77	64.561	Octodon_degus
ENSSFOG00015008483	rad54b	89	71.831	ENSONIG00000006067	rad54b	62	71.831	Oreochromis_niloticus
ENSSFOG00015008483	rad54b	88	67.725	ENSOANG00000011348	-	75	67.606	Ornithorhynchus_anatinus
ENSSFOG00015008483	rad54b	89	65.217	ENSOCUG00000016478	-	63	65.217	Oryctolagus_cuniculus
ENSSFOG00015008483	rad54b	89	71.831	ENSORLG00000008918	rad54b	89	71.030	Oryzias_latipes
ENSSFOG00015008483	rad54b	89	71.030	ENSORLG00020012171	rad54b	89	71.030	Oryzias_latipes_hni
ENSSFOG00015008483	rad54b	89	71.831	ENSORLG00015018536	rad54b	61	71.831	Oryzias_latipes_hsok
ENSSFOG00015008483	rad54b	89	72.535	ENSOMEG00000004345	rad54b	74	72.535	Oryzias_melastigma
ENSSFOG00015008483	rad54b	92	63.025	ENSOGAG00000007854	-	63	64.696	Otolemur_garnettii
ENSSFOG00015008483	rad54b	91	64.736	ENSOARG00000007691	-	72	64.736	Ovis_aries
ENSSFOG00015008483	rad54b	89	63.478	ENSPPAG00000029572	-	63	63.478	Pan_paniscus
ENSSFOG00015008483	rad54b	91	65.136	ENSPPRG00000007571	-	81	65.136	Panthera_pardus
ENSSFOG00015008483	rad54b	91	65.306	ENSPTIG00000012670	-	81	65.306	Panthera_tigris_altaica
ENSSFOG00015008483	rad54b	88	65.439	ENSPTRG00000020427	-	79	65.439	Pan_troglodytes
ENSSFOG00015008483	rad54b	88	65.202	ENSPANG00000019566	-	63	65.202	Papio_anubis
ENSSFOG00015008483	rad54b	89	78.472	ENSPKIG00000014974	rad54b	63	78.472	Paramormyrops_kingsleyae
ENSSFOG00015008483	rad54b	96	63.226	ENSPSIG00000002383	-	76	63.226	Pelodiscus_sinensis
ENSSFOG00015008483	rad54b	88	64.965	ENSPEMG00000012133	Rad54b	64	64.965	Peromyscus_maniculatus_bairdii
ENSSFOG00015008483	rad54b	89	64.623	ENSPMAG00000002916	rad54b	71	64.623	Petromyzon_marinus
ENSSFOG00015008483	rad54b	88	66.257	ENSPCIG00000020151	-	68	66.257	Phascolarctos_cinereus
ENSSFOG00015008483	rad54b	89	72.056	ENSPFOG00000023411	rad54b	61	72.056	Poecilia_formosa
ENSSFOG00015008483	rad54b	89	72.408	ENSPLAG00000010430	rad54b	61	72.408	Poecilia_latipinna
ENSSFOG00015008483	rad54b	89	72.281	ENSPMEG00000016873	rad54b	68	72.193	Poecilia_mexicana
ENSSFOG00015008483	rad54b	90	71.701	ENSPREG00000018443	rad54b	66	71.701	Poecilia_reticulata
ENSSFOG00015008483	rad54b	91	64.116	ENSPPYG00000018750	-	65	64.116	Pongo_abelii
ENSSFOG00015008483	rad54b	92	64.430	ENSPCOG00000026845	-	82	64.430	Propithecus_coquereli
ENSSFOG00015008483	rad54b	91	64.116	ENSPVAG00000000261	-	68	64.116	Pteropus_vampyrus
ENSSFOG00015008483	rad54b	89	71.454	ENSPNYG00000018303	rad54b	70	71.454	Pundamilia_nyererei
ENSSFOG00015008483	rad54b	90	70.228	ENSPNAG00000000295	rad54b	68	70.228	Pygocentrus_nattereri
ENSSFOG00015008483	rad54b	88	64.561	ENSRNOG00000039949	Rad54b	64	64.561	Rattus_norvegicus
ENSSFOG00015008483	rad54b	88	65.026	ENSRBIG00000020419	-	63	65.026	Rhinopithecus_bieti
ENSSFOG00015008483	rad54b	88	64.851	ENSRROG00000039897	-	63	64.851	Rhinopithecus_roxellana
ENSSFOG00015008483	rad54b	87	43.216	YBR073W	RDH54	59	43.328	Saccharomyces_cerevisiae
ENSSFOG00015008483	rad54b	88	65.614	ENSSBOG00000028501	-	63	65.614	Saimiri_boliviensis_boliviensis
ENSSFOG00015008483	rad54b	93	64.452	ENSSHAG00000017038	-	66	64.452	Sarcophilus_harrisii
ENSSFOG00015008483	rad54b	90	71.655	ENSSMAG00000018659	rad54b	66	71.655	Scophthalmus_maximus
ENSSFOG00015008483	rad54b	89	72.183	ENSSDUG00000001122	rad54b	60	72.183	Seriola_dumerili
ENSSFOG00015008483	rad54b	89	72.183	ENSSLDG00000013787	rad54b	66	67.430	Seriola_lalandi_dorsalis
ENSSFOG00015008483	rad54b	93	65.391	ENSSPUG00000016497	-	68	65.391	Sphenodon_punctatus
ENSSFOG00015008483	rad54b	89	71.103	ENSSPAG00000012800	rad54b	65	71.103	Stegastes_partitus
ENSSFOG00015008483	rad54b	91	64.395	ENSSSCG00000006101	-	74	64.395	Sus_scrofa
ENSSFOG00015008483	rad54b	93	66.337	ENSTGUG00000011880	-	65	66.337	Taeniopygia_guttata
ENSSFOG00015008483	rad54b	89	70.351	ENSTRUG00000010015	rad54b	61	70.351	Takifugu_rubripes
ENSSFOG00015008483	rad54b	92	58.893	ENSTTRG00000006312	-	65	59.455	Tursiops_truncatus
ENSSFOG00015008483	rad54b	91	64.966	ENSUMAG00000016401	-	65	64.966	Ursus_maritimus
ENSSFOG00015008483	rad54b	91	65.417	ENSVPAG00000003157	-	65	65.417	Vicugna_pacos
ENSSFOG00015008483	rad54b	91	53.231	ENSXETG00000025924	rad54b	73	53.231	Xenopus_tropicalis
ENSSFOG00015008483	rad54b	89	71.002	ENSXMAG00000013141	rad54b	66	71.002	Xiphophorus_maculatus