EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 10251 bases
Position: chrKV410801.1:5611840-5622090
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015013440	zf-C2H2	PF00096.26	4.7e-40	1	7
ENSSFOP00015013440	zf-C2H2	PF00096.26	4.7e-40	2	7
ENSSFOP00015013440	zf-C2H2	PF00096.26	4.7e-40	3	7
ENSSFOP00015013440	zf-C2H2	PF00096.26	4.7e-40	4	7
ENSSFOP00015013440	zf-C2H2	PF00096.26	4.7e-40	5	7
ENSSFOP00015013440	zf-C2H2	PF00096.26	4.7e-40	6	7
ENSSFOP00015013440	zf-C2H2	PF00096.26	4.7e-40	7	7
ENSSFOP00015013412	zf-C2H2	PF00096.26	3.8e-34	1	6
ENSSFOP00015013412	zf-C2H2	PF00096.26	3.8e-34	2	6
ENSSFOP00015013412	zf-C2H2	PF00096.26	3.8e-34	3	6
ENSSFOP00015013412	zf-C2H2	PF00096.26	3.8e-34	4	6
ENSSFOP00015013412	zf-C2H2	PF00096.26	3.8e-34	5	6
ENSSFOP00015013412	zf-C2H2	PF00096.26	3.8e-34	6	6
ENSSFOP00015013390	zf-C2H2	PF00096.26	1.8e-33	1	6
ENSSFOP00015013390	zf-C2H2	PF00096.26	1.8e-33	2	6
ENSSFOP00015013390	zf-C2H2	PF00096.26	1.8e-33	3	6
ENSSFOP00015013390	zf-C2H2	PF00096.26	1.8e-33	4	6
ENSSFOP00015013390	zf-C2H2	PF00096.26	1.8e-33	5	6
ENSSFOP00015013390	zf-C2H2	PF00096.26	1.8e-33	6	6
ENSSFOP00015013456	zf-C2H2	PF00096.26	1.4e-30	1	5
ENSSFOP00015013456	zf-C2H2	PF00096.26	1.4e-30	2	5
ENSSFOP00015013456	zf-C2H2	PF00096.26	1.4e-30	3	5
ENSSFOP00015013456	zf-C2H2	PF00096.26	1.4e-30	4	5
ENSSFOP00015013456	zf-C2H2	PF00096.26	1.4e-30	5	5
ENSSFOP00015013342	zf-C2H2	PF00096.26	5.9e-26	1	5
ENSSFOP00015013342	zf-C2H2	PF00096.26	5.9e-26	2	5
ENSSFOP00015013342	zf-C2H2	PF00096.26	5.9e-26	3	5
ENSSFOP00015013342	zf-C2H2	PF00096.26	5.9e-26	4	5
ENSSFOP00015013342	zf-C2H2	PF00096.26	5.9e-26	5	5
ENSSFOP00015013456	zf-met	PF12874.7	6.1e-14	1	2
ENSSFOP00015013456	zf-met	PF12874.7	6.1e-14	2	2
ENSSFOP00015013390	zf-met	PF12874.7	2.5e-12	1	2
ENSSFOP00015013390	zf-met	PF12874.7	2.5e-12	2	2
ENSSFOP00015013412	zf-met	PF12874.7	6.9e-10	1	2
ENSSFOP00015013412	zf-met	PF12874.7	6.9e-10	2	2
ENSSFOP00015013342	zf-met	PF12874.7	5.5e-08	1	2
ENSSFOP00015013342	zf-met	PF12874.7	5.5e-08	2	2
ENSSFOP00015013440	zf-met	PF12874.7	3.5e-05	1	2
ENSSFOP00015013440	zf-met	PF12874.7	3.5e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015013558	-	879	-	ENSSFOP00015013390	292 (aa)	-	-
ENSSFOT00015013508	-	879	-	ENSSFOP00015013342	292 (aa)	-	-
ENSSFOT00015013623	-	963	-	ENSSFOP00015013456	320 (aa)	-	-
ENSSFOT00015013607	-	768	-	ENSSFOP00015013440	255 (aa)	-	-
ENSSFOT00015013579	-	801	-	ENSSFOP00015013412	266 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015008577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008577	-	98	39.552	ENSSFOG00015012207	-	84	39.850
ENSSFOG00015008577	-	98	49.068	ENSSFOG00015023669	-	98	49.367
ENSSFOG00015008577	-	99	46.078	ENSSFOG00015008994	znf236	65	50.000
ENSSFOG00015008577	-	95	50.735	ENSSFOG00015001123	-	53	49.107
ENSSFOG00015008577	-	95	42.727	ENSSFOG00015008114	-	53	43.860
ENSSFOG00015008577	-	93	46.226	ENSSFOG00015011531	-	88	46.479
ENSSFOG00015008577	-	99	36.957	ENSSFOG00015004737	si:dkey-89b17.4	75	36.458
ENSSFOG00015008577	-	98	39.552	ENSSFOG00015023295	znf652	91	41.353
ENSSFOG00015008577	-	98	48.171	ENSSFOG00015021831	-	76	48.171
ENSSFOG00015008577	-	97	46.047	ENSSFOG00015013448	-	92	40.909
ENSSFOG00015008577	-	98	33.735	ENSSFOG00015013930	PRDM15	54	33.735
ENSSFOG00015008577	-	99	38.000	ENSSFOG00015021291	e4f1	54	46.377
ENSSFOG00015008577	-	97	45.413	ENSSFOG00015015958	-	57	44.118
ENSSFOG00015008577	-	98	47.826	ENSSFOG00015014778	znf526	53	47.826
ENSSFOG00015008577	-	95	39.175	ENSSFOG00015010128	ZNF521	70	39.175
ENSSFOG00015008577	-	83	35.000	ENSSFOG00015021578	snai1a	54	43.529
ENSSFOG00015008577	-	100	44.076	ENSSFOG00015012089	ZNF319	89	44.076
ENSSFOG00015008577	-	99	47.511	ENSSFOG00015010829	-	73	49.490
ENSSFOG00015008577	-	99	41.317	ENSSFOG00015020478	prdm5	79	43.605
ENSSFOG00015008577	-	97	43.590	ENSSFOG00015001195	SCRT1	59	43.137
ENSSFOG00015008577	-	99	44.792	ENSSFOG00015015878	-	95	50.000
ENSSFOG00015008577	-	98	49.215	ENSSFOG00015000652	ZNF775	83	50.000
ENSSFOG00015008577	-	99	36.316	ENSSFOG00015015427	znf366	56	34.802
ENSSFOG00015008577	-	99	35.983	ENSSFOG00015004064	-	52	35.983
ENSSFOG00015008577	-	86	37.778	ENSSFOG00015019679	-	76	37.778
ENSSFOG00015008577	-	95	35.321	ENSSFOG00015017155	-	87	38.679
ENSSFOG00015008577	-	96	35.196	ENSSFOG00015021699	si:ch211-166g5.4	63	35.583
ENSSFOG00015008577	-	96	42.857	ENSSFOG00015011566	gfi1b	58	42.857
ENSSFOG00015008577	-	98	44.664	ENSSFOG00015009678	-	57	49.444
ENSSFOG00015008577	-	99	49.537	ENSSFOG00015019818	-	82	47.368
ENSSFOG00015008577	-	98	44.318	ENSSFOG00015020993	-	78	44.318
ENSSFOG00015008577	-	88	52.632	ENSSFOG00015005557	-	71	52.632
ENSSFOG00015008577	-	94	39.252	ENSSFOG00015018025	SNAI2	54	45.000
ENSSFOG00015008577	-	95	39.623	ENSSFOG00015016115	snai3	50	39.623
ENSSFOG00015008577	-	98	45.833	ENSSFOG00015006108	-	57	47.959
ENSSFOG00015008577	-	99	45.267	ENSSFOG00015015384	-	85	50.000
ENSSFOG00015008577	-	94	33.929	ENSSFOG00015007599	ZNF521	73	32.394
ENSSFOG00015008577	-	99	43.860	ENSSFOG00015014678	znf341	55	48.936
ENSSFOG00015008577	-	98	45.339	ENSSFOG00015003121	znf668	90	45.213
ENSSFOG00015008577	-	99	43.462	ENSSFOG00015006083	-	61	48.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008577	-	95	44.340	ENSAOCG00000021436	-	53	44.340	Amphiprion_ocellaris
ENSSFOG00015008577	-	86	44.340	ENSAPEG00000007175	-	53	44.340	Amphiprion_percula
ENSSFOG00015008577	-	99	44.643	ENSATEG00000009436	-	85	46.875	Anabas_testudineus
ENSSFOG00015008577	-	93	45.882	ENSCVAG00000004222	-	53	48.810	Cyprinodon_variegatus
ENSSFOG00015008577	-	95	53.182	ENSCVAG00000019519	-	79	58.889	Cyprinodon_variegatus
ENSSFOG00015008577	-	97	73.077	ENSELUG00000009654	-	80	61.754	Esox_lucius
ENSSFOG00015008577	-	99	42.945	ENSHCOG00000002898	-	56	44.853	Hippocampus_comes
ENSSFOG00015008577	-	98	43.860	ENSKMAG00000011850	-	58	46.541	Kryptolebias_marmoratus
ENSSFOG00015008577	-	98	44.949	ENSLBEG00000011986	-	90	46.875	Labrus_bergylta
ENSSFOG00015008577	-	98	43.111	ENSONIG00000008984	-	98	48.125	Oreochromis_niloticus
ENSSFOG00015008577	-	90	49.320	ENSORLG00000016243	-	77	60.870	Oryzias_latipes
ENSSFOG00015008577	-	98	50.439	ENSORLG00015002548	-	77	60.870	Oryzias_latipes_hsok
ENSSFOG00015008577	-	87	57.426	ENSPFOG00000018462	-	95	57.426	Poecilia_formosa
ENSSFOG00015008577	-	98	46.970	ENSSMAG00000000056	-	55	50.331	Scophthalmus_maximus
ENSSFOG00015008577	-	98	45.312	ENSTRUG00000005880	-	54	46.753	Takifugu_rubripes
ENSSFOG00015008577	-	98	50.303	ENSXETG00000030249	-	59	52.941	Xenopus_tropicalis